Literature DB >> 25502731

A fast sensor for in vivo quantification of cytosolic phosphate in Saccharomyces cerevisiae.

Jinrui Zhang1, Tom Sassen, Angela ten Pierick, Cor Ras, Joseph J Heijnen, Sebastian Aljoscha Wahl.   

Abstract

Eukaryotic metabolism consists of a complex network of enzymatic reactions and transport processes which are distributed over different subcellular compartments. Currently, available metabolite measurement protocols allow to measure metabolite whole cell amounts which hinder progress to describe the in vivo dynamics in different compartments, which are driven by compartment specific concentrations. Phosphate (Pi) is an essential component for: (1) the metabolic balance of upper and lower glycolytic flux; (2) Together with ATP and ADP determines the phosphorylation energy. Especially, the cytosolic Pi has a critical role in disregulation of glycolysis in tps1 knockout. Here we developed a method that enables us to monitor the cytosolic Pi concentration in S. cerevisiae using an equilibrium sensor reaction: maltose + Pi < = > glucose + glucose-1-phosphate. The required enzyme, maltose phosphorylase from L. sanfranciscensis was overexpressed in S. cerevisiae. With this reaction in place, the cytosolic Pi concentration was obtained from intracellular glucose, G1P and maltose concentrations. The cytosolic Pi concentration was determined in batch and chemostat (D = 0.1 h(-1) ) conditions, which was 17.88 µmol/gDW and 25.02 µmol/gDW, respectively under Pi-excess conditions. Under Pi-limited steady state (D = 0.1 h(-1) ) conditions, the cytosolic Pi concentration dropped to only 17.7% of the cytosolic Pi in Pi-excess condition (4.42 µmol/gDW vs. 25.02 µmol/gDW). In response to a Pi pulse, the cytosolic Pi increased very rapidly, together with the concentration of sugar phosphates. Main sources of the rapid Pi increase are vacuolar Pi (and not the polyPi), as well as Pi uptake from the extracellular space. The temporal increase of cytosolic Pi increases the driving force of GAPDH reaction of the lower glycolytic reactions. The novel cytosol specific Pi concentration measurements provide new insight into the thermodynamic driving force for ATP hydrolysis, GAPDH reaction, and Pi transport over the plasma and vacuolar membranes.
© 2014 Wiley Periodicals, Inc.

Entities:  

Keywords:  Compartmentation; Cytosolic Pi; Metabolomics; Quantitative metabolomics; S. cerevisiae; in vivo

Mesh:

Substances:

Year:  2015        PMID: 25502731     DOI: 10.1002/bit.25516

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  8 in total

1.  In Vivo Analysis of NH4+ Transport and Central Nitrogen Metabolism in Saccharomyces cerevisiae during Aerobic Nitrogen-Limited Growth.

Authors:  H F Cueto-Rojas; R Maleki Seifar; A Ten Pierick; W van Helmond; M M Pieterse; J J Heijnen; S A Wahl
Journal:  Appl Environ Microbiol       Date:  2016-09-16       Impact factor: 4.792

2.  Metabolic engineering of a tyrosine-overproducing yeast platform using targeted metabolomics.

Authors:  Nicholas D Gold; Christopher M Gowen; Francois-Xavier Lussier; Sarat C Cautha; Radhakrishnan Mahadevan; Vincent J J Martin
Journal:  Microb Cell Fact       Date:  2015-05-28       Impact factor: 5.328

3.  Intracellular product recycling in high succinic acid producing yeast at low pH.

Authors:  S Aljoscha Wahl; Cristina Bernal Martinez; Zheng Zhao; Walter M van Gulik; Mickel L A Jansen
Journal:  Microb Cell Fact       Date:  2017-05-23       Impact factor: 5.328

4.  Phosphate Assay Kit in One Cell for Electrochemical Detection of Intracellular Phosphate Ions at Single Cells.

Authors:  Haiyan Xu; Dandan Yang; Dechen Jiang; Hong-Yuan Chen
Journal:  Front Chem       Date:  2019-05-24       Impact factor: 5.221

5.  Metabolic switches from quiescence to growth in synchronized Saccharomyces cerevisiae.

Authors:  Jinrui Zhang; Karla Martinez-Gomez; Elmar Heinzle; Sebastian Aljoscha Wahl
Journal:  Metabolomics       Date:  2019-08-29       Impact factor: 4.290

6.  Determination of the Cytosolic NADPH/NADP Ratio in Saccharomyces cerevisiae using Shikimate Dehydrogenase as Sensor Reaction.

Authors:  Jinrui Zhang; Angela ten Pierick; Harmen M van Rossum; Reza Maleki Seifar; Cor Ras; Jean-Marc Daran; Joseph J Heijnen; S Aljoscha Wahl
Journal:  Sci Rep       Date:  2015-08-05       Impact factor: 4.379

7.  VdNUC-2, the Key Regulator of Phosphate Responsive Signaling Pathway, Is Required for Verticillium dahliae Infection.

Authors:  Sheng Deng; Cai-yue Wang; Xin Zhang; Qing Wang; Ling Lin
Journal:  PLoS One       Date:  2015-12-15       Impact factor: 3.240

8.  Alpha-ketoglutarate utilization in Saccharomyces cerevisiae: transport, compartmentation and catabolism.

Authors:  Jinrui Zhang; Bas Mees van den Herik; Sebastian Aljoscha Wahl
Journal:  Sci Rep       Date:  2020-07-30       Impact factor: 4.379

  8 in total

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