Literature DB >> 25501942

Clustal omega.

Fabian Sievers1, Desmond G Higgins.   

Abstract

Clustal Omega is a package for making multiple sequence alignments of amino acid or nucleotide sequences, quickly and accurately. It is a complete upgrade and rewrite of earlier Clustal programs. This unit describes how to run Clustal Omega interactively from a command line, although it can also be run online from several sites. The unit describes a basic protocol for taking a set of unaligned sequences and producing a full alignment. There are also protocols for using an external HMM or iteration to help improve an alignment.
Copyright © 2014 John Wiley & Sons, Inc.

Keywords:  Clustal Omega; HMM; hidden Markov model; iteration; multiple sequence alignment

Mesh：

Year:  2014        PMID： 25501942     DOI： 10.1002/0471250953.bi0313s48

Source DB:  PubMed          Journal:  Curr Protoc Bioinformatics        ISSN： 1934-3396


  101 in total

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