Literature DB >> 25500185

A structured annotation frame for the transposable phages: a new proposed family "Saltoviridae" within the Caudovirales.

Chantal Hulo1, Patrick Masson1, Philippe Le Mercier1, Ariane Toussaint2.   

Abstract

Enterobacteriophage Mu is the best studied and paradigm member of the transposable phages. Mu-encoded proteins have been annotated in detail in UniProtKB and linked to a controlled vocabulary describing the various steps involved in the phage lytic and lysogenic cycles. Transposable phages are ubiquitous temperate bacterial viruses with a dsDNA linear genome. Twenty-six of them, that infect α, β and γ-proteobacteria, have been sequenced. Their conserved properties are described. Based on these characteristics, we propose a reorganization of the Caudovirales, to allow for the inclusion of a "Saltoviridae" family and two newly proposed subfamilies, the "Myosaltovirinae" and "Siphosaltovirinae". The latter could temporarily be included in the existing Myoviridae and Siphoviridae families.
Copyright © 2015. Published by Elsevier Inc.

Entities:  

Keywords:  Caudovirales; Phage protein annotation; Phage taxonomy; “Myosaltovirinae”; “Saltoviridae”; “Siphosaltovirinae”

Mesh:

Substances:

Year:  2014        PMID: 25500185     DOI: 10.1016/j.virol.2014.10.009

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  15 in total

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