Literature DB >> 25497059

Enzyme kinetics determined by single-injection isothermal titration calorimetry.

Mark K Transtrum1, Lee D Hansen2, Colette Quinn3.   

Abstract

The purposes of this paper are (a) to examine the effect of calorimeter time constant (τ) on heat rate data from a single enzyme injection into substrate in an isothermal titration calorimeter (ITC), (b) to provide information that can be used to predict the optimum experimental conditions for determining the rate constant (k2), Michaelis constant (KM), and enthalpy change of the reaction (ΔRH), and (c) to describe methods for evaluating these parameters. We find that KM, k2 and ΔRH can be accurately estimated without correcting for the calorimeter time constant, τ, if (k2E/KM), where E is the total active enzyme concentration, is between 0.1/τ and 1/τ and the reaction goes to at least 99% completion. If experimental conditions are outside this domain and no correction is made for τ, errors in the inferred parameters quickly become unreasonable. A method for fitting single-injection data to the Michaelis-Menten or Briggs-Haldane model to simultaneously evaluate KM, k2, ΔRH, and τ is described and validated with experimental data. All four of these parameters can be accurately inferred provided the reaction time constant (k2E/KM) is larger than 1/τ and the data include enzyme saturated conditions.
Copyright © 2014 Elsevier Inc. All rights reserved.

Keywords:  Briggs–Haldane; Calorimetry; Enthalpy; ITC; Michaelis–Menten; Time constant

Mesh:

Substances:

Year:  2014        PMID: 25497059     DOI: 10.1016/j.ymeth.2014.12.003

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  7 in total

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Authors:  Kirk A Vander Meulen; Scott Horowitz; Raymond C Trievel; Samuel E Butcher
Journal:  Methods Enzymol       Date:  2015-10-09       Impact factor: 1.600

2.  Isothermal titration calorimetry in the single-injection mode with imperfect mixing.

Authors:  Philippe Dumas
Journal:  Eur Biophys J       Date:  2022-01-08       Impact factor: 1.733

Review 3.  The thermodynamics of protein interactions with essential first row transition metals.

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Journal:  Biochim Biophys Acta       Date:  2015-11-10

4.  Isothermal Titration Calorimetry.

Authors:  Christopher M Johnson
Journal:  Methods Mol Biol       Date:  2021

5.  Isothermal Titration Calorimetry Enables Rapid Characterization of Enzyme Kinetics and Inhibition for the Human Soluble Epoxide Hydrolase.

Authors:  Giancarlo Abis; Raúl Pacheco-Gómez; Tam T T Bui; Maria R Conte
Journal:  Anal Chem       Date:  2019-11-12       Impact factor: 6.986

Review 6.  Enzyme Kinetics by Isothermal Titration Calorimetry: Allostery, Inhibition, and Dynamics.

Authors:  Yun Wang; Guanyu Wang; Nicolas Moitessier; Anthony K Mittermaier
Journal:  Front Mol Biosci       Date:  2020-10-19

7.  Thermodynamics and Kinetics of Glycolytic Reactions. Part II: Influence of Cytosolic Conditions on Thermodynamic State Variables and Kinetic Parameters.

Authors:  Kristina Vogel; Thorsten Greinert; Monique Reichard; Christoph Held; Hauke Harms; Thomas Maskow
Journal:  Int J Mol Sci       Date:  2020-10-25       Impact factor: 5.923

  7 in total

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