Literature DB >> 25495923

Next generation sequencing in non-small cell lung cancer: new avenues toward the personalized medicine.

Simona Coco, Anna Truini, Irene Vanni, Maria Giovanna Dal Bello, Angela Alama, Erika Rijavec, Carlo Genova, Giulia Barletta, Claudio Sini, Giovanni Burrafato, Federica Biello, Francesco Boccardo, Francesco Grossi1.   

Abstract

Non-small cell lung cancer (NSCLC) is one of the most common causes of cancer-related death worldwide. Based on the patient's stage of disease, treatment options include surgery, radiotherapy, and chemotherapy. Although chemotherapy remains the main therapeutic approach for advanced NSCLC, targeted therapy represents a good chance of treatment for this subgroup of patients. Currently this approach is based on previous evaluation of clinically relevant mutations and the Sanger sequencing is the main approach to assign mutational status and to guide the appropriate treatment; however this tool is characterized by a low sensitivity. Recently, the advent of next-generation sequencing (NGS) has dramatically revolutionized the molecular knowledge of cancer by increasing the feasibility and possibility to sequence DNA ranging from large scale studies to targeted regions. This review reports an overview of different applications of the NGS as novel approach to study NSCLC, thereby providing information about mutational spectrum of this cancer in order to identify novel targetable mutations and to predict the emergence of drug resistance. All studies demonstrated several advantages of this approach over the traditional tools. In particular the NGS was also able to reveal mutations in low percentage, and to screen the mutational status of different critical samples such as biopsies, cytological samples and circulating plasma DNA, offering innovative diagnostic opportunities. Despite several problems have to be overcome toward the personalized therapy, the NGS represents a highly attractive system to identify mutations improving the outcome of patients with this deadly disease.

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Year:  2015        PMID: 25495923     DOI: 10.2174/1389450116666141210094640

Source DB:  PubMed          Journal:  Curr Drug Targets        ISSN: 1389-4501            Impact factor:   3.465


  19 in total

1.  Clinical impact of targeted amplicon sequencing for meningioma as a practical clinical-sequencing system.

Authors:  Sayaka Yuzawa; Hiroshi Nishihara; Shigeru Yamaguchi; Hiromi Mohri; Lei Wang; Taichi Kimura; Masumi Tsuda; Mishie Tanino; Hiroyuki Kobayashi; Shunsuke Terasaka; Kiyohiro Houkin; Norihiro Sato; Shinya Tanaka
Journal:  Mod Pathol       Date:  2016-04-22       Impact factor: 7.842

2.  European Thyroid Association Guidelines regarding Thyroid Nodule Molecular Fine-Needle Aspiration Cytology Diagnostics.

Authors:  Ralf Paschke; Silvia Cantara; Anna Crescenzi; Barbara Jarzab; Thomas J Musholt; Manuel Sobrinho Simoes
Journal:  Eur Thyroid J       Date:  2017-05-19

3.  Performance comparison of two commercial human whole-exome capture systems on formalin-fixed paraffin-embedded lung adenocarcinoma samples.

Authors:  Silvia Bonfiglio; Irene Vanni; Valeria Rossella; Anna Truini; Dejan Lazarevic; Maria Giovanna Dal Bello; Angela Alama; Marco Mora; Erika Rijavec; Carlo Genova; Davide Cittaro; Francesco Grossi; Simona Coco
Journal:  BMC Cancer       Date:  2016-08-30       Impact factor: 4.430

4.  Whole exome sequencing of independent lung adenocarcinoma, lung squamous cell carcinoma, and malignant peritoneal mesothelioma: A case report.

Authors:  Irene Vanni; Simona Coco; Silvia Bonfiglio; Davide Cittaro; Carlo Genova; Federica Biello; Marco Mora; Valeria Rossella; Maria Giovanna Dal Bello; Anna Truini; Barbara Banelli; Dejan Lazarevic; Angela Alama; Erika Rijavec; Giulia Barletta; Francesco Grossi
Journal:  Medicine (Baltimore)       Date:  2016-11       Impact factor: 1.889

5.  Post-crizotinib management of effective ceritinib therapy in a patient with ALK-positive non-small cell lung cancer.

Authors:  Brian Won; Isa Mambetsariev; Ravi Salgia
Journal:  BMC Cancer       Date:  2016-08-02       Impact factor: 4.430

Review 6.  Molecular Signature of Indeterminate Thyroid Lesions: Current Methods to Improve Fine Needle Aspiration Cytology (FNAC) Diagnosis.

Authors:  Silvia Cantara; Carlotta Marzocchi; Tania Pilli; Sandro Cardinale; Raffaella Forleo; Maria Grazia Castagna; Furio Pacini
Journal:  Int J Mol Sci       Date:  2017-04-06       Impact factor: 5.923

Review 7.  A Next-Generation Sequencing Primer-How Does It Work and What Can It Do?

Authors:  Yuriy O Alekseyev; Roghayeh Fazeli; Shi Yang; Raveen Basran; Thomas Maher; Nancy S Miller; Daniel Remick
Journal:  Acad Pathol       Date:  2018-05-06

8.  Clinical potential of gene mutations in lung cancer.

Authors:  Miranda B Carper; Pier Paolo Claudio
Journal:  Clin Transl Med       Date:  2015-11-24

9.  Next-Generation Sequencing Workflow for NSCLC Critical Samples Using a Targeted Sequencing Approach by Ion Torrent PGM™ Platform.

Authors:  Irene Vanni; Simona Coco; Anna Truini; Marta Rusmini; Maria Giovanna Dal Bello; Angela Alama; Barbara Banelli; Marco Mora; Erika Rijavec; Giulia Barletta; Carlo Genova; Federica Biello; Claudia Maggioni; Francesco Grossi
Journal:  Int J Mol Sci       Date:  2015-12-03       Impact factor: 5.923

Review 10.  Building the Evidence Base of Blood-Based Biomarkers for Early Detection of Cancer: A Rapid Systematic Mapping Review.

Authors:  Lesley Uttley; Becky L Whiteman; Helen Buckley Woods; Susan Harnan; Sian Taylor Philips; Ian A Cree
Journal:  EBioMedicine       Date:  2016-07-06       Impact factor: 8.143

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