Literature DB >> 25494442

Imaging and sizing of single DNA molecules on a mobile phone.

Qingshan Wei1, Wei Luo, Samuel Chiang, Tara Kappel, Crystal Mejia, Derek Tseng, Raymond Yan Lok Chan, Eddie Yan, Hangfei Qi, Faizan Shabbir, Haydar Ozkan, Steve Feng, Aydogan Ozcan.   

Abstract

DNA imaging techniques using optical microscopy have found numerous applications in biology, chemistry and physics and are based on relatively expensive, bulky and complicated set-ups that limit their use to advanced laboratory settings. Here we demonstrate imaging and length quantification of single molecule DNA strands using a compact, lightweight and cost-effective fluorescence microscope installed on a mobile phone. In addition to an optomechanical attachment that creates a high contrast dark-field imaging setup using an external lens, thin-film interference filters, a miniature dovetail stage and a laser-diode for oblique-angle excitation, we also created a computational framework and a mobile phone application connected to a server back-end for measurement of the lengths of individual DNA molecules that are labeled and stretched using disposable chips. Using this mobile phone platform, we imaged single DNA molecules of various lengths to demonstrate a sizing accuracy of <1 kilobase-pairs (kbp) for 10 kbp and longer DNA samples imaged over a field-of-view of ∼2 mm2.

Keywords:  DNA imaging; DNA sizing; cell phone microscopy; fluorescence imaging; mobile health; point-of-care

Mesh:

Substances:

Year:  2014        PMID: 25494442     DOI: 10.1021/nn505821y

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  38 in total

1.  Applications of smartphone-based near-infrared (NIR) imaging, measurement, and spectroscopy technologies to point-of-care (POC) diagnostics.

Authors:  Wenjing Huang; Shenglin Luo; Dong Yang; Sheng Zhang
Journal:  J Zhejiang Univ Sci B       Date:  2021-03-15       Impact factor: 3.066

2.  Inkjet-printed point-of-care immunoassay on a nanoscale polymer brush enables subpicomolar detection of analytes in blood.

Authors:  Daniel Y Joh; Angus M Hucknall; Qingshan Wei; Kelly A Mason; Margaret L Lund; Cassio M Fontes; Ryan T Hill; Rebecca Blair; Zackary Zimmers; Rohan K Achar; Derek Tseng; Raluca Gordan; Michael Freemark; Aydogan Ozcan; Ashutosh Chilkoti
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-07       Impact factor: 11.205

Review 3.  Microfluidics for sperm analysis and selection.

Authors:  Reza Nosrati; Percival J Graham; Biao Zhang; Jason Riordon; Alexander Lagunov; Thomas G Hannam; Carlos Escobedo; Keith Jarvi; David Sinton
Journal:  Nat Rev Urol       Date:  2017-10-31       Impact factor: 14.432

4.  Expansion Mini-Microscopy: An Enabling Alternative in Point-of-Care Diagnostics.

Authors:  Yu Shrike Zhang; Grissel Trujillo-de Santiago; Mario Moisés Alvarez; Steven J Schiff; Edward S Boyden; Ali Khademhosseini
Journal:  Curr Opin Biomed Eng       Date:  2017-03-22

5.  Automated 3-D Printed Arrays to Evaluate Genotoxic Chemistry: E-Cigarettes and Water Samples.

Authors:  Karteek Kadimisetty; Spundana Malla; James F Rusling
Journal:  ACS Sens       Date:  2017-05-02       Impact factor: 7.711

6.  A cost-effective fluorescence mini-microscope for biomedical applications.

Authors:  Yu Shrike Zhang; João Ribas; Akhtar Nadhman; Julio Aleman; Šeila Selimović; Sasha Cai Lesher-Perez; Ting Wang; Vijayan Manoharan; Su-Ryon Shin; Alessia Damilano; Nasim Annabi; Mehmet Remzi Dokmeci; Shuichi Takayama; Ali Khademhosseini
Journal:  Lab Chip       Date:  2015       Impact factor: 6.799

7.  3D-printed supercapacitor-powered electrochemiluminescent protein immunoarray.

Authors:  Karteek Kadimisetty; Islam M Mosa; Spundana Malla; Jennifer E Satterwhite-Warden; Tyler M Kuhns; Ronaldo C Faria; Norman H Lee; James F Rusling
Journal:  Biosens Bioelectron       Date:  2015-09-11       Impact factor: 10.618

8.  Automated 3D-Printed Microfluidic Array for Rapid Nanomaterial-Enhanced Detection of Multiple Proteins.

Authors:  Karteek Kadimisetty; Spundana Malla; Ketki S Bhalerao; Islam M Mosa; Snehasis Bhakta; Norman H Lee; James F Rusling
Journal:  Anal Chem       Date:  2018-05-31       Impact factor: 6.986

Review 9.  3D-printed bioanalytical devices.

Authors:  Gregory W Bishop; Jennifer E Satterwhite-Warden; Karteek Kadimisetty; James F Rusling
Journal:  Nanotechnology       Date:  2016-06-02       Impact factor: 3.874

Review 10.  Point-of-Care Diagnostics: Recent Developments in a Connected Age.

Authors:  Samiksha Nayak; Nicole R Blumenfeld; Tassaneewan Laksanasopin; Samuel K Sia
Journal:  Anal Chem       Date:  2016-12-13       Impact factor: 6.986

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