Literature DB >> 25487327

Parallel detection of ancient pathogens via array-based DNA capture.

Kirsten I Bos1, Günter Jäger2, Verena J Schuenemann3, Åshild J Vågene3, Maria A Spyrou3, Alexander Herbig4, Kay Nieselt2, Johannes Krause5.   

Abstract

DNA capture coupled with next generation sequencing is highly suitable for the study of ancient pathogens. Screening for pathogens can, however, be meticulous when assays are restricted to the enrichment of single organisms, which is common practice. Here, we report on an array-based DNA capture screening technique for the parallel detection of nearly 100 pathogens that could have potentially left behind molecular signatures in preserved ancient tissues. We demonstrate the sensitivity of our method through evaluation of its performance with a library known to harbour ancient Mycobacterium leprae DNA. This rapid and economical technique will be highly useful for the identification of historical diseases that are difficult to characterize based on archaeological information alone.
© 2014 The Author(s) Published by the Royal Society. All rights reserved.

Entities:  

Keywords:  ancient DNA; array capture; palaeopathology; pathogen screening

Mesh:

Substances:

Year:  2015        PMID: 25487327      PMCID: PMC4275883          DOI: 10.1098/rstb.2013.0375

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


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