Literature DB >> 25484833

Crystal structure of S,N-dibenzyl-d-penicillamine monohydrate.

Nobuto Yoshinari1, Takumi Konno2.   

Abstract

In the asymmetric unit of the title compound, C19H23NO2S·H2O, there are two independent organic mol-ecules and two water mol-ecules. Both organic mol-ecules exist as the zwitterionic form. The dihedral angles between the planes of the rings in the organic mol-ecules are 86.84 (10) and 88.77 (11)°. An intramolecular N-H⋯S hydrogen bond occurs. In the crystal, organic and water mol-ecules are linked by N-H⋯O and O-H⋯O hydrogen bonds, generating a tape structure running along the b-axis direction.

Entities:  

Keywords:  crystal structure; hydrogen bonds; penicillamine

Year:  2014        PMID: 25484833      PMCID: PMC4257258          DOI: 10.1107/S1600536814023459

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the title compound, see: Crooks (1949 ▶). For the coordination behavior of d-penicillamine and its derivatives, see: Igashira-Kamiyama & Konno (2011 ▶); Oji et al. (2014 ▶).

Experimental

Crystal data

C19H23NO2S·H2O M = 347.46 Monoclinic, a = 19.930 (2) Å b = 6.2500 (7) Å c = 30.645 (4) Å β = 98.715 (7)° V = 3773.2 (8) Å3 Z = 8 Mo Kα radiation μ = 0.19 mm−1 T = 200 K 0.15 × 0.10 × 0.03 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.778, T max = 0.994 15147 measured reflections 7694 independent reflections 7006 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.093 S = 1.06 7694 reflections 461 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.44 e Å−3 Δρmin = −0.25 e Å−3 Absolute structure: Flack x determined using 2566 quotients [(I +)−(I −)]/[(I +)+(I −)] (Parsons et al., 2013 ▶) Absolute structure parameter: 0.03 (2)

Data collection: PROCESS-AUTO (Rigaku, 2000 ▶); cell refinement: PROCESS-AUTO (Rigaku, 2000 ▶); data reduction: PROCESS-AUTO (Rigaku, 2000 ▶); program(s) used to solve structure: SHELXS2013 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008 ▶); molecular graphics: Yadokari-XG (Kabuto et al., 2009 ▶); software used to prepare material for publication: Yadokari-XG (Kabuto et al., 2009 ▶). Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536814023459/is5378sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814023459/is5378Isup2.hkl Click here for additional data file. . DOI: 10.1107/S1600536814023459/is5378fig1.tif The asymmetric unit of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. Click here for additional data file. b x y z x y z . DOI: 10.1107/S1600536814023459/is5378fig2.tif A view of the tape structure running along the b axis in (I). Blue dashed lines indicate hydrogen bonds. [Symmetry codes: (i) x, y + 1, z; (ii) x, y–1, z.] CCDC reference: 1030824 Additional supporting information: crystallographic information; 3D view; checkCIF report
C19H23NO2S·H2OF(000) = 1488
Mr = 347.46Dx = 1.223 Mg m3
Monoclinic, C2Mo Kα radiation, λ = 0.71075 Å
a = 19.930 (2) ÅCell parameters from 786 reflections
b = 6.2500 (7) Åθ = 3.4–27.5°
c = 30.645 (4) ŵ = 0.19 mm1
β = 98.715 (7)°T = 200 K
V = 3773.2 (8) Å3Platelet, colorless
Z = 80.15 × 0.10 × 0.03 mm
Rigaku R-AXIS RAPID diffractometer7694 independent reflections
Radiation source: fine-focus sealed tube7006 reflections with I > 2σ(I)
Detector resolution: 10.00 pixels mm-1Rint = 0.027
ω scansθmax = 27.5°, θmin = 3.1°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −25→25
Tmin = 0.778, Tmax = 0.994k = −8→8
15147 measured reflectionsl = −39→39
Refinement on F2Hydrogen site location: mixed
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.041w = 1/[σ2(Fo2) + (0.0482P)2 + 1.222P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.093(Δ/σ)max < 0.001
S = 1.06Δρmax = 0.44 e Å3
7694 reflectionsΔρmin = −0.25 e Å3
461 parametersAbsolute structure: Flack x determined using 2566 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
1 restraintAbsolute structure parameter: 0.03 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
S10.54021 (3)0.37960 (9)0.07484 (2)0.02754 (16)
O10.53088 (10)−0.0974 (3)0.19789 (6)0.0392 (5)
O20.60252 (10)−0.2717 (3)0.16081 (6)0.0349 (5)
N10.58790 (11)0.2829 (3)0.17415 (7)0.0240 (4)
H10.5905 (13)0.407 (5)0.1604 (9)0.029*
H20.5508 (14)0.309 (5)0.1889 (9)0.029*
C10.52331 (12)0.1335 (4)0.10419 (8)0.0244 (5)
C20.58099 (12)0.0945 (4)0.14360 (8)0.0234 (5)
H30.62450.07920.13140.028*
C30.57073 (12)−0.1113 (4)0.16993 (8)0.0260 (5)
C40.51755 (14)−0.0596 (4)0.07331 (9)0.0347 (6)
H40.5008−0.18310.08820.052*
H50.5623−0.09300.06550.052*
H60.4859−0.02680.04640.052*
C50.45430 (13)0.1776 (5)0.11894 (10)0.0356 (6)
H70.44350.06160.13820.053*
H80.41910.18580.09300.053*
H90.45630.31350.13500.053*
C60.6145 (2)0.3154 (6)0.04975 (14)0.0591 (10)
H100.64890.24350.07160.071*
H110.60190.21720.02450.071*
C70.64320 (14)0.5184 (5)0.03420 (10)0.0335 (6)
C80.62917 (15)0.5776 (6)−0.00969 (10)0.0458 (8)
H120.60050.4913−0.03020.055*
C90.65753 (18)0.7659 (6)−0.02381 (12)0.0578 (10)
H130.64770.8079−0.05390.069*
C100.69916 (16)0.8889 (6)0.00542 (15)0.0574 (10)
H140.71891.0148−0.00450.069*
C110.71268 (18)0.8333 (6)0.04855 (15)0.0601 (10)
H150.74140.92050.06880.072*
C120.68468 (17)0.6499 (6)0.06289 (11)0.0501 (8)
H160.69410.61270.09330.060*
C130.64745 (13)0.2701 (4)0.21067 (8)0.0318 (6)
H170.64870.40140.22890.038*
H180.64100.14680.22990.038*
C140.71428 (14)0.2462 (5)0.19426 (9)0.0308 (6)
C150.74302 (14)0.4186 (5)0.17595 (9)0.0387 (6)
H190.72000.55200.17300.046*
C160.80556 (15)0.3974 (6)0.16177 (12)0.0529 (9)
H200.82470.51540.14840.063*
C170.84014 (16)0.2054 (7)0.16701 (12)0.0557 (9)
H210.88350.19280.15800.067*
C180.81217 (16)0.0333 (6)0.18518 (12)0.0545 (9)
H220.8359−0.09900.18840.065*
C190.74940 (15)0.0521 (5)0.19883 (10)0.0425 (7)
H230.7300−0.06770.21140.051*
S20.46646 (3)0.93252 (9)0.42752 (2)0.03026 (17)
O30.50246 (10)0.4534 (3)0.30958 (6)0.0380 (5)
O40.42108 (11)0.2829 (3)0.33859 (7)0.0391 (5)
N20.43753 (12)0.8345 (3)0.32686 (7)0.0254 (5)
H240.4737 (15)0.852 (5)0.3142 (9)0.030*
H250.4328 (14)0.955 (5)0.3400 (9)0.030*
C200.49179 (13)0.6890 (4)0.40019 (8)0.0276 (6)
C210.44067 (13)0.6488 (4)0.35761 (8)0.0249 (5)
H260.39470.63250.36650.030*
C220.45587 (13)0.4405 (4)0.33312 (8)0.0275 (5)
C230.49265 (17)0.4945 (5)0.43061 (9)0.0402 (7)
H270.51270.37220.41730.060*
H280.44610.45940.43480.060*
H290.51970.52730.45930.060*
C240.56361 (14)0.7409 (5)0.39158 (10)0.0398 (7)
H300.59300.76680.41970.060*
H310.56250.86900.37300.060*
H320.58140.62010.37640.060*
C250.3886 (2)0.8563 (6)0.44760 (15)0.0630 (11)
H330.35960.76980.42510.076*
H340.39910.77030.47490.076*
C260.35257 (14)1.0599 (5)0.45678 (10)0.0365 (7)
C270.3042 (2)1.1515 (10)0.42613 (13)0.0805 (15)
H350.29311.08790.39780.097*
C280.2713 (3)1.3345 (13)0.4359 (3)0.124 (3)
H360.23701.39440.41450.149*
C290.2872 (3)1.4297 (8)0.4754 (3)0.110 (3)
H370.26461.55750.48170.133*
C300.3356 (2)1.3424 (7)0.50638 (17)0.0781 (15)
H380.34681.40920.53440.094*
C310.36859 (16)1.1567 (6)0.49720 (10)0.0447 (8)
H390.40231.09610.51890.054*
C320.38062 (14)0.8229 (5)0.28808 (9)0.0334 (6)
H400.38830.93330.26620.040*
H410.38190.68130.27370.040*
C330.31154 (14)0.8556 (5)0.30101 (9)0.0339 (6)
C340.28147 (16)1.0576 (6)0.29587 (10)0.0444 (8)
H420.30561.17410.28570.053*
C350.21634 (18)1.0884 (7)0.30561 (12)0.0605 (11)
H430.19581.22570.30210.073*
C360.18146 (16)0.9183 (8)0.32053 (11)0.0605 (11)
H440.13690.93940.32710.073*
C370.21099 (17)0.7187 (7)0.32586 (11)0.0544 (9)
H450.18690.60310.33630.065*
C380.27558 (15)0.6868 (6)0.31597 (10)0.0413 (7)
H460.29560.54870.31940.050*
O50.49439 (11)0.4819 (3)0.21838 (8)0.0391 (5)
H470.4939 (16)0.483 (6)0.2448 (11)0.047*
H480.5069 (17)0.601 (6)0.2145 (11)0.047*
O60.54027 (12)0.0182 (4)0.28774 (8)0.0425 (5)
H490.5289 (18)0.141 (6)0.2907 (11)0.051*
H500.5348 (17)0.001 (6)0.2613 (12)0.051*
U11U22U33U12U13U23
S10.0323 (3)0.0171 (3)0.0342 (3)0.0018 (2)0.0084 (3)0.0037 (3)
O10.0554 (12)0.0240 (10)0.0426 (11)−0.0015 (9)0.0219 (10)0.0062 (9)
O20.0442 (11)0.0158 (9)0.0455 (11)0.0028 (8)0.0091 (9)0.0017 (8)
N10.0281 (11)0.0137 (10)0.0321 (12)−0.0022 (8)0.0101 (10)−0.0005 (8)
C10.0250 (12)0.0157 (12)0.0327 (13)−0.0031 (9)0.0048 (11)0.0039 (10)
C20.0238 (12)0.0150 (11)0.0327 (13)−0.0013 (9)0.0082 (11)−0.0002 (10)
C30.0311 (12)0.0175 (12)0.0284 (12)−0.0029 (10)0.0010 (11)−0.0017 (10)
C40.0395 (14)0.0210 (13)0.0411 (15)−0.0051 (12)−0.0018 (12)−0.0023 (12)
C50.0238 (13)0.0365 (16)0.0477 (16)−0.0011 (11)0.0088 (12)0.0100 (13)
C60.071 (2)0.0302 (17)0.089 (3)0.0130 (16)0.053 (2)0.0130 (17)
C70.0304 (14)0.0277 (14)0.0463 (16)0.0041 (11)0.0179 (13)0.0057 (12)
C80.0330 (15)0.056 (2)0.0477 (18)−0.0005 (14)0.0025 (14)0.0030 (16)
C90.050 (2)0.069 (3)0.057 (2)0.0199 (19)0.0183 (18)0.033 (2)
C100.0424 (17)0.0333 (18)0.106 (3)0.0004 (15)0.040 (2)0.008 (2)
C110.0464 (19)0.052 (2)0.086 (3)−0.0097 (16)0.022 (2)−0.025 (2)
C120.0473 (19)0.062 (2)0.0436 (17)0.0082 (17)0.0142 (15)−0.0038 (16)
C130.0409 (15)0.0250 (14)0.0288 (13)−0.0049 (12)0.0036 (12)−0.0022 (11)
C140.0304 (14)0.0285 (15)0.0307 (13)−0.0023 (11)−0.0043 (11)−0.0033 (11)
C150.0338 (13)0.0333 (16)0.0486 (16)0.0028 (13)0.0049 (12)0.0040 (14)
C160.0364 (15)0.057 (2)0.067 (2)−0.0038 (16)0.0131 (15)0.0060 (19)
C170.0285 (15)0.069 (3)0.069 (2)0.0056 (16)0.0063 (16)−0.006 (2)
C180.0399 (17)0.045 (2)0.075 (2)0.0126 (15)−0.0035 (17)−0.0053 (18)
C190.0408 (16)0.0302 (16)0.0532 (18)−0.0008 (13)−0.0035 (14)−0.0016 (13)
S20.0398 (4)0.0192 (4)0.0337 (3)−0.0036 (3)0.0115 (3)−0.0060 (3)
O30.0476 (11)0.0289 (11)0.0412 (10)0.0018 (9)0.0189 (9)−0.0071 (9)
O40.0501 (12)0.0178 (10)0.0506 (12)−0.0071 (9)0.0119 (10)−0.0058 (9)
N20.0319 (11)0.0157 (10)0.0300 (12)−0.0018 (9)0.0093 (10)−0.0017 (9)
C200.0355 (14)0.0175 (12)0.0303 (13)0.0024 (10)0.0061 (12)−0.0050 (10)
C210.0302 (13)0.0159 (12)0.0305 (13)−0.0019 (10)0.0108 (11)−0.0024 (10)
C220.0346 (13)0.0183 (12)0.0291 (12)0.0014 (11)0.0031 (11)−0.0005 (11)
C230.0590 (19)0.0256 (15)0.0337 (15)0.0034 (13)−0.0004 (14)0.0007 (12)
C240.0330 (15)0.0426 (18)0.0437 (16)−0.0013 (13)0.0052 (13)−0.0122 (14)
C250.071 (2)0.039 (2)0.091 (3)−0.0139 (17)0.054 (2)−0.0174 (19)
C260.0333 (15)0.0376 (17)0.0424 (16)−0.0056 (13)0.0177 (13)−0.0084 (13)
C270.050 (2)0.143 (5)0.047 (2)−0.001 (3)0.0041 (19)0.017 (3)
C280.061 (3)0.149 (7)0.169 (6)0.050 (4)0.038 (4)0.107 (5)
C290.070 (3)0.042 (3)0.243 (8)0.014 (2)0.096 (5)0.020 (4)
C300.072 (3)0.065 (3)0.111 (3)−0.033 (2)0.057 (3)−0.052 (3)
C310.0386 (16)0.052 (2)0.0454 (17)−0.0048 (14)0.0122 (14)−0.0092 (15)
C320.0427 (15)0.0287 (14)0.0281 (13)0.0011 (12)0.0029 (12)−0.0006 (11)
C330.0357 (14)0.0324 (15)0.0311 (14)−0.0018 (12)−0.0032 (12)−0.0081 (11)
C340.0443 (17)0.0398 (19)0.0446 (17)0.0038 (14)−0.0076 (14)−0.0110 (14)
C350.049 (2)0.060 (2)0.065 (2)0.0200 (18)−0.0163 (18)−0.026 (2)
C360.0316 (15)0.093 (3)0.055 (2)0.006 (2)−0.0012 (15)−0.033 (2)
C370.0389 (18)0.074 (3)0.0501 (19)−0.0087 (18)0.0062 (16)−0.0110 (19)
C380.0381 (16)0.0424 (17)0.0420 (16)−0.0028 (13)0.0021 (14)−0.0072 (14)
O50.0536 (13)0.0256 (11)0.0425 (11)0.0005 (9)0.0214 (10)0.0005 (9)
O60.0581 (14)0.0281 (11)0.0461 (12)−0.0041 (10)0.0236 (11)−0.0020 (10)
S1—C61.814 (3)O3—C221.262 (3)
S1—C11.839 (2)O4—C221.230 (3)
O1—C31.256 (3)N2—C211.490 (3)
O2—C31.240 (3)N2—C321.515 (4)
N1—C21.497 (3)N2—H240.88 (3)
N1—C131.505 (3)N2—H250.87 (3)
N1—H10.89 (3)C20—C241.529 (4)
N1—H20.94 (3)C20—C231.531 (4)
C1—C41.527 (4)C20—C211.549 (4)
C1—C51.536 (3)C21—C221.556 (3)
C1—C21.555 (3)C21—H261.0000
C2—C31.549 (3)C23—H270.9800
C2—H31.0000C23—H280.9800
C4—H40.9800C23—H290.9800
C4—H50.9800C24—H300.9800
C4—H60.9800C24—H310.9800
C5—H70.9800C24—H320.9800
C5—H80.9800C25—C261.508 (5)
C5—H90.9800C25—H330.9900
C6—C71.498 (4)C25—H340.9900
C6—H100.9900C26—C271.366 (5)
C6—H110.9900C26—C311.372 (4)
C7—C81.382 (4)C27—C281.373 (9)
C7—C121.383 (5)C27—H350.9500
C8—C91.402 (5)C28—C291.343 (9)
C8—H120.9500C28—H360.9500
C9—C101.363 (5)C29—C301.362 (8)
C9—H130.9500C29—H370.9500
C10—C111.354 (6)C30—C311.384 (6)
C10—H140.9500C30—H380.9500
C11—C121.376 (5)C31—H390.9500
C11—H150.9500C32—C331.503 (4)
C12—H160.9500C32—H400.9900
C13—C141.501 (4)C32—H410.9900
C13—H170.9900C33—C381.392 (4)
C13—H180.9900C33—C341.396 (4)
C14—C151.379 (4)C34—C351.389 (5)
C14—C191.397 (4)C34—H420.9500
C15—C161.387 (4)C35—C361.385 (6)
C15—H190.9500C35—H430.9500
C16—C171.381 (5)C36—C371.378 (6)
C16—H200.9500C36—H440.9500
C17—C181.368 (5)C37—C381.381 (4)
C17—H210.9500C37—H450.9500
C18—C191.383 (4)C38—H460.9500
C18—H220.9500O5—H470.81 (3)
C19—H230.9500O5—H480.80 (4)
S2—C251.817 (3)O6—H490.81 (4)
S2—C201.844 (3)O6—H500.81 (3)
C6—S1—C1104.14 (14)C21—N2—C32114.4 (2)
C2—N1—C13114.3 (2)C21—N2—H24114.7 (19)
C2—N1—H1113.4 (18)C32—N2—H24103.1 (18)
C13—N1—H1107.6 (18)C21—N2—H25112.5 (19)
C2—N1—H2115.6 (18)C32—N2—H25106.5 (19)
C13—N1—H2104.0 (17)H24—N2—H25105 (3)
H1—N1—H2101 (2)C24—C20—C23110.4 (2)
C4—C1—C5109.7 (2)C24—C20—C21113.7 (2)
C4—C1—C2109.6 (2)C23—C20—C21109.2 (2)
C5—C1—C2112.9 (2)C24—C20—S2103.38 (18)
C4—C1—S1111.12 (17)C23—C20—S2110.94 (17)
C5—C1—S1103.44 (17)C21—C20—S2109.02 (17)
C2—C1—S1110.01 (16)N2—C21—C20111.4 (2)
N1—C2—C3109.52 (19)N2—C21—C22109.84 (18)
N1—C2—C1110.5 (2)C20—C21—C22113.0 (2)
C3—C2—C1113.22 (19)N2—C21—H26107.4
N1—C2—H3107.8C20—C21—H26107.4
C3—C2—H3107.8C22—C21—H26107.4
C1—C2—H3107.8O4—C22—O3127.4 (2)
O2—C3—O1127.4 (2)O4—C22—C21116.7 (2)
O2—C3—C2116.2 (2)O3—C22—C21115.9 (2)
O1—C3—C2116.4 (2)C20—C23—H27109.5
C1—C4—H4109.5C20—C23—H28109.5
C1—C4—H5109.5H27—C23—H28109.5
H4—C4—H5109.5C20—C23—H29109.5
C1—C4—H6109.5H27—C23—H29109.5
H4—C4—H6109.5H28—C23—H29109.5
H5—C4—H6109.5C20—C24—H30109.5
C1—C5—H7109.5C20—C24—H31109.5
C1—C5—H8109.5H30—C24—H31109.5
H7—C5—H8109.5C20—C24—H32109.5
C1—C5—H9109.5H30—C24—H32109.5
H7—C5—H9109.5H31—C24—H32109.5
H8—C5—H9109.5C26—C25—S2107.3 (2)
C7—C6—S1108.8 (2)C26—C25—H33110.3
C7—C6—H10109.9S2—C25—H33110.3
S1—C6—H10109.9C26—C25—H34110.3
C7—C6—H11109.9S2—C25—H34110.3
S1—C6—H11109.9H33—C25—H34108.5
H10—C6—H11108.3C27—C26—C31118.7 (4)
C8—C7—C12118.2 (3)C27—C26—C25122.1 (4)
C8—C7—C6120.4 (3)C31—C26—C25119.2 (3)
C12—C7—C6121.4 (3)C26—C27—C28120.6 (5)
C7—C8—C9119.6 (3)C26—C27—H35119.7
C7—C8—H12120.2C28—C27—H35119.7
C9—C8—H12120.2C29—C28—C27120.8 (5)
C10—C9—C8120.3 (3)C29—C28—H36119.6
C10—C9—H13119.9C27—C28—H36119.6
C8—C9—H13119.9C28—C29—C30119.7 (5)
C11—C10—C9120.5 (3)C28—C29—H37120.2
C11—C10—H14119.7C30—C29—H37120.2
C9—C10—H14119.7C29—C30—C31120.2 (4)
C10—C11—C12119.7 (4)C29—C30—H38119.9
C10—C11—H15120.1C31—C30—H38119.9
C12—C11—H15120.1C26—C31—C30120.1 (4)
C11—C12—C7121.6 (3)C26—C31—H39120.0
C11—C12—H16119.2C30—C31—H39120.0
C7—C12—H16119.2C33—C32—N2113.2 (2)
C14—C13—N1113.3 (2)C33—C32—H40108.9
C14—C13—H17108.9N2—C32—H40108.9
N1—C13—H17108.9C33—C32—H41108.9
C14—C13—H18108.9N2—C32—H41108.9
N1—C13—H18108.9H40—C32—H41107.8
H17—C13—H18107.7C38—C33—C34119.3 (3)
C15—C14—C19119.1 (3)C38—C33—C32121.4 (3)
C15—C14—C13120.2 (3)C34—C33—C32119.2 (3)
C19—C14—C13120.6 (3)C35—C34—C33120.0 (3)
C14—C15—C16120.1 (3)C35—C34—H42120.0
C14—C15—H19119.9C33—C34—H42120.0
C16—C15—H19119.9C36—C35—C34119.8 (3)
C17—C16—C15120.2 (3)C36—C35—H43120.1
C17—C16—H20119.9C34—C35—H43120.1
C15—C16—H20119.9C37—C36—C35120.5 (3)
C18—C17—C16120.3 (3)C37—C36—H44119.8
C18—C17—H21119.9C35—C36—H44119.8
C16—C17—H21119.9C36—C37—C38120.0 (4)
C17—C18—C19119.9 (3)C36—C37—H45120.0
C17—C18—H22120.0C38—C37—H45120.0
C19—C18—H22120.0C37—C38—C33120.4 (3)
C18—C19—C14120.4 (3)C37—C38—H46119.8
C18—C19—H23119.8C33—C38—H46119.8
C14—C19—H23119.8H47—O5—H48101 (4)
C25—S2—C20104.13 (14)H49—O6—H50104 (4)
C6—S1—C1—C4−53.7 (2)C25—S2—C20—C24−169.3 (2)
C6—S1—C1—C5−171.4 (2)C25—S2—C20—C23−51.0 (3)
C6—S1—C1—C267.8 (2)C25—S2—C20—C2169.4 (2)
C13—N1—C2—C360.9 (3)C32—N2—C21—C20−170.4 (2)
C13—N1—C2—C1−173.69 (19)C32—N2—C21—C2263.5 (3)
C4—C1—C2—N1179.6 (2)C24—C20—C21—N2−56.5 (3)
C5—C1—C2—N1−57.9 (3)C23—C20—C21—N2179.7 (2)
S1—C1—C2—N157.1 (2)S2—C20—C21—N258.3 (2)
C4—C1—C2—C3−57.2 (3)C24—C20—C21—C2267.8 (3)
C5—C1—C2—C365.4 (3)C23—C20—C21—C22−56.1 (3)
S1—C1—C2—C3−179.64 (16)S2—C20—C21—C22−177.47 (17)
N1—C2—C3—O2−137.9 (2)N2—C21—C22—O4−134.3 (2)
C1—C2—C3—O298.4 (3)C20—C21—C22—O4100.6 (3)
N1—C2—C3—O142.6 (3)N2—C21—C22—O345.3 (3)
C1—C2—C3—O1−81.2 (3)C20—C21—C22—O3−79.8 (3)
C1—S1—C6—C7−166.4 (3)C20—S2—C25—C26−161.7 (2)
S1—C6—C7—C8−99.3 (3)S2—C25—C26—C2793.5 (4)
S1—C6—C7—C1281.4 (4)S2—C25—C26—C31−86.6 (3)
C12—C7—C8—C90.6 (4)C31—C26—C27—C28−1.2 (6)
C6—C7—C8—C9−178.7 (3)C25—C26—C27—C28178.6 (4)
C7—C8—C9—C100.6 (5)C26—C27—C28—C291.5 (8)
C8—C9—C10—C11−1.2 (5)C27—C28—C29—C30−0.9 (9)
C9—C10—C11—C120.6 (5)C28—C29—C30—C310.2 (7)
C10—C11—C12—C70.6 (5)C27—C26—C31—C300.4 (5)
C8—C7—C12—C11−1.2 (5)C25—C26—C31—C30−179.4 (3)
C6—C7—C12—C11178.1 (3)C29—C30—C31—C260.1 (5)
C2—N1—C13—C1457.6 (3)C21—N2—C32—C3371.1 (3)
N1—C13—C14—C1574.4 (3)N2—C32—C33—C38−85.2 (3)
N1—C13—C14—C19−108.1 (3)N2—C32—C33—C3497.9 (3)
C19—C14—C15—C160.9 (4)C38—C33—C34—C35−0.1 (4)
C13—C14—C15—C16178.5 (3)C32—C33—C34—C35176.9 (3)
C14—C15—C16—C17−1.7 (5)C33—C34—C35—C360.2 (5)
C15—C16—C17—C181.7 (5)C34—C35—C36—C370.1 (5)
C16—C17—C18—C19−0.7 (5)C35—C36—C37—C38−0.5 (5)
C17—C18—C19—C14−0.1 (5)C36—C37—C38—C330.6 (5)
C15—C14—C19—C180.0 (4)C34—C33—C38—C37−0.3 (4)
C13—C14—C19—C18−177.5 (3)C32—C33—C38—C37−177.2 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1···S10.89 (3)2.67 (3)3.107 (2)112 (2)
N1—H1···O2i0.89 (3)2.02 (3)2.835 (3)152 (2)
N1—H2···O50.94 (3)1.89 (3)2.761 (3)154 (3)
N2—H24···O6i0.88 (3)1.96 (3)2.774 (3)155 (3)
N2—H25···S20.87 (3)2.67 (3)3.112 (2)113 (2)
N2—H25···O4i0.87 (3)2.06 (3)2.851 (3)151 (3)
O5—H47···O30.81 (3)1.97 (3)2.781 (3)172 (4)
O5—H48···O1i0.80 (4)2.03 (4)2.824 (3)173 (3)
O6—H49···O30.81 (4)2.13 (4)2.927 (3)171 (3)
O6—H50···O10.81 (3)2.03 (4)2.825 (3)169 (4)
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
N1H1S10.89(3)2.67(3)3.107(2)112(2)
N1H1O2i 0.89(3)2.02(3)2.835(3)152(2)
N1H2O50.94(3)1.89(3)2.761(3)154(3)
N2H24O6i 0.88(3)1.96(3)2.774(3)155(3)
N2H25S20.87(3)2.67(3)3.112(2)113(2)
N2H25O4i 0.87(3)2.06(3)2.851(3)151(3)
O5H47O30.81(3)1.97(3)2.781(3)172(4)
O5H48O1i 0.80(4)2.03(4)2.824(3)173(3)
O6H49O30.81(4)2.13(4)2.927(3)171(3)
O6H50O10.81(3)2.03(4)2.825(3)169(4)

Symmetry code: (i) .

  3 in total

Review 1.  Rational creation of chiral multinuclear and metallosupramolecular compounds from thiol-containing amino acids.

Authors:  Asako Igashira-Kamiyama; Takumi Konno
Journal:  Dalton Trans       Date:  2011-04-18       Impact factor: 4.390

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Use of intensity quotients and differences in absolute structure refinement.

Authors:  Simon Parsons; Howard D Flack; Trixie Wagner
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2013-05-17
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.