Literature DB >> 25484748

Crystal structure of dimethyl 3,3'-[(3-nitro-phen-yl)methyl-ene]bis-(1H-indole-2-carboxyl-ate) ethanol monosolvate.

Hong-Shun Sun1, Yu-Long Li1, Hong Jiang1, Ning Xu1, Hong Xu1.   

Abstract

In the title compound, C27H21N3O6·C2H5OH, the indole ring systems are approximately perpendicular to each other, with a dihedral angle of 89.3 (5)°; the plane of the benzene ring is oriented with respect to the indole ring systems at 49.9 (5) and 73.4 (3)°. In the crystal, mol-ecules are linked by N-H⋯O and O-H⋯O hydrogen bonds and weak C-H⋯π inter-actions into a three-dimensional supra-molecular architecture. A void of 33.0 (7) Å(3) is observed in the crystal structure. The solvent ethanol molecule acts as a donor, forming an O-H⋯O hydrogen bond, reinforcing the framework structure.

Entities:  

Keywords:  MRI contrast agent; crystal structure; indole

Year:  2014        PMID: 25484748      PMCID: PMC4257280          DOI: 10.1107/S1600536814022296

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Chemical context

Indole derivatives are found abundantly in a variety of natural plants and exhibit various physiological properties (Poter et al., 1977 ▶; Sundberg, 1996 ▶). Among them, bis-indolymethane derivatives are found to be potentially bioactive compounds (Chang et al., 1999 ▶; Ge et al., 1999 ▶). In recent years, the synthesis and application of bis-indolymethane derivatives have been widely studied. The title compound is one of the bis-indolymethane derivatives as a precursor for MRI contrast agents (Ni, 2008 ▶). We report herein the synthesis and crystal structure of the title compound.

Structural commentary

The mol­ecular structure of the title compound is shown in Fig. 1 ▶. The two indole ring systems are nearly perpendicular to each other [dihedral angle = 89.3 (5)°] while the benzene ring (C1–C6) is twisted to the N1/C8–C15 and N2/C18–C25 indole ring systems with dihedral angles of 49.9 (5) and 73.4 (3)°, respectively. The carboxyl groups are approximately coplanar with the attached indole ring systems, the dihedral angles between the carboxyl groups and the mean plane of attached indole ring system are 10.0 (3) and 4.0 (4)°. The nitro group is also nearly coplanar with the attached benzene ring, the dihedral angle being 7.7 (7)°. A void of 33.0 (7) Å3 is observed in the crystal structure. The solvent ethanol molecule acts as a donor, forming an O—H⋯O hydrogen bond, reinforcing the framework structure.
Figure 1

The mol­ecular structure of the title mol­ecule. showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level. The dashed line indicates the hydrogen bond between the main molecule and the ethanol solvent molecule.

Supra­molecular features

In the crystal, the organic mol­ecules and ethanol solvent mol­ecules are linked by classic N—H⋯O and O—H⋯O hydrogen bonds and weak C—H⋯π inter­actions involved the benzene rings, forming the three-dimensional supra­molecular architecture (Table 1 ▶).
Table 1

Hydrogen-bond geometry (, )

Cg3, Cg4 and Cg5 are the centroids of the C1-ring, C10-ring and C20-ring, respectively.

DHA DHHA D A DHA
N2H2AO7i 0.862.172.924(3)146
N3H3AO4ii 0.862.022.861(4)166
O7H7BO50.822.132.892(4)154
C10H10A Cg30.932.873.633(4)140
C11H11A Cg5iii 0.932.763.634(4)156
C17H17B Cg4i 0.962.893.813(5)163
C27H27B Cg5ii 0.962.753.496(4)135

Symmetry codes: (i) ; (ii) ; (iii) .

Database survey

Several similar structures have been reported previously, i.e. diethyl 3,3′-(phenyl­methyl­ene)bis­(1H-indole-2-carboxyl­ate) (Sun et al., 2012 ▶) and dimethyl 3,3′-(phenyl­methyl­ene)bis­(1H-indole-2-carboxyl­ate) (Sun et al., 2013 ▶). In those structures, the two indole ring systems are also nearly perpendicular to each other, the dihedral angles are 82.0 (5) and 84.5 (5)°, respectively.

Synthesis and crystallization

Methyl indole-2-carboxyl­ate (17.5 g, 100 mmol) was dissolved in 200 ml methanol; commercially available 3-nitro­benzaldehyde (7.6 g, 50 mmol) was added and the mixture was heated to reflux temperature. Concentrated HCl (3.7 ml) was added and the reaction was left for 1 h. After cooling the white product was filtered off and washed thoroughly with methanol. The reaction can be followed by thin-layer chromatography (CHCl3–hexane = 1:1 v/v). The yield was 90%. Crystals of the title compound suitable for X-ray analysis were obtained by slow evaporation of an ethanol solution.

Refinement

H atoms were positioned geometrically, with N—H = 0.86Å and O—H = 0.82Å, and C—H = 0.93, 0.96, 0.97 or 0.98 Å for aromatic, methyl, methene and methine H atom, respectively, and constrained to ride on their parent atoms, with U iso(H) = xU eq(C,N,O), where x = 1.5 for methyl and hy­droxy, and x = 1.2 for all other H atoms. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536814022296/xu5823sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814022296/xu5823Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814022296/xu5823Isup3.cml CCDC reference: 1028397 Additional supporting information: crystallographic information; 3D view; checkCIF report
C27H21N3O6·C2H6OZ = 2
Mr = 529.54F(000) = 556
Triclinic, P1Dx = 1.281 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 11.074 (2) ÅCell parameters from 25 reflections
b = 11.585 (2) Åθ = 9–13°
c = 12.898 (3) ŵ = 0.09 mm1
α = 114.09 (3)°T = 293 K
β = 106.68 (3)°Block, colorless
γ = 99.20 (3)°0.30 × 0.20 × 0.10 mm
V = 1372.5 (5) Å3
Enraf–Nonius CAD-4 diffractometer3254 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.029
Graphite monochromatorθmax = 25.4°, θmin = 1.9°
ω/2θ scansh = 0→13
Absorption correction: ψ scan (North et al., 1968)k = −13→13
Tmin = 0.973, Tmax = 0.991l = −15→14
5313 measured reflections3 standard reflections every 200 reflections
5032 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.059Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.166H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0769P)2 + 0.4188P] where P = (Fo2 + 2Fc2)/3
5032 reflections(Δ/σ)max = 0.001
352 parametersΔρmax = 0.19 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.4712 (3)−0.2518 (3)0.0074 (4)0.0901 (11)
N21.1545 (2)0.0075 (2)0.4249 (2)0.0438 (6)
H2A1.21510.01230.48700.053*
N30.9859 (2)0.4742 (2)0.3448 (2)0.0414 (5)
H3A0.97400.55070.36500.050*
O10.4711 (3)−0.2634 (3)0.0977 (4)0.1266 (13)
O20.3872 (3)−0.3273 (3)−0.0959 (3)0.1360 (14)
O31.1911 (2)0.21184 (19)0.64357 (18)0.0599 (6)
O41.0053 (2)0.25277 (18)0.55999 (17)0.0506 (5)
O50.71167 (19)0.2865 (2)0.36509 (19)0.0548 (5)
O60.77081 (18)0.49394 (18)0.39092 (18)0.0504 (5)
O70.6624 (2)0.0902 (2)0.4450 (2)0.0733 (7)
H7B0.70180.14890.43540.110*
C10.6788 (3)−0.0661 (3)0.1405 (3)0.0490 (7)
H1A0.6817−0.08460.20470.059*
C20.5754 (3)−0.1429 (3)0.0248 (3)0.0565 (8)
C30.5662 (3)−0.1189 (3)−0.0723 (3)0.0616 (9)
H3B0.4956−0.1715−0.14840.074*
C40.6637 (3)−0.0153 (3)−0.0543 (3)0.0607 (9)
H4A0.66030.0025−0.11900.073*
C50.7674 (3)0.0629 (3)0.0598 (3)0.0497 (7)
H5A0.83230.13370.07100.060*
C60.7767 (3)0.0382 (2)0.1580 (2)0.0395 (6)
C70.8906 (2)0.1240 (2)0.2847 (2)0.0361 (6)
H7A0.84950.13900.34510.043*
C80.9896 (2)0.0532 (2)0.3134 (2)0.0354 (6)
C91.0194 (3)−0.0546 (2)0.2304 (2)0.0389 (6)
C100.9715 (3)−0.1346 (3)0.1015 (3)0.0484 (7)
H10A0.9044−0.12070.04970.058*
C111.0243 (3)−0.2330 (3)0.0530 (3)0.0598 (8)
H11A0.9910−0.2870−0.03210.072*
C121.1276 (3)−0.2544 (3)0.1288 (3)0.0609 (9)
H12A1.1624−0.32110.09300.073*
C131.1778 (3)−0.1789 (3)0.2542 (3)0.0524 (8)
H13A1.2462−0.19310.30440.063*
C141.1231 (3)−0.0798 (3)0.3043 (2)0.0410 (6)
C151.0733 (3)0.0872 (2)0.4314 (2)0.0390 (6)
C161.0840 (3)0.1913 (3)0.5490 (2)0.0425 (7)
C171.2112 (4)0.3165 (3)0.7644 (3)0.0695 (10)
H17A1.29000.32340.82550.104*
H17B1.13600.29520.78380.104*
H17C1.22080.39990.76350.104*
C180.9553 (2)0.2606 (2)0.3046 (2)0.0359 (6)
C191.0709 (3)0.3062 (2)0.2854 (2)0.0378 (6)
C201.1640 (3)0.2491 (3)0.2473 (3)0.0477 (7)
H20A1.15770.16150.22920.057*
C211.2643 (3)0.3253 (3)0.2377 (3)0.0624 (9)
H21A1.32580.28800.21230.075*
C221.2763 (3)0.4570 (3)0.2648 (3)0.0631 (9)
H22A1.34560.50540.25700.076*
C231.1893 (3)0.5166 (3)0.3023 (3)0.0529 (8)
H23A1.19800.60470.32080.064*
C241.0863 (3)0.4401 (3)0.3120 (2)0.0399 (6)
C250.9066 (2)0.3671 (2)0.3405 (2)0.0366 (6)
C260.7876 (3)0.3752 (3)0.3664 (2)0.0394 (6)
C270.6529 (3)0.5128 (3)0.4122 (3)0.0663 (9)
H27A0.65160.60110.42850.099*
H27B0.65300.50130.48190.099*
H27C0.57570.44850.34050.099*
C280.5250 (4)0.0591 (4)0.3849 (4)0.0870 (12)
H28A0.4800−0.02020.38450.104*
H28B0.50490.03840.29980.104*
C290.4715 (4)0.1671 (5)0.4421 (5)0.1096 (17)
H29A0.37720.13880.39690.164*
H29B0.51310.24520.44040.164*
H29C0.48940.18720.52600.164*
U11U22U33U12U13U23
N10.062 (2)0.059 (2)0.101 (3)−0.0028 (16)0.000 (2)0.025 (2)
N20.0404 (13)0.0425 (13)0.0432 (14)0.0130 (11)0.0046 (10)0.0235 (11)
N30.0425 (13)0.0313 (11)0.0503 (14)0.0153 (10)0.0173 (11)0.0187 (10)
O10.096 (2)0.107 (3)0.129 (3)−0.0288 (19)0.014 (2)0.057 (2)
O20.102 (2)0.087 (2)0.109 (3)−0.0398 (19)−0.024 (2)0.0179 (19)
O30.0643 (14)0.0489 (12)0.0396 (12)0.0150 (10)−0.0031 (10)0.0140 (10)
O40.0582 (13)0.0395 (11)0.0457 (12)0.0168 (10)0.0147 (10)0.0163 (9)
O50.0454 (12)0.0523 (12)0.0729 (15)0.0170 (10)0.0255 (11)0.0333 (11)
O60.0448 (11)0.0443 (11)0.0645 (13)0.0227 (9)0.0227 (10)0.0243 (10)
O70.0597 (14)0.0859 (17)0.0859 (17)0.0228 (13)0.0164 (13)0.0598 (15)
C10.0440 (16)0.0369 (15)0.0531 (18)0.0118 (13)0.0097 (14)0.0166 (13)
C20.0388 (16)0.0382 (16)0.064 (2)0.0084 (13)0.0055 (15)0.0110 (15)
C30.0479 (19)0.054 (2)0.0476 (19)0.0224 (16)−0.0033 (15)0.0054 (15)
C40.060 (2)0.065 (2)0.0404 (17)0.0271 (18)0.0054 (15)0.0173 (15)
C50.0463 (17)0.0507 (17)0.0430 (17)0.0149 (14)0.0090 (14)0.0203 (14)
C60.0372 (14)0.0332 (14)0.0385 (15)0.0163 (12)0.0081 (12)0.0114 (12)
C70.0359 (14)0.0326 (13)0.0357 (14)0.0115 (11)0.0112 (11)0.0142 (11)
C80.0331 (14)0.0305 (13)0.0385 (15)0.0076 (11)0.0090 (11)0.0171 (11)
C90.0396 (15)0.0355 (14)0.0413 (15)0.0124 (12)0.0117 (12)0.0207 (12)
C100.0544 (18)0.0459 (16)0.0425 (17)0.0196 (14)0.0143 (14)0.0208 (14)
C110.077 (2)0.0561 (19)0.0492 (18)0.0301 (18)0.0282 (17)0.0225 (15)
C120.073 (2)0.0516 (18)0.071 (2)0.0364 (17)0.0347 (19)0.0298 (17)
C130.0521 (18)0.0464 (17)0.063 (2)0.0234 (14)0.0187 (16)0.0296 (16)
C140.0419 (15)0.0367 (14)0.0438 (16)0.0112 (12)0.0134 (13)0.0215 (13)
C150.0394 (15)0.0315 (13)0.0419 (15)0.0086 (12)0.0096 (12)0.0189 (12)
C160.0462 (16)0.0325 (14)0.0395 (16)0.0052 (13)0.0062 (13)0.0185 (12)
C170.086 (3)0.0516 (19)0.0377 (18)0.0107 (18)−0.0004 (17)0.0122 (15)
C180.0348 (14)0.0337 (13)0.0319 (14)0.0104 (11)0.0062 (11)0.0141 (11)
C190.0365 (14)0.0350 (14)0.0348 (14)0.0113 (12)0.0090 (12)0.0139 (12)
C200.0458 (17)0.0403 (15)0.0557 (18)0.0156 (13)0.0210 (14)0.0205 (14)
C210.053 (2)0.063 (2)0.074 (2)0.0243 (17)0.0356 (18)0.0269 (18)
C220.0520 (19)0.056 (2)0.083 (2)0.0128 (16)0.0345 (18)0.0313 (18)
C230.0534 (18)0.0423 (16)0.065 (2)0.0129 (15)0.0245 (16)0.0278 (15)
C240.0390 (15)0.0374 (14)0.0397 (15)0.0115 (12)0.0118 (12)0.0179 (12)
C250.0358 (14)0.0320 (13)0.0357 (14)0.0108 (11)0.0088 (11)0.0141 (11)
C260.0351 (14)0.0378 (15)0.0394 (15)0.0115 (12)0.0085 (12)0.0174 (12)
C270.0509 (19)0.071 (2)0.085 (3)0.0347 (17)0.0318 (18)0.035 (2)
C280.062 (2)0.098 (3)0.091 (3)0.010 (2)0.005 (2)0.059 (3)
C290.070 (3)0.117 (4)0.187 (5)0.039 (3)0.061 (3)0.103 (4)
N1—O21.218 (4)C10—C111.369 (4)
N1—O11.226 (5)C10—H10A0.9300
N1—C21.459 (5)C11—C121.404 (4)
N2—C141.362 (3)C11—H11A0.9300
N2—C151.383 (3)C12—C131.364 (4)
N2—H2A0.8600C12—H12A0.9300
N3—C241.358 (3)C13—C141.395 (4)
N3—C251.372 (3)C13—H13A0.9300
N3—H3A0.8600C15—C161.458 (4)
O3—C161.339 (3)C17—H17A0.9600
O3—C171.456 (4)C17—H17B0.9600
O4—C161.214 (3)C17—H17C0.9600
O5—C261.211 (3)C18—C251.385 (3)
O6—C261.337 (3)C18—C191.433 (4)
O6—C271.441 (3)C19—C201.409 (4)
O7—C281.402 (4)C19—C241.414 (4)
O7—H7B0.8200C20—C211.372 (4)
C1—C61.380 (4)C20—H20A0.9300
C1—C21.393 (4)C21—C221.393 (4)
C1—H1A0.9300C21—H21A0.9300
C2—C31.370 (5)C22—C231.359 (4)
C3—C41.369 (5)C22—H22A0.9300
C3—H3B0.9300C23—C241.397 (4)
C4—C51.384 (4)C23—H23A0.9300
C4—H4A0.9300C25—C261.457 (4)
C5—C61.388 (4)C27—H27A0.9600
C5—H5A0.9300C27—H27B0.9600
C6—C71.529 (4)C27—H27C0.9600
C7—C181.511 (3)C28—C291.482 (6)
C7—C81.521 (3)C28—H28A0.9700
C7—H7A0.9800C28—H28B0.9700
C8—C151.384 (3)C29—H29A0.9600
C8—C91.435 (4)C29—H29B0.9600
C9—C101.408 (4)C29—H29C0.9600
C9—C141.420 (4)
O2—N1—O1122.4 (4)N2—C15—C8109.5 (2)
O2—N1—C2118.9 (4)N2—C15—C16121.9 (2)
O1—N1—C2118.7 (3)C8—C15—C16128.6 (2)
C14—N2—C15109.2 (2)O4—C16—O3123.8 (3)
C14—N2—H2A125.4O4—C16—C15123.9 (2)
C15—N2—H2A125.4O3—C16—C15112.2 (2)
C24—N3—C25109.1 (2)O3—C17—H17A109.5
C24—N3—H3A125.4O3—C17—H17B109.5
C25—N3—H3A125.4H17A—C17—H17B109.5
C16—O3—C17115.9 (2)O3—C17—H17C109.5
C26—O6—C27117.0 (2)H17A—C17—H17C109.5
C28—O7—H7B109.5H17B—C17—H17C109.5
C6—C1—C2118.6 (3)C25—C18—C19105.9 (2)
C6—C1—H1A120.7C25—C18—C7124.8 (2)
C2—C1—H1A120.7C19—C18—C7129.2 (2)
C3—C2—C1122.8 (3)C20—C19—C24117.8 (2)
C3—C2—N1118.8 (3)C20—C19—C18135.2 (2)
C1—C2—N1118.3 (3)C24—C19—C18107.0 (2)
C4—C3—C2118.2 (3)C21—C20—C19118.7 (3)
C4—C3—H3B120.9C21—C20—H20A120.6
C2—C3—H3B120.9C19—C20—H20A120.6
C3—C4—C5120.2 (3)C20—C21—C22121.8 (3)
C3—C4—H4A119.9C20—C21—H21A119.1
C5—C4—H4A119.9C22—C21—H21A119.1
C4—C5—C6121.5 (3)C23—C22—C21121.6 (3)
C4—C5—H5A119.2C23—C22—H22A119.2
C6—C5—H5A119.2C21—C22—H22A119.2
C1—C6—C5118.6 (3)C22—C23—C24117.3 (3)
C1—C6—C7119.3 (2)C22—C23—H23A121.4
C5—C6—C7122.1 (2)C24—C23—H23A121.4
C18—C7—C8113.3 (2)N3—C24—C23129.1 (2)
C18—C7—C6112.2 (2)N3—C24—C19108.2 (2)
C8—C7—C6113.1 (2)C23—C24—C19122.8 (3)
C18—C7—H7A105.8N3—C25—C18109.9 (2)
C8—C7—H7A105.8N3—C25—C26120.3 (2)
C6—C7—H7A105.8C18—C25—C26129.7 (2)
C15—C8—C9106.5 (2)O5—C26—O6123.4 (2)
C15—C8—C7124.1 (2)O5—C26—C25125.2 (2)
C9—C8—C7129.4 (2)O6—C26—C25111.4 (2)
C10—C9—C14117.5 (2)O6—C27—H27A109.5
C10—C9—C8135.7 (2)O6—C27—H27B109.5
C14—C9—C8106.8 (2)H27A—C27—H27B109.5
C11—C10—C9119.5 (3)O6—C27—H27C109.5
C11—C10—H10A120.3H27A—C27—H27C109.5
C9—C10—H10A120.3H27B—C27—H27C109.5
C10—C11—C12121.5 (3)O7—C28—C29114.0 (4)
C10—C11—H11A119.2O7—C28—H28A108.8
C12—C11—H11A119.2C29—C28—H28A108.8
C13—C12—C11121.1 (3)O7—C28—H28B108.8
C13—C12—H12A119.4C29—C28—H28B108.8
C11—C12—H12A119.4H28A—C28—H28B107.7
C12—C13—C14117.7 (3)C28—C29—H29A109.5
C12—C13—H13A121.2C28—C29—H29B109.5
C14—C13—H13A121.2H29A—C29—H29B109.5
N2—C14—C13129.2 (3)C28—C29—H29C109.5
N2—C14—C9108.1 (2)H29A—C29—H29C109.5
C13—C14—C9122.7 (3)H29B—C29—H29C109.5
C6—C1—C2—C3−0.5 (4)C7—C8—C15—N2−177.3 (2)
C6—C1—C2—N1−179.1 (3)C9—C8—C15—C16179.5 (3)
O2—N1—C2—C38.1 (5)C7—C8—C15—C161.0 (4)
O1—N1—C2—C3−171.5 (4)C17—O3—C16—O4−1.0 (4)
O2—N1—C2—C1−173.3 (3)C17—O3—C16—C15178.6 (2)
O1—N1—C2—C17.1 (5)N2—C15—C16—O4−171.1 (2)
C1—C2—C3—C40.6 (5)C8—C15—C16—O410.7 (4)
N1—C2—C3—C4179.1 (3)N2—C15—C16—O39.3 (4)
C2—C3—C4—C5−0.7 (5)C8—C15—C16—O3−168.9 (3)
C3—C4—C5—C60.9 (5)C8—C7—C18—C25−149.2 (2)
C2—C1—C6—C50.6 (4)C6—C7—C18—C2581.3 (3)
C2—C1—C6—C7179.7 (2)C8—C7—C18—C1934.6 (4)
C4—C5—C6—C1−0.8 (4)C6—C7—C18—C19−95.0 (3)
C4—C5—C6—C7−179.9 (2)C25—C18—C19—C20−178.9 (3)
C1—C6—C7—C18−157.0 (2)C7—C18—C19—C20−2.1 (5)
C5—C6—C7—C1822.1 (3)C25—C18—C19—C240.5 (3)
C1—C6—C7—C873.4 (3)C7—C18—C19—C24177.3 (2)
C5—C6—C7—C8−107.6 (3)C24—C19—C20—C21−0.2 (4)
C18—C7—C8—C1573.3 (3)C18—C19—C20—C21179.1 (3)
C6—C7—C8—C15−157.5 (2)C19—C20—C21—C220.2 (5)
C18—C7—C8—C9−104.8 (3)C20—C21—C22—C230.0 (5)
C6—C7—C8—C924.3 (4)C21—C22—C23—C24−0.4 (5)
C15—C8—C9—C10179.2 (3)C25—N3—C24—C23179.3 (3)
C7—C8—C9—C10−2.4 (5)C25—N3—C24—C190.2 (3)
C15—C8—C9—C14−0.7 (3)C22—C23—C24—N3−178.7 (3)
C7—C8—C9—C14177.7 (2)C22—C23—C24—C190.4 (4)
C14—C9—C10—C110.8 (4)C20—C19—C24—N3179.1 (2)
C8—C9—C10—C11−179.1 (3)C18—C19—C24—N3−0.4 (3)
C9—C10—C11—C12−1.4 (5)C20—C19—C24—C23−0.1 (4)
C10—C11—C12—C131.1 (5)C18—C19—C24—C23−179.6 (3)
C11—C12—C13—C14−0.1 (5)C24—N3—C25—C180.1 (3)
C15—N2—C14—C13−179.4 (3)C24—N3—C25—C26−177.3 (2)
C15—N2—C14—C90.8 (3)C19—C18—C25—N3−0.4 (3)
C12—C13—C14—N2179.7 (3)C7—C18—C25—N3−177.4 (2)
C12—C13—C14—C9−0.5 (4)C19—C18—C25—C26176.8 (2)
C10—C9—C14—N2−180.0 (2)C7—C18—C25—C26−0.2 (4)
C8—C9—C14—N2−0.1 (3)C27—O6—C26—O5−2.3 (4)
C10—C9—C14—C130.2 (4)C27—O6—C26—C25177.0 (2)
C8—C9—C14—C13−179.9 (3)N3—C25—C26—O5−179.9 (2)
C14—N2—C15—C8−1.2 (3)C18—C25—C26—O53.2 (4)
C14—N2—C15—C16−179.7 (2)N3—C25—C26—O60.8 (3)
C9—C8—C15—N21.2 (3)C18—C25—C26—O6−176.1 (2)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O7i0.862.172.924 (3)146
N3—H3A···O4ii0.862.022.861 (4)166
O7—H7B···O50.822.132.892 (4)154
C10—H10A···Cg30.932.873.633 (4)140
C11—H11A···Cg5iii0.932.763.634 (4)156
C17—H17B···Cg4i0.962.893.813 (5)163
C27—H27B···Cg5ii0.962.753.496 (4)135
Table 2

Experimental details

Crystal data
Chemical formulaC27H21N3O6C2H6O
M r 529.54
Crystal system, space groupTriclinic, P
Temperature (K)293
a, b, c ()11.074(2), 11.585(2), 12.898(3)
, , ()114.09(3), 106.68(3), 99.20(3)
V (3)1372.5(5)
Z 2
Radiation typeMo K
(mm1)0.09
Crystal size (mm)0.30 0.20 0.10
 
Data collection
DiffractometerEnrafNonius CAD-4
Absorption correction scan (North et al., 1968)
T min, T max 0.973, 0.991
No. of measured, independent and observed [I > 2(I)] reflections5313, 5032, 3254
R int 0.029
(sin /)max (1)0.604
 
Refinement
R[F 2 > 2(F 2)], wR(F 2), S 0.059, 0.166, 1.04
No. of reflections5032
No. of parameters352
H-atom treatmentH-atom parameters constrained
max, min (e 3)0.19, 0.26

Computer programs: CAD-4 EXPRESS (EnrafNonius, 1994 ▶), XCAD4 (Harms Wocadlo, 1995 ▶) and SHELXTL (Sheldrick, 2008 ▶).

  5 in total

1.  Induction of apoptosis in MCF-7 cells by indole-3-carbinol is independent of p53 and bax.

Authors:  X Ge; F A Fares; S Yannai
Journal:  Anticancer Res       Date:  1999 Jul-Aug       Impact factor: 2.480

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Cytostatic and antiestrogenic effects of 2-(indol-3-ylmethyl)-3,3'-diindolylmethane, a major in vivo product of dietary indole-3-carbinol.

Authors:  Y C Chang; J Riby; G H Chang; B C Peng; G Firestone; L F Bjeldanes
Journal:  Biochem Pharmacol       Date:  1999-09-01       Impact factor: 5.858

4.  Diethyl 3,3'-(phenyl-methyl-ene)bis-(1H-indole-2-carboxyl-ate).

Authors:  Hong-Shun Sun; Yu-Long Li; Ning Xu; Hong Xu; Ji-Dong Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-25

5.  Dimethyl 3,3'-(phenyl-methyl-ene)bis-(1H-indole-2-carboxyl-ate).

Authors:  Hong-Shun Sun; Yu-Long Li; Ning Xu; Hong Xu; Ji-Dong Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-09-07
  5 in total
  2 in total

1.  Crystal structure of dimethyl 3,3'-[(3-fluoro-phenyl)methyl-ene]bis-(1H-indole-2-carboxyl-ate).

Authors:  Xin-Hua Lu; Hong-Shun Sun; Jin Hu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-11-29

2.  Crystal structure of dimethyl 3,3'-[(4-fluoro-phen-yl)methyl-ene]bis-(1H-indole-2-carboxyl-ate).

Authors:  Hong-Shun Sun; Yu-Long Li; Hong Jiang; Ning Xu; Hong Xu
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-09-12
  2 in total

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