| Literature DB >> 25484680 |
Wen-Juan Cai1, Bo Liu1, Feng-Yi Liu1, Jun-Feng Kou1.
Abstract
In the title complex, [Co(C15H6ClO4)2(H2O)4]·2H2O, the Co(II) ion is bound by two carboxylate O atoms of two 5-chloro-9,10-anthra-quinone-1-carboxyl-ate anions and four water O atoms in a trans conformation, forming an irregular octa-hedral coordination geometry. This arrangement is stabilized by intra-molecular O-H⋯O hydrogen bonds between water and carboxyl-ate. Further O-H⋯O hydrogen bonds between coordinating and non-coordinating water and carboxyl-ate produce layers of mol-ecules that extend parallel to (001). The organic ligands project above and below the plane. Those ligands of adjacent planes are inter-digitated and there are π-π inter-actions between them with centroid-centroid distances of 3.552 (2) and 3.767 (2) Å that generate a three-dimensional supra-molecular structure.Entities:
Keywords: antitumor; cobalt; crystal structure; hydrogen bond
Year: 2014 PMID: 25484680 PMCID: PMC4257216 DOI: 10.1107/S1600536814020972
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C15H6ClO4)2(H2O)4]·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 25 reflections | |
| θ = 3.1–25.0° | |
| µ = 0.84 mm−1 | |
| α = 73.97 (3)° | |
| β = 88.86 (3)° | Block, red |
| γ = 73.35 (3)° | 0.22 × 0.19 × 0.17 mm |
| Rigaku MM007-HF CCD (Saturn 724+) diffractometer | 3329 independent reflections |
| Radiation source: rotating anode | 2171 reflections with |
| Confocal monochromator | |
| ω scans at fixed χ = 45° | θmax = 27.5°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 7246 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3329 reflections | (Δ/σ)max < 0.001 |
| 235 parameters | Δρmax = 0.59 e Å−3 |
| 9 restraints | Δρmin = −0.64 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.5000 | 0.0000 | 0.5000 | 0.0521 (3) | |
| O1 | 0.2123 (5) | 0.3055 (4) | 1.0202 (2) | 0.0734 (8) | |
| O2 | 0.2651 (4) | −0.0771 (3) | 0.76542 (19) | 0.0618 (7) | |
| O3 | 0.3637 (4) | 0.1703 (3) | 0.58318 (18) | 0.0565 (6) | |
| O4 | 0.0299 (4) | 0.1985 (4) | 0.5694 (2) | 0.0631 (7) | |
| O5 | 0.4564 (6) | −0.2191 (4) | 0.6077 (2) | 0.0798 (10) | |
| H5A | 0.431 (8) | −0.222 (7) | 0.663 (3) | 0.101 (9)* | |
| H5B | 0.469 (8) | −0.317 (5) | 0.607 (4) | 0.101 (9)* | |
| O6 | 0.2118 (5) | 0.0420 (4) | 0.4326 (2) | 0.0664 (8) | |
| H6A | 0.181 (8) | −0.050 (6) | 0.442 (4) | 0.101 (9)* | |
| H6B | 0.141 (7) | 0.079 (7) | 0.474 (3) | 0.101 (9)* | |
| O7 | 0.6143 (6) | 0.4206 (5) | 0.6095 (3) | 0.0832 (9) | |
| H7A | 0.724 (7) | 0.371 (10) | 0.591 (6) | 0.16 (2)* | |
| H7B | 0.527 (8) | 0.385 (10) | 0.594 (6) | 0.16 (2)* | |
| C1 | 0.1499 (5) | 0.3019 (5) | 0.6896 (3) | 0.0497 (8) | |
| C2 | 0.0846 (6) | 0.4864 (5) | 0.6614 (3) | 0.0624 (10) | |
| H2 | 0.0601 | 0.5482 | 0.5955 | 0.075* | |
| C3 | 0.0552 (7) | 0.5804 (5) | 0.7312 (3) | 0.0666 (11) | |
| H3 | 0.0103 | 0.7043 | 0.7116 | 0.080* | |
| C4 | 0.0924 (6) | 0.4908 (5) | 0.8284 (3) | 0.0590 (10) | |
| H4 | 0.0715 | 0.5541 | 0.8746 | 0.071* | |
| C5 | 0.2727 (5) | −0.0750 (5) | 1.0984 (3) | 0.0506 (8) | |
| C6 | 0.3092 (5) | −0.2598 (5) | 1.1281 (3) | 0.0583 (9) | |
| H6 | 0.3266 | −0.3212 | 1.1942 | 0.070* | |
| C7 | 0.3193 (6) | −0.3514 (5) | 1.0589 (3) | 0.0619 (10) | |
| H7 | 0.3390 | −0.4738 | 1.0783 | 0.074* | |
| C8 | 0.3001 (6) | −0.2605 (5) | 0.9614 (3) | 0.0562 (9) | |
| H8 | 0.3107 | −0.3230 | 0.9152 | 0.067* | |
| C9 | 0.2065 (5) | 0.2169 (5) | 0.9648 (3) | 0.0508 (8) | |
| C10 | 0.2436 (5) | 0.0117 (5) | 0.8235 (3) | 0.0466 (8) | |
| C11 | 0.1858 (5) | 0.2093 (5) | 0.7891 (3) | 0.0476 (8) | |
| C12 | 0.1613 (5) | 0.3057 (5) | 0.8584 (3) | 0.0482 (8) | |
| C13 | 0.2495 (5) | 0.0193 (5) | 1.0001 (2) | 0.0459 (8) | |
| C14 | 0.2651 (5) | −0.0773 (5) | 0.9307 (3) | 0.0477 (8) | |
| C15 | 0.1838 (6) | 0.2122 (5) | 0.6087 (3) | 0.0525 (8) | |
| Cl1 | 0.25829 (17) | 0.02230 (15) | 1.19317 (7) | 0.0696 (3) |
| Co1 | 0.0629 (5) | 0.0479 (4) | 0.0531 (4) | −0.0121 (3) | 0.0195 (3) | −0.0316 (3) |
| O1 | 0.106 (2) | 0.0652 (17) | 0.0646 (17) | −0.0219 (16) | 0.0088 (16) | −0.0472 (14) |
| O2 | 0.0817 (18) | 0.0561 (14) | 0.0632 (16) | −0.0195 (13) | 0.0199 (13) | −0.0434 (12) |
| O3 | 0.0627 (15) | 0.0581 (15) | 0.0598 (15) | −0.0146 (12) | 0.0214 (12) | −0.0389 (12) |
| O4 | 0.0655 (16) | 0.0728 (18) | 0.0649 (16) | −0.0171 (14) | 0.0081 (13) | −0.0453 (14) |
| O5 | 0.121 (3) | 0.0548 (16) | 0.0705 (19) | −0.0255 (17) | 0.0424 (19) | −0.0311 (15) |
| O6 | 0.0744 (19) | 0.0636 (17) | 0.0722 (19) | −0.0160 (14) | 0.0169 (14) | −0.0419 (15) |
| O7 | 0.083 (2) | 0.065 (2) | 0.104 (3) | −0.0127 (17) | 0.012 (2) | −0.0370 (18) |
| C1 | 0.0487 (18) | 0.0543 (19) | 0.055 (2) | −0.0088 (15) | 0.0092 (15) | −0.0359 (16) |
| C2 | 0.076 (3) | 0.054 (2) | 0.058 (2) | −0.0064 (19) | 0.0075 (19) | −0.0311 (18) |
| C3 | 0.082 (3) | 0.050 (2) | 0.073 (3) | −0.0062 (19) | 0.009 (2) | −0.0377 (19) |
| C4 | 0.067 (2) | 0.056 (2) | 0.066 (2) | −0.0103 (18) | 0.0129 (19) | −0.0445 (19) |
| C5 | 0.0410 (17) | 0.065 (2) | 0.056 (2) | −0.0157 (16) | 0.0121 (15) | −0.0355 (17) |
| C6 | 0.054 (2) | 0.063 (2) | 0.062 (2) | −0.0151 (18) | 0.0108 (17) | −0.0269 (18) |
| C7 | 0.061 (2) | 0.055 (2) | 0.075 (3) | −0.0146 (18) | 0.0123 (19) | −0.0302 (19) |
| C8 | 0.055 (2) | 0.058 (2) | 0.070 (2) | −0.0168 (17) | 0.0136 (18) | −0.0410 (19) |
| C9 | 0.0468 (18) | 0.058 (2) | 0.061 (2) | −0.0128 (15) | 0.0140 (16) | −0.0421 (17) |
| C10 | 0.0423 (17) | 0.0548 (19) | 0.057 (2) | −0.0143 (15) | 0.0128 (15) | −0.0385 (16) |
| C11 | 0.0428 (17) | 0.0524 (18) | 0.060 (2) | −0.0111 (15) | 0.0124 (15) | −0.0387 (16) |
| C12 | 0.0446 (17) | 0.0546 (19) | 0.058 (2) | −0.0133 (15) | 0.0136 (15) | −0.0384 (16) |
| C13 | 0.0394 (16) | 0.0551 (19) | 0.0528 (19) | −0.0117 (14) | 0.0112 (14) | −0.0332 (16) |
| C14 | 0.0404 (16) | 0.0548 (19) | 0.059 (2) | −0.0126 (15) | 0.0102 (15) | −0.0346 (16) |
| C15 | 0.065 (2) | 0.0494 (19) | 0.0489 (19) | −0.0108 (17) | 0.0078 (17) | −0.0300 (15) |
| Cl1 | 0.0773 (7) | 0.0832 (7) | 0.0594 (6) | −0.0203 (6) | 0.0136 (5) | −0.0419 (5) |
| Co1—O3i | 2.083 (2) | C2—H2 | 0.9300 |
| Co1—O3 | 2.083 (2) | C3—C4 | 1.369 (6) |
| Co1—O5i | 2.104 (3) | C3—H3 | 0.9300 |
| Co1—O5 | 2.104 (3) | C4—C12 | 1.390 (5) |
| Co1—O6i | 2.113 (3) | C4—H4 | 0.9300 |
| Co1—O6 | 2.113 (3) | C5—C13 | 1.390 (5) |
| O1—C9 | 1.219 (4) | C5—C6 | 1.397 (5) |
| O2—C10 | 1.225 (4) | C5—Cl1 | 1.737 (3) |
| O3—C15 | 1.259 (4) | C6—C7 | 1.385 (5) |
| O4—C15 | 1.253 (4) | C6—H6 | 0.9300 |
| O5—H5A | 0.81 (3) | C7—C8 | 1.373 (6) |
| O5—H5B | 0.78 (3) | C7—H7 | 0.9300 |
| O6—H6A | 0.82 (3) | C8—C14 | 1.387 (5) |
| O6—H6B | 0.82 (3) | C8—H8 | 0.9300 |
| O7—H7A | 0.82 (3) | C9—C12 | 1.487 (5) |
| O7—H7B | 0.80 (4) | C9—C13 | 1.492 (5) |
| C1—C2 | 1.385 (5) | C10—C11 | 1.485 (5) |
| C1—C11 | 1.402 (5) | C10—C14 | 1.493 (5) |
| C1—C15 | 1.511 (4) | C11—C12 | 1.405 (4) |
| C2—C3 | 1.395 (5) | C13—C14 | 1.412 (4) |
| O3i—Co1—O3 | 180.00 (10) | C12—C4—H4 | 119.8 |
| O3i—Co1—O5i | 90.64 (11) | C13—C5—C6 | 121.2 (3) |
| O3—Co1—O5i | 89.36 (11) | C13—C5—Cl1 | 124.1 (3) |
| O3i—Co1—O5 | 89.36 (11) | C6—C5—Cl1 | 114.7 (3) |
| O3—Co1—O5 | 90.64 (11) | C7—C6—C5 | 119.8 (4) |
| O5i—Co1—O5 | 180.0 | C7—C6—H6 | 120.1 |
| O3i—Co1—O6i | 89.78 (11) | C5—C6—H6 | 120.1 |
| O3—Co1—O6i | 90.22 (11) | C8—C7—C6 | 119.7 (4) |
| O5i—Co1—O6i | 89.38 (15) | C8—C7—H7 | 120.1 |
| O5—Co1—O6i | 90.62 (15) | C6—C7—H7 | 120.1 |
| O3i—Co1—O6 | 90.22 (11) | C7—C8—C14 | 121.2 (3) |
| O3—Co1—O6 | 89.78 (11) | C7—C8—H8 | 119.4 |
| O5i—Co1—O6 | 90.62 (15) | C14—C8—H8 | 119.4 |
| O5—Co1—O6 | 89.38 (15) | O1—C9—C12 | 119.7 (3) |
| O6i—Co1—O6 | 180.0 | O1—C9—C13 | 121.8 (3) |
| C15—O3—Co1 | 130.3 (2) | C12—C9—C13 | 118.4 (3) |
| Co1—O5—H5A | 126 (4) | O2—C10—C11 | 120.9 (3) |
| Co1—O5—H5B | 131 (4) | O2—C10—C14 | 120.3 (3) |
| H5A—O5—H5B | 103 (4) | C11—C10—C14 | 118.7 (3) |
| Co1—O6—H6A | 112 (4) | C1—C11—C12 | 119.4 (3) |
| Co1—O6—H6B | 98 (4) | C1—C11—C10 | 121.7 (3) |
| H6A—O6—H6B | 96 (4) | C12—C11—C10 | 118.9 (3) |
| H7A—O7—H7B | 110 (5) | C4—C12—C11 | 120.0 (3) |
| C2—C1—C11 | 119.5 (3) | C4—C12—C9 | 117.6 (3) |
| C2—C1—C15 | 116.7 (3) | C11—C12—C9 | 122.4 (3) |
| C11—C1—C15 | 123.8 (3) | C5—C13—C14 | 118.0 (3) |
| C1—C2—C3 | 120.6 (4) | C5—C13—C9 | 123.2 (3) |
| C1—C2—H2 | 119.7 | C14—C13—C9 | 118.8 (3) |
| C3—C2—H2 | 119.7 | C8—C14—C13 | 120.1 (3) |
| C4—C3—C2 | 120.2 (4) | C8—C14—C10 | 117.9 (3) |
| C4—C3—H3 | 119.9 | C13—C14—C10 | 122.1 (3) |
| C2—C3—H3 | 119.9 | O4—C15—O3 | 126.6 (3) |
| C3—C4—C12 | 120.3 (3) | O4—C15—C1 | 117.3 (3) |
| C3—C4—H4 | 119.8 | O3—C15—C1 | 115.9 (3) |
| O3i—Co1—O3—C15 | −8 (100) | C13—C9—C12—C4 | 170.7 (3) |
| O5i—Co1—O3—C15 | 115.4 (3) | O1—C9—C12—C11 | 169.1 (3) |
| O5—Co1—O3—C15 | −64.6 (3) | C13—C9—C12—C11 | −9.3 (5) |
| O6i—Co1—O3—C15 | −155.2 (3) | C6—C5—C13—C14 | −0.3 (5) |
| O6—Co1—O3—C15 | 24.8 (3) | Cl1—C5—C13—C14 | 180.0 (2) |
| C11—C1—C2—C3 | 0.3 (6) | C6—C5—C13—C9 | 178.8 (3) |
| C15—C1—C2—C3 | −178.1 (4) | Cl1—C5—C13—C9 | −0.9 (5) |
| C1—C2—C3—C4 | 0.5 (7) | O1—C9—C13—C5 | 8.6 (5) |
| C2—C3—C4—C12 | 0.5 (6) | C12—C9—C13—C5 | −173.1 (3) |
| C13—C5—C6—C7 | −1.1 (6) | O1—C9—C13—C14 | −172.2 (3) |
| Cl1—C5—C6—C7 | 178.6 (3) | C12—C9—C13—C14 | 6.1 (5) |
| C5—C6—C7—C8 | 2.1 (6) | C7—C8—C14—C13 | 0.3 (6) |
| C6—C7—C8—C14 | −1.7 (6) | C7—C8—C14—C10 | −179.3 (3) |
| C2—C1—C11—C12 | −2.1 (5) | C5—C13—C14—C8 | 0.8 (5) |
| C15—C1—C11—C12 | 176.1 (3) | C9—C13—C14—C8 | −178.5 (3) |
| C2—C1—C11—C10 | 176.2 (3) | C5—C13—C14—C10 | −179.7 (3) |
| C15—C1—C11—C10 | −5.6 (5) | C9—C13—C14—C10 | 1.1 (5) |
| O2—C10—C11—C1 | 1.2 (5) | O2—C10—C14—C8 | −3.0 (5) |
| C14—C10—C11—C1 | −175.8 (3) | C11—C10—C14—C8 | 174.0 (3) |
| O2—C10—C11—C12 | 179.5 (3) | O2—C10—C14—C13 | 177.4 (3) |
| C14—C10—C11—C12 | 2.5 (5) | C11—C10—C14—C13 | −5.6 (5) |
| C3—C4—C12—C11 | −2.4 (6) | Co1—O3—C15—O4 | −20.4 (6) |
| C3—C4—C12—C9 | 177.6 (4) | Co1—O3—C15—C1 | 165.0 (2) |
| C1—C11—C12—C4 | 3.2 (5) | C2—C1—C15—O4 | −80.0 (5) |
| C10—C11—C12—C4 | −175.2 (3) | C11—C1—C15—O4 | 101.7 (4) |
| C1—C11—C12—C9 | −176.8 (3) | C2—C1—C15—O3 | 95.1 (4) |
| C10—C11—C12—C9 | 4.8 (5) | C11—C1—C15—O3 | −83.2 (4) |
| O1—C9—C12—C4 | −11.0 (5) |
| H··· | ||||
| O7—H7 | 0.80 (4) | 2.37 (5) | 3.121 (5) | 157 (8) |
| O7—H7 | 0.82 (3) | 2.24 (4) | 3.049 (4) | 169 (8) |
| O6—H6 | 0.82 (3) | 1.92 (3) | 2.717 (4) | 164 (5) |
| O6—H6 | 0.82 (3) | 2.17 (4) | 2.916 (4) | 152 (6) |
| O5—H5 | 0.78 (3) | 2.08 (4) | 2.821 (4) | 159 (5) |
| O5—H5 | 0.81 (3) | 2.22 (4) | 2.932 (4) | 147 (5) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O7—H7 | 0.80 (4) | 2.37 (5) | 3.121 (5) | 157 (8) |
| O7—H7 | 0.82 (3) | 2.24 (4) | 3.049 (4) | 169 (8) |
| O6—H6 | 0.82 (3) | 1.92 (3) | 2.717 (4) | 164 (5) |
| O6—H6 | 0.82 (3) | 2.17 (4) | 2.916 (4) | 152 (6) |
| O5—H5 | 0.78 (3) | 2.08 (4) | 2.821 (4) | 159 (5) |
| O5—H5 | 0.81 (3) | 2.22 (4) | 2.932 (4) | 147 (5) |
Symmetry codes: (i) ; (ii) ; (iii) .