| Literature DB >> 25479944 |
Anna Kopf1, Ivaylo Kostadinov2, Antje Wichels3, Christian Quast4, Frank Oliver Glöckner5.
Abstract
Marine metatranscriptome data was generated as part of a study investigating the bacterioplankton communities towards the end of a diatom-dominated spring phytoplankton bloom. This genomic resource article reports a metatranscriptomic dataset from amidst the winter time prior to the occurrence of the spring diatom bloom. Up to 58% of all sequences could be assigned to predicted genes. Taxonomic analysis based on expressed 16S ribosomal RNA genes identified Alphaproteobacteria and Gammaproteobacteria as the most active community members.Entities:
Keywords: Bacterioplankton; CAZymes; Membrane transporter; Metatranscriptomics; Proteorhodopsin; TonB
Mesh:
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Year: 2014 PMID: 25479944 DOI: 10.1016/j.margen.2014.11.001
Source DB: PubMed Journal: Mar Genomics ISSN: 1874-7787 Impact factor: 1.710