Literature DB >> 25475352

Quantification and classification of neuronal responses in kernel-smoothed peristimulus time histograms.

Michael R H Hill1, Itzhak Fried2, Christof Koch3.   

Abstract

Peristimulus time histograms are a widespread form of visualizing neuronal responses. Kernel convolution methods transform these histograms into a smooth, continuous probability density function. This provides an improved estimate of a neuron's actual response envelope. We here develop a classifier, called the h-coefficient, to determine whether time-locked fluctuations in the firing rate of a neuron should be classified as a response or as random noise. Unlike previous approaches, the h-coefficient takes advantage of the more precise response envelope estimation provided by the kernel convolution method. The h-coefficient quantizes the smoothed response envelope and calculates the probability of a response of a given shape to occur by chance. We tested the efficacy of the h-coefficient in a large data set of Monte Carlo simulated smoothed peristimulus time histograms with varying response amplitudes, response durations, trial numbers, and baseline firing rates. Across all these conditions, the h-coefficient significantly outperformed more classical classifiers, with a mean false alarm rate of 0.004 and a mean hit rate of 0.494. We also tested the h-coefficient's performance in a set of neuronal responses recorded in humans. The algorithm behind the h-coefficient provides various opportunities for further adaptation and the flexibility to target specific parameters in a given data set. Our findings confirm that the h-coefficient can provide a conservative and powerful tool for the analysis of peristimulus time histograms with great potential for future development.
Copyright © 2015 the American Physiological Society.

Entities:  

Keywords:  action potentials; firing rate; human data; kernel convolution; peristimulus time histogram; signal detection; spike trains

Mesh:

Year:  2014        PMID: 25475352      PMCID: PMC4422346          DOI: 10.1152/jn.00595.2014

Source DB:  PubMed          Journal:  J Neurophysiol        ISSN: 0022-3077            Impact factor:   2.714


  32 in total

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Authors:  M Falzett; R K Moore; H M Petry; M K Powers
Journal:  Brain Res       Date:  1985-11-11       Impact factor: 3.252

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Journal:  Electroencephalogr Clin Neurophysiol       Date:  1978-08

10.  The statistical significance of the peristimulus time histogram (PSTH).

Authors:  G H Dörrscheidt
Journal:  Brain Res       Date:  1981-09-14       Impact factor: 3.252

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