Literature DB >> 25466310

Understanding the structural dynamics of TCR-pMHC complex interactions.

Itamar Kass1, Ashley M Buckle2, Natalie A Borg3.   

Abstract

Dynamics plays an important but underappreciated role in the interaction between the T cell receptor (TCR) and peptide-bound major histocompatibility complex (pMHC). Crystallographic studies have provided key molecular insights into this interaction; however, due to inherent features of the structural approach, the image of TCR-pMHC interactions that has emerged is a static one. In this review, we discuss how molecular dynamics (MD) simulations can complement and extend current experimental methods aimed at examining TCR-pMHC dynamics. We review the insights obtained from studies that leverage MD approaches, and propose that an integrative strategy that harnesses both MD simulations and structural and biophysical methods will provide new inroads into understanding the transitory and dynamic molecular events that dictate TCR signaling and T cell activation.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Keywords:  TCR–pMHC interactions; conformational flexibility; molecular dynamics

Year:  2014        PMID: 25466310     DOI: 10.1016/j.it.2014.10.005

Source DB:  PubMed          Journal:  Trends Immunol        ISSN: 1471-4906            Impact factor:   16.687


  20 in total

1.  How structural adaptability exists alongside HLA-A2 bias in the human αβ TCR repertoire.

Authors:  Sydney J Blevins; Brian G Pierce; Nishant K Singh; Timothy P Riley; Yuan Wang; Timothy T Spear; Michael I Nishimura; Zhiping Weng; Brian M Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-16       Impact factor: 11.205

2.  Identification of the cognate peptide-MHC target of T cell receptors using molecular modeling and force field scoring.

Authors:  Esteban Lanzarotti; Paolo Marcatili; Morten Nielsen
Journal:  Mol Immunol       Date:  2017-12-27       Impact factor: 4.407

3.  Citizens unite for computational immunology!

Authors:  Orrin S Belden; Sarah Catherine Baker; Brian M Baker
Journal:  Trends Immunol       Date:  2015-07       Impact factor: 16.687

4.  Structural insights into engineering a T-cell receptor targeting MAGE-A10 with higher affinity and specificity for cancer immunotherapy.

Authors:  Philip C Simister; Ellen C Border; João F Vieira; Nicholas J Pumphrey
Journal:  J Immunother Cancer       Date:  2022-07       Impact factor: 12.469

5.  Structural Model of the Extracellular Assembly of the TCR-CD3 Complex.

Authors:  Aswin Natarajan; Vidushan Nadarajah; Klara Felsovalyi; Wenjuan Wang; Vivian R Jeyachandran; Riley A Wasson; Timothy Cardozo; Clay Bracken; Michelle Krogsgaard
Journal:  Cell Rep       Date:  2016-03-17       Impact factor: 9.423

6.  Novel Concepts for Drug Hypersensitivity Based on the Use of Long-Time Scale Molecular Dynamic Simulation.

Authors:  Takahiro Murai; Norihito Kawashita; Yu-Shi Tian; Tatsuya Takagi
Journal:  J Pharm (Cairo)       Date:  2016-11-23

7.  Core Fucosylation of the T Cell Receptor Is Required for T Cell Activation.

Authors:  Wei Liang; Shanshan Mao; Shijie Sun; Ming Li; Zhi Li; Rui Yu; Tonghui Ma; Jianguo Gu; Jianing Zhang; Naoyuki Taniguchi; Wenzhe Li
Journal:  Front Immunol       Date:  2018-01-29       Impact factor: 7.561

8.  Structure and dynamics of major histocompatibility class Ib molecule H2-M3 complexed with mitochondrial-derived peptides.

Authors:  Arne Strand; San-Tai Shen; Diana R Tomchick; Junmei Wang; Chyung-Ru Wang; Johann Deisenhofer
Journal:  J Biomol Struct Dyn       Date:  2021-06-28

Review 9.  CAR-T cells: Early successes in blood cancer and challenges in solid tumors.

Authors:  Hassan Dana; Ghanbar Mahmoodi Chalbatani; Seyed Amir Jalali; Hamid Reza Mirzaei; Stephan A Grupp; Eloah Rabello Suarez; Catarina Rapôso; Thomas J Webster
Journal:  Acta Pharm Sin B       Date:  2020-11-02       Impact factor: 11.413

10.  Differential utilization of binding loop flexibility in T cell receptor ligand selection and cross-reactivity.

Authors:  Cory M Ayres; Daniel R Scott; Steven A Corcelli; Brian M Baker
Journal:  Sci Rep       Date:  2016-04-27       Impact factor: 4.379

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