Literature DB >> 25465723

Differential proteome analysis of the cell differentiation regulated by BCC, CRH, CXCR4, GnRH, GPCR, IL1 signaling pathways in Chinese fire-bellied newt limb regeneration.

Xiaofang Geng1, Tiantian Xu2, Zhipeng Niu2, Xiaochun Zhou2, Lijun Zhao3, Zhaohui Xie4, Deming Xue5, Fuchun Zhang6, Cunshuan Xu7.   

Abstract

Following amputation, the newt has the remarkable ability to regenerate its limb, and this process involves dedifferentiation, proliferation and differentiation. To investigate the potential proteome during a dynamic network of Chinese fire-bellied newt limb regeneration (CNLR), two-dimensional fluorescence difference gel electrophoresis (2D-DIGE) and mass spectrum (MS) were applied to examine changes in the proteome that occurred at 11 time points after amputation. Meanwhile, several proteins were selected to validate their expression levels by Western blot. The results revealed that 1476 proteins had significantly changed as compared to the control group. Gene Ontology annotation and protein network analysis by Ingenuity Pathway Analysis 9.0 (IPA) software suggested that the differentially expressed proteins were involved in 33 kinds of physiological activities including signal transduction, cell proliferation, cell differentiation, etc. Among these proteins, 407 proteins participated in cell differentiation with 212 proteins in the differentiation of skin cell, myocyte, neurocyte, chondrocyte and osteocyte, and 37 proteins participated in signaling pathways of BCC, CRH, CXCR4, GnRH, GPCR and IL1 which regulated cell differentiation and redifferentiation. On the other hand, the signal transduction activity and cell differentiation activity were analyzed by IPA based on the changes in the expression of these proteins. The results showed that BCC, CRH, CXCR4, GnRH, GPCR and IL1 signaling pathways played an important role in regulating the differentiation of skin cell, myocyte, neurocyte, chondrocyte and osteocyte during CNLR.
Copyright © 2014 International Society of Differentiation. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Cell differentiation; Chinese fire-bellied newt; Limb regeneration; Network analysis; Signal transduction

Mesh:

Substances:

Year:  2014        PMID: 25465723     DOI: 10.1016/j.diff.2014.10.002

Source DB:  PubMed          Journal:  Differentiation        ISSN: 0301-4681            Impact factor:   3.880


  5 in total

1.  iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians.

Authors:  Xiaofang Geng; Gaiping Wang; Yanli Qin; Xiayan Zang; Pengfei Li; Zhi Geng; Deming Xue; Zimei Dong; Kexue Ma; Guangwen Chen; Cunshuan Xu
Journal:  PLoS One       Date:  2015-07-01       Impact factor: 3.240

2.  Expressions Profiles of the Proteins Associated with Carbohydrate Metabolism in Rat Liver Regeneration.

Authors:  Li Yin; Cuifang Chang; Cunshuan Xu
Journal:  Biomed Res Int       Date:  2017-07-02       Impact factor: 3.411

3.  ITRAQ-based quantitative proteomic analysis of Cynops orientalis limb regeneration.

Authors:  Jie Tang; Yuan Yu; Hanxue Zheng; Lu Yin; Mei Sun; Wenjun Wang; Jihong Cui; Wenguang Liu; Xin Xie; Fulin Chen
Journal:  BMC Genomics       Date:  2017-09-22       Impact factor: 3.969

4.  Data from proteomic analysis of the skin of Chinese giant salamander (Andrias davidianus).

Authors:  Xiaofang Geng; Hong Wei; Haitao Shang; Minghui Zhou; Bing Chen; Fuchun Zhang; Xiayan Zang; Pengfei Li; Jingyan Sun; Jing Che; Yaping Zhang; Cunshuan Xu
Journal:  Data Brief       Date:  2015-02-26

5.  Proteomic analysis of eleven tissues in the Chinese giant salamander (Andrias davidianus).

Authors:  Xiaofang Geng; Jianlin Guo; Xiayan Zang; Cuifang Chang; Haitao Shang; Hong Wei; Cunshuan Xu
Journal:  Sci Rep       Date:  2019-11-11       Impact factor: 4.379

  5 in total

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