Literature DB >> 25461971

Expression, purification and reconstitution of the C-terminal transmembrane domain of scavenger receptor BI into detergent micelles for NMR analysis.

Alexandra C Chadwick1, Davin R Jensen1, Francis C Peterson1, Brian F Volkman2, Daisy Sahoo3.   

Abstract

Scavenger receptor class B type I (SR-BI), the high density lipoprotein (HDL) receptor, is important for the delivery of HDL-cholesteryl esters to the liver for excretion via bile formation. The focus on therapeutic strategies aimed at reducing cholesterol levels highlights the critical need to understand the structural features of SR-BI that drive cholesterol removal. Yet, in the absence of a high-resolution structure of SR-BI, our understanding of how SR-BI interacts with HDL is limited. In this study, we have optimized the NMR solution conditions for the structural analysis of the C-terminal transmembrane domain of SR-BI that harbors putative domains required for receptor oligomerization. An isotopically-labeled SR-BI peptide encompassing residues 405-475 was bacterially-expressed and purified. [U-(15)N]-SR-BI(405-475) was incorporated into different detergent micelles and assessed by (1)H-(15)N-HSQC in order to determine which detergent micelle best maintained SR-BI(405-475) in a folded, native conformation for subsequent NMR analyses. We also determined the optimal detergent concentration used in micelles, as well as temperature, solution buffer and pH conditions. Based on (1)H-(15)N-HSQC peak dispersion, intensity, and uniformity, we determined that [U-(15)N]-SR-BI(405-475) should be incorporated into 5% detergent micelles consisting of 1-palmitoyl-2-hydroxy-sn-glycero-3-phospho-[1'-rac-glycerol] (LPPG) and data collected at 40°C in a non-buffered solution at pH 6.8. Furthermore, we demonstrate the ability of SR-BI(405-475) to form dimers upon chemical crosslinking. These studies represent the first steps in obtaining high-resolution structural information by NMR for the HDL receptor that plays a critical role in regulating whole body cholesterol removal.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Detergent; Expression; HDL; Micelles; NMR; Purification; SR-BI; Transmembrane

Mesh:

Substances:

Year:  2014        PMID: 25461971      PMCID: PMC4270826          DOI: 10.1016/j.pep.2014.11.001

Source DB:  PubMed          Journal:  Protein Expr Purif        ISSN: 1046-5928            Impact factor:   1.650


  53 in total

1.  Scavenger receptor class B, type I (SR-BI) homo-dimerizes via its C-terminal region: fluorescence resonance energy transfer analysis.

Authors:  Daisy Sahoo; Yinan Peng; Jeffery R Smith; Yolanda F Darlington; Margery A Connelly
Journal:  Biochim Biophys Acta       Date:  2007-05-18

2.  The program XEASY for computer-supported NMR spectral analysis of biological macromolecules.

Authors:  C Bartels; T H Xia; M Billeter; P Güntert; K Wüthrich
Journal:  J Biomol NMR       Date:  1995-07       Impact factor: 2.835

3.  Regulation of scavenger receptor, class B, type I, a high density lipoprotein receptor, in liver and steroidogenic tissues of the rat.

Authors:  K T Landschulz; R K Pathak; A Rigotti; M Krieger; H H Hobbs
Journal:  J Clin Invest       Date:  1996-08-15       Impact factor: 14.808

4.  Modeling alpha-helical transmembrane domains: the calculation and use of substitution tables for lipid-facing residues.

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Journal:  Protein Sci       Date:  1993-01       Impact factor: 6.725

5.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

6.  A simple method for displaying the hydropathic character of a protein.

Authors:  J Kyte; R F Doolittle
Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

7.  Identification of the N-linked glycosylation sites on the high density lipoprotein (HDL) receptor SR-BI and assessment of their effects on HDL binding and selective lipid uptake.

Authors:  Marisa Viñals; Shangzhe Xu; Eliza Vasile; Monty Krieger
Journal:  J Biol Chem       Date:  2002-11-11       Impact factor: 5.157

8.  A targeted mutation in the murine gene encoding the high density lipoprotein (HDL) receptor scavenger receptor class B type I reveals its key role in HDL metabolism.

Authors:  A Rigotti; B L Trigatti; M Penman; H Rayburn; J Herz; M Krieger
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

9.  Lower plasma levels and accelerated clearance of high density lipoprotein (HDL) and non-HDL cholesterol in scavenger receptor class B type I transgenic mice.

Authors:  Y Ueda; L Royer; E Gong; J Zhang; P N Cooper; O Francone; E M Rubin
Journal:  J Biol Chem       Date:  1999-03-12       Impact factor: 5.157

10.  The efficient cellular uptake of high density lipoprotein lipids via scavenger receptor class B type I requires not only receptor-mediated surface binding but also receptor-specific lipid transfer mediated by its extracellular domain.

Authors:  X Gu; B Trigatti; S Xu; S Acton; J Babitt; M Krieger
Journal:  J Biol Chem       Date:  1998-10-09       Impact factor: 5.157

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  6 in total

1.  NMR Structure of the C-Terminal Transmembrane Domain of the HDL Receptor, SR-BI, and a Functionally Relevant Leucine Zipper Motif.

Authors:  Alexandra C Chadwick; Davin R Jensen; Paul J Hanson; Philip T Lange; Sarah C Proudfoot; Francis C Peterson; Brian F Volkman; Daisy Sahoo
Journal:  Structure       Date:  2017-02-02       Impact factor: 5.006

Review 2.  Scavenger receptor B type 1: expression, molecular regulation, and cholesterol transport function.

Authors:  Wen-Jun Shen; Shailendra Asthana; Fredric B Kraemer; Salman Azhar
Journal:  J Lipid Res       Date:  2018-05-02       Impact factor: 5.922

Review 3.  What does procollagen C-endopeptidase enhancer protein 2 have to do with HDL-cholesteryl ester uptake? Or how I learned to stop worrying and love reverse cholesterol transport?

Authors:  Mary G Sorci-Thomas; Ricquita D Pollard; Michael J Thomas
Journal:  Curr Opin Lipidol       Date:  2015-10       Impact factor: 4.776

Review 4.  Importance of Apolipoprotein A-I in Multiple Sclerosis.

Authors:  Lidia A Gardner; Michael C Levin
Journal:  Front Pharmacol       Date:  2015-11-20       Impact factor: 5.810

5.  Proline residues in scavenger receptor-BI's C-terminal region support efficient cholesterol transport.

Authors:  Sarah C Proudfoot; Daisy Sahoo
Journal:  Biochem J       Date:  2019-03-22       Impact factor: 3.857

Review 6.  SR-B1's Next Top Model: Structural Perspectives on the Functions of the HDL Receptor.

Authors:  Hayley R Powers; Daisy Sahoo
Journal:  Curr Atheroscler Rep       Date:  2022-02-02       Impact factor: 5.967

  6 in total

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