Literature DB >> 25461725

Protein amino-terminal modifications and proteomic approaches for N-terminal profiling.

Zon W Lai1, Agnese Petrera2, Oliver Schilling3.   

Abstract

Amino-/N-terminal processing is a crucial post-translational modification affecting almost all proteins. In addition to altering the chemical properties of the N-terminus, these modifications affect protein activation, conversion, and degradation, which subsequently lead to diversified biological functions. The study of N-terminal modifications is of increasing interest; especially since modifications such as proteolytic truncation or pyroglutamate formation have been linked to disease processes. During the past decade, mass spectrometry has played an important role in facilitating the investigation of N-terminal modifications. Continuous progress is being made in the development and application of robust methods for the dedicated analysis of native and modified protein N-termini in a proteome-wide manner. Here we highlight recent progress in our understanding of protein N-terminal biology as well as outlining present enrichment strategies for mass spectrometry-based studies of protein N-termini.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 25461725     DOI: 10.1016/j.cbpa.2014.10.026

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  11 in total

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2.  Formalin-Fixed, Paraffin-Embedded Tissues (FFPE) as a Robust Source for the Profiling of Native and Protease-Generated Protein Amino Termini.

Authors:  Zon Weng Lai; Juliane Weisser; Lars Nilse; Fabrizio Costa; Eva Keller; Martina Tholen; Jayachandran N Kizhakkedathu; Martin Biniossek; Peter Bronsert; Oliver Schilling
Journal:  Mol Cell Proteomics       Date:  2016-04-17       Impact factor: 5.911

3.  Fibroblast activation protein-α, a stromal cell surface protease, shapes key features of cancer associated fibroblasts through proteome and degradome alterations.

Authors:  M M Koczorowska; S Tholen; F Bucher; L Lutz; J N Kizhakkedathu; O De Wever; U F Wellner; M L Biniossek; A Stahl; S Lassmann; O Schilling
Journal:  Mol Oncol       Date:  2015-08-11       Impact factor: 6.603

4.  Quantitative N-Terminal Footprinting of Pathogenic Mycobacteria Reveals Differential Protein Acetylation.

Authors:  Cristal Reyna Thompson; Matthew M Champion; Patricia A Champion
Journal:  J Proteome Res       Date:  2018-08-16       Impact factor: 4.466

Review 5.  Strategies for Development of a Next-Generation Protein Sequencing Platform.

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6.  Direct N-alkylation of unprotected amino acids with alcohols.

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Review 7.  Molecular stratification of idiopathic nephrotic syndrome.

Authors:  Moin A Saleem
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8.  TAILS N-terminomic and proteomic datasets of healthy human dental pulp.

Authors:  Ulrich Eckhard; Giada Marino; Simon R Abbey; Ian Matthew; Christopher M Overall
Journal:  Data Brief       Date:  2015-10-16

9.  Peptidase specificity from the substrate cleavage collection in the MEROPS database and a tool to measure cleavage site conservation.

Authors:  Neil D Rawlings
Journal:  Biochimie       Date:  2015-10-21       Impact factor: 4.079

Review 10.  Determinants of Macromolecular Specificity from Proteomics-Derived Peptide Substrate Data.

Authors:  Julian E Fuchs; Oliver Schilling; Klaus R Liedl
Journal:  Curr Protein Pept Sci       Date:  2017       Impact factor: 3.272

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