Literature DB >> 25461724

15 years of zebrafish chemical screening.

Andrew J Rennekamp1, Randall T Peterson2.   

Abstract

In 2000, the first chemical screen using living zebrafish in a multi-well plate was reported. Since then, more than 60 additional screens have been published describing whole-organism drug and pathway discovery projects in zebrafish. To investigate the scope of the work reported in the last 14 years and to identify trends in the field, we analyzed the discovery strategies of 64 primary research articles from the literature. We found that zebrafish screens have expanded beyond the use of developmental phenotypes to include behavioral, cardiac, metabolic, proliferative and regenerative endpoints. Additionally, many creative strategies have been used to uncover the mechanisms of action of new small molecules including chemical phenocopy, genetic phenocopy, mutant rescue, and spatial localization strategies.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 25461724      PMCID: PMC4339096          DOI: 10.1016/j.cbpa.2014.10.025

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  75 in total

1.  A novel chemical screening strategy in zebrafish identifies common pathways in embryogenesis and rhabdomyosarcoma development.

Authors:  Xiuning Le; Emily K Pugach; Simone Hettmer; Narie Y Storer; Jianing Liu; Airon A Wills; Antony DiBiase; Eleanor Y Chen; Myron S Ignatius; Kenneth D Poss; Amy J Wagers; David M Langenau; Leonard I Zon
Journal:  Development       Date:  2013-04-24       Impact factor: 6.868

2.  Selective small molecule targeting β-catenin function discovered by in vivo chemical genetic screen.

Authors:  Jijun Hao; Ada Ao; Li Zhou; Clare K Murphy; Audrey Y Frist; Jessica J Keel; Curtis A Thorne; Kwangho Kim; Ethan Lee; Charles C Hong
Journal:  Cell Rep       Date:  2013-09-05       Impact factor: 9.423

3.  Identification of a new modulator of the intercalated disc in a zebrafish model of arrhythmogenic cardiomyopathy.

Authors:  Angeliki Asimaki; Sudhir Kapoor; Eva Plovie; Anne Karin Arndt; Edward Adams; ZhenZhen Liu; Cynthia A James; Daniel P Judge; Hugh Calkins; Jared Churko; Joseph C Wu; Calum A MacRae; André G Kléber; Jeffrey E Saffitz
Journal:  Sci Transl Med       Date:  2014-06-11       Impact factor: 17.956

4.  Inhibition of bone morphogenetic protein signaling attenuates anemia associated with inflammation.

Authors:  Andrea U Steinbicker; Chetana Sachidanandan; Ashley J Vonner; Rushdia Z Yusuf; Donna Y Deng; Carol S Lai; Kristen M Rauwerdink; Julia C Winn; Borja Saez; Colleen M Cook; Brian A Szekely; Cindy N Roy; Jasbir S Seehra; Gregory D Cuny; David T Scadden; Randall T Peterson; Kenneth D Bloch; Paul B Yu
Journal:  Blood       Date:  2011-03-10       Impact factor: 22.113

5.  Automated zebrafish chorion removal and single embryo placement: optimizing throughput of zebrafish developmental toxicity screens.

Authors:  David Mandrell; Lisa Truong; Caleb Jephson; Mushfiqur R Sarker; Aaron Moore; Christopher Lang; Michael T Simonich; Robert L Tanguay
Journal:  J Lab Autom       Date:  2012-02

6.  Transparent adult zebrafish as a tool for in vivo transplantation analysis.

Authors:  Richard Mark White; Anna Sessa; Christopher Burke; Teresa Bowman; Jocelyn LeBlanc; Craig Ceol; Caitlin Bourque; Michael Dovey; Wolfram Goessling; Caroline Erter Burns; Leonard I Zon
Journal:  Cell Stem Cell       Date:  2008-02-07       Impact factor: 24.633

7.  Multidimensional in vivo hazard assessment using zebrafish.

Authors:  Lisa Truong; David M Reif; Lindsey St Mary; Mitra C Geier; Hao D Truong; Robert L Tanguay
Journal:  Toxicol Sci       Date:  2013-10-17       Impact factor: 4.849

8.  Automated, quantitative screening assay for antiangiogenic compounds using transgenic zebrafish.

Authors:  T Cameron Tran; Blossom Sneed; Jamil Haider; Delali Blavo; Audrey White; Temitope Aiyejorun; Timothy C Baranowski; Amy L Rubinstein; Thanh N Doan; Raymond Dingledine; Eric M Sandberg
Journal:  Cancer Res       Date:  2007-12-01       Impact factor: 12.701

9.  Highly efficient generation of heritable zebrafish gene mutations using homo- and heterodimeric TALENs.

Authors:  Lindsay Cade; Deepak Reyon; Woong Y Hwang; Shengdar Q Tsai; Samir Patel; Cyd Khayter; J Keith Joung; Jeffry D Sander; Randall T Peterson; Jing-Ruey Joanna Yeh
Journal:  Nucleic Acids Res       Date:  2012-06-07       Impact factor: 16.971

10.  Drug screening in Scn1a zebrafish mutant identifies clemizole as a potential Dravet syndrome treatment.

Authors:  Scott C Baraban; Matthew T Dinday; Gabriela A Hortopan
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

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  99 in total

Review 1.  Parkinson's disease pathogenesis from the viewpoint of small fish models.

Authors:  Hideaki Matsui; Ryosuke Takahashi
Journal:  J Neural Transm (Vienna)       Date:  2017-08-02       Impact factor: 3.575

Review 2.  Zebrafish: an important tool for liver disease research.

Authors:  Wolfram Goessling; Kirsten C Sadler
Journal:  Gastroenterology       Date:  2015-08-28       Impact factor: 22.682

3.  Do Zebrafish Obey Lipinski Rules?

Authors:  Keith Long; Stephen J Kostman; Christian Fernandez; James C Burnett; Donna M Huryn
Journal:  ACS Med Chem Lett       Date:  2019-04-24       Impact factor: 4.345

Review 4.  New zebrafish models of neurodegeneration.

Authors:  Rebeca Martín-Jiménez; Michelangelo Campanella; Claire Russell
Journal:  Curr Neurol Neurosci Rep       Date:  2015-06       Impact factor: 5.081

5.  A high-throughput assay for quantifying appetite and digestive dynamics.

Authors:  Josua Jordi; Drago Guggiana-Nilo; Edward Soucy; Erin Yue Song; Caroline Lei Wee; Florian Engert
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2015-06-24       Impact factor: 3.619

Review 6.  Developing zebrafish disease models for in vivo small molecule screens.

Authors:  Pui-Ying Lam; Randall T Peterson
Journal:  Curr Opin Chem Biol       Date:  2019-03-28       Impact factor: 8.822

7.  Phenotypic Landscape of Schizophrenia-Associated Genes Defines Candidates and Their Shared Functions.

Authors:  Summer B Thyme; Lindsey M Pieper; Eric H Li; Shristi Pandey; Yiqun Wang; Nathan S Morris; Carrie Sha; Joo Won Choi; Kristian J Herrera; Edward R Soucy; Steve Zimmerman; Owen Randlett; Joel Greenwood; Steven A McCarroll; Alexander F Schier
Journal:  Cell       Date:  2019-03-28       Impact factor: 41.582

8.  In vitro and in vivo characterization of the anticancer activity of Thai stingless bee (Tetragonula laeviceps) cerumen.

Authors:  Pongvit Nugitrangson; Songchan Puthong; Tawin Iempridee; Wittaya Pimtong; Surachai Pornpakakul; Chanpen Chanchao
Journal:  Exp Biol Med (Maywood)       Date:  2015-08-19

9.  Anti-tuberculosis effect of isoniazid scales accurately from zebrafish to humans.

Authors:  Rob C van Wijk; Wanbin Hu; Sharka M Dijkema; Dirk-Jan van den Berg; Jeremy Liu; Rida Bahi; Fons J Verbeek; Ulrika S H Simonsson; Herman P Spaink; Piet H van der Graaf; Elke H J Krekels
Journal:  Br J Pharmacol       Date:  2020-11-03       Impact factor: 8.739

10.  Role of β-glucosidase 2 in aberrant glycosphingolipid metabolism: model of glucocerebrosidase deficiency in zebrafish.

Authors:  Lindsey T Lelieveld; Mina Mirzaian; Chi-Lin Kuo; Marta Artola; Maria J Ferraz; Remco E A Peter; Hisako Akiyama; Peter Greimel; Richard J B H N van den Berg; Herman S Overkleeft; Rolf G Boot; Annemarie H Meijer; Johannes M F G Aerts
Journal:  J Lipid Res       Date:  2019-09-27       Impact factor: 5.922

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