Literature DB >> 25460230

Formal revision of the Alexandrium tamarense species complex (Dinophyceae) taxonomy: the introduction of five species with emphasis on molecular-based (rDNA) classification.

Uwe John1, R Wayne Litaker2, Marina Montresor3, Shauna Murray4, Michael L Brosnahan5, Donald M Anderson5.   

Abstract

The Alexandrium tamarense species complex is one of the most studied marine dinoflagellate groups due to its ecological, toxicological and economic importance. Several members of this complex produce saxitoxin and its congeners - potent neurotoxins that cause paralytic shellfish poisoning. Isolates from this complex are assigned to A. tamarense, A. fundyense, or A. catenella based on two main morphological characters: the ability to form chains and the presence/absence of a ventral pore between Plates 1' and 4'. However, studies have shown that these characters are not consistent and/or distinctive. Further, phylogenies based on multiple regions in the rDNA operon indicate that the sequences from morphologically indistinguishable isolates partition into five clades. These clades were initially named based on their presumed geographic distribution, but recently were renamed as Groups I-V following the discovery of sympatry among some groups. In this study we present data on morphology, ITS/5.8S genetic distances, ITS2 compensatory base changes, mating incompatibilities, toxicity, the sxtA toxin synthesis gene, and rDNA phylogenies. All results were consistent with each group representing a distinct cryptic species. Accordingly, the groups were assigned species names as follows: Group I, A. fundyense; Group II, A. mediterraneum; Group III, A. tamarense; Group IV, A. pacificum; Group V, A. australiense.
Copyright © 2014 Elsevier GmbH. All rights reserved.

Entities:  

Keywords:  Alexandrium australiense.; Alexandrium fundyense; Alexandrium mediterraneum; Alexandrium pacificum; Alexandrium tamarense

Mesh:

Substances:

Year:  2014        PMID: 25460230      PMCID: PMC4457362          DOI: 10.1016/j.protis.2014.10.001

Source DB:  PubMed          Journal:  Protist        ISSN: 1434-4610


  29 in total

1.  Quantitative determination of paralytic shellfish poisoning toxins in shellfish by using prechromatographic oxidation and liquid chromatography with fluorescence detection.

Authors:  J F Lawrence; B Niedzwiadek
Journal:  J AOAC Int       Date:  2001 Jul-Aug       Impact factor: 1.913

2.  Genetic diversity and molecular detection of three toxic dinoflagellate genera (Alexandrium, Dinophysis, and Karenia) from French coasts.

Authors:  Laure Guillou; Elisabeth Nézan; Valérie Cueff; Evelyne Erard-Le Denn; Marie-Anne Cambon-Bonavita; Patrick Gentien; Georges Barbier
Journal:  Protist       Date:  2002-09

3.  Secondary structure models of the nuclear internal transcribed spacer regions and 5.8S rRNA in Calciodinelloideae (Peridiniaceae) and other dinoflagellates.

Authors:  Marc Gottschling; Jörg Plötner
Journal:  Nucleic Acids Res       Date:  2004-01-13       Impact factor: 16.971

4.  ITS2 is a double-edged tool for eukaryote evolutionary comparisons.

Authors:  Annette W Coleman
Journal:  Trends Genet       Date:  2003-07       Impact factor: 11.639

5.  RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees.

Authors:  A Stamatakis; T Ludwig; H Meier
Journal:  Bioinformatics       Date:  2004-12-17       Impact factor: 6.937

6.  Phylogeny of calcareous dinoflagellates as inferred from ITS and ribosomal sequence data.

Authors:  Marc Gottschling; Helmut Keupp; Jörg Plötner; Ronny Knop; Helmut Willems; Monika Kirsch
Journal:  Mol Phylogenet Evol       Date:  2005-09       Impact factor: 4.286

7.  The application of a molecular clock based on molecular sequences and the fossil record to explain biogeographic distributions within the Alexandrium tamarense "species complex" (Dinophyceae).

Authors:  Uwe John; Robert A Fensome; Linda K Medlin
Journal:  Mol Biol Evol       Date:  2003-04-25       Impact factor: 16.240

8.  Quantitative determination of paralytic shellfish poisoning toxins in shellfish using prechromatographic oxidation and liquid chromatography with fluorescence detection: interlaboratory study.

Authors:  James F Lawrence; Barbara Niedzwiadek; Cathie Menard
Journal:  J AOAC Int       Date:  2004 Jan-Feb       Impact factor: 1.913

9.  4SALE--a tool for synchronous RNA sequence and secondary structure alignment and editing.

Authors:  Philipp N Seibel; Tobias Müller; Thomas Dandekar; Jörg Schultz; Matthias Wolf
Journal:  BMC Bioinformatics       Date:  2006-11-13       Impact factor: 3.169

10.  MAFFT version 5: improvement in accuracy of multiple sequence alignment.

Authors:  Kazutaka Katoh; Kei-ichi Kuma; Hiroyuki Toh; Takashi Miyata
Journal:  Nucleic Acids Res       Date:  2005-01-20       Impact factor: 16.971

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  41 in total

1.  CHARACTERIZATION OF 17 NEW MICROSATELLITE MARKERS FOR THE DINOFLAGELLATE ALEXANDRIUM FUNDYENSE (DINOPHYCEAE), A HARMFUL ALGAL BLOOM SPECIES.

Authors:  Taylor Sehein; Mindy L Richlen; Satoshi Nagai; Motoshige Yasuike; Yoji Nakamura; Donald M Anderson
Journal:  J Appl Phycol       Date:  2015-09-25       Impact factor: 3.215

2.  Experimental exposure of the mussel Mytilus platensis (d'Orbigny, 1842) to the dinoflagellate Alexandrium catenella from Argentine Patagonia.

Authors:  Leilén L Gracia Villalobos; Jésica L Tobke; Nora G Montoya; Norma H Santinelli; Mónica N Gil
Journal:  Ecotoxicology       Date:  2020-02-06       Impact factor: 2.823

3.  Trait changes induced by species interactions in two phenotypically distinct strains of a marine dinoflagellate.

Authors:  Sylke Wohlrab; Urban Tillmann; Allan Cembella; Uwe John
Journal:  ISME J       Date:  2016-04-19       Impact factor: 10.302

4.  Factors regulating excystment of Alexandrium in Puget Sound, WA, USA.

Authors:  Stephanie K Moore; Brian D Bill; Levi R Hay; Jennifer Emenegger; Kiara C Eldred; Cheryl L Greengrove; Julie E Masura; Donald M Anderson
Journal:  Harmful Algae       Date:  2015-03       Impact factor: 4.273

Review 5.  Cyst-forming dinoflagellates in a warming climate.

Authors:  Michael L Brosnahan; Alexis D Fischer; Cary B Lopez; Stephanie K Moore; Donald M Anderson
Journal:  Harmful Algae       Date:  2019-12-20       Impact factor: 4.273

6.  Intraspecific facilitation by allelochemical mediated grazing protection within a toxigenic dinoflagellate population.

Authors:  Uwe John; Urban Tillmann; Jennifer Hülskötter; Tilman J Alpermann; Sylke Wohlrab; Dedmer B Van de Waal
Journal:  Proc Biol Sci       Date:  2015-01-07       Impact factor: 5.349

7.  Distribution of Alexandrium fundyense (Dinophyceae) cysts in Greenland and Iceland, with an emphasis on viability and growth in the Arctic.

Authors:  Mindy L Richlen; Oliver Zielinski; Lars Holinde; Urban Tillmann; Allan Cembella; Yihua Lyu; Donald M Anderson
Journal:  Mar Ecol Prog Ser       Date:  2016-04-07       Impact factor: 2.824

8.  Spatial distribution and multiannual trends of potentially toxic microalgae in shellfish farms along the Sardinian coast (NW Mediterranean Sea).

Authors:  Anna Maria Bazzoni; Tiziana Caddeo; Silvia Pulina; Bachisio M Padedda; Cecilia T Satta; Nicola Sechi; Antonella Lugliè
Journal:  Environ Monit Assess       Date:  2015-02-06       Impact factor: 2.513

9.  Ocean warming since 1982 has expanded the niche of toxic algal blooms in the North Atlantic and North Pacific oceans.

Authors:  Christopher J Gobler; Owen M Doherty; Theresa K Hattenrath-Lehmann; Andrew W Griffith; Yoonja Kang; R Wayne Litaker
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-24       Impact factor: 11.205

10.  High Specificity of a Quantitative PCR Assay Targeting a Saxitoxin Gene for Monitoring Toxic Algae Associated with Paralytic Shellfish Toxins in the Yellow Sea.

Authors:  Yan Gao; Ren-Cheng Yu; Shauna A Murray; Jian-Hua Chen; Zhen-Jun Kang; Qing-Chun Zhang; Fan-Zhou Kong; Ming-Jiang Zhou
Journal:  Appl Environ Microbiol       Date:  2015-07-31       Impact factor: 4.792

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