Literature DB >> 25456412

Molecular basis for DPY-30 association to COMPASS-like and NURF complexes.

Véronique Tremblay1, Pamela Zhang1, Chandra-Prakash Chaturvedi2, Janet Thornton3, Joseph S Brunzelle4, Georgios Skiniotis5, Ali Shilatifard3, Marjorie Brand2, Jean-François Couture6.   

Abstract

DPY-30 is a subunit of mammalian COMPASS-like complexes (complex of proteins associated with Set1) and regulates global histone H3 Lys-4 trimethylation. Here we report structural evidence showing that the incorporation of DPY-30 into COMPASS-like complexes is mediated by several hydrophobic interactions between an amphipathic α helix located on the C terminus of COMPASS subunit ASH2L and the inner surface of the DPY-30 dimerization/docking (D/D) module. Mutations impairing the interaction between ASH2L and DPY-30 result in a loss of histone H3K4me3 at the β locus control region and cause a delay in erythroid cell terminal differentiation. Using overlay assays, we defined a consensus sequence for DPY-30 binding proteins and found that DPY-30 interacts with BAP18, a subunit of the nucleosome remodeling factor complex. Overall, our results indicate that the ASH2L/DPY-30 complex is important for cell differentiation and provide insights into the ability of DPY-30 to associate with functionally divergent multisubunit complexes.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 25456412      PMCID: PMC5832440          DOI: 10.1016/j.str.2014.10.002

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  45 in total

1.  Structure of the SPRY domain of human Ash2L and its interactions with RbBP5 and DPY30.

Authors:  Yong Chen; Fang Cao; Bingbing Wan; Yali Dou; Ming Lei
Journal:  Cell Res       Date:  2012-01-10       Impact factor: 25.617

Review 2.  Epigenetics: a landscape takes shape.

Authors:  Aaron D Goldberg; C David Allis; Emily Bernstein
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

3.  Distinct interaction modes of an AKAP bound to two regulatory subunit isoforms of protein kinase A revealed by amide hydrogen/deuterium exchange.

Authors:  Lora L Burns-Hamuro; Yoshitomo Hamuro; Jack S Kim; Paul Sigala; Rosa Fayos; David D Stranz; Patricia A Jennings; Susan S Taylor; Virgil L Woods
Journal:  Protein Sci       Date:  2005-10-31       Impact factor: 6.725

4.  Characterization of a novel WDR5-binding site that recruits RbBP5 through a conserved motif to enhance methylation of histone H3 lysine 4 by mixed lineage leukemia protein-1.

Authors:  Zain Odho; Stacey M Southall; Jon R Wilson
Journal:  J Biol Chem       Date:  2010-08-17       Impact factor: 5.157

5.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

6.  Quantitative dissection and stoichiometry determination of the human SET1/MLL histone methyltransferase complexes.

Authors:  Rick van Nuland; Arne H Smits; Paschalina Pallaki; Pascal W T C Jansen; Michiel Vermeulen; H T Marc Timmers
Journal:  Mol Cell Biol       Date:  2013-03-18       Impact factor: 4.272

7.  New and continuing developments at PROSITE.

Authors:  Christian J A Sigrist; Edouard de Castro; Lorenzo Cerutti; Béatrice A Cuche; Nicolas Hulo; Alan Bridge; Lydie Bougueleret; Ioannis Xenarios
Journal:  Nucleic Acids Res       Date:  2012-11-17       Impact factor: 16.971

8.  The plasticity of WDR5 peptide-binding cleft enables the binding of the SET1 family of histone methyltransferases.

Authors:  Pamela Zhang; Hwabin Lee; Joseph S Brunzelle; Jean-Francois Couture
Journal:  Nucleic Acids Res       Date:  2012-01-20       Impact factor: 16.971

9.  Crystal structure of the trithorax group protein ASH2L reveals a forkhead-like DNA binding domain.

Authors:  Sabina Sarvan; Vanja Avdic; Véronique Tremblay; Chandra-Prakash Chaturvedi; Pamela Zhang; Sylvain Lanouette; Alexandre Blais; Joseph S Brunzelle; Marjorie Brand; Jean-François Couture
Journal:  Nat Struct Mol Biol       Date:  2011-06-05       Impact factor: 15.369

10.  USF1 and hSET1A mediated epigenetic modifications regulate lineage differentiation and HoxB4 transcription.

Authors:  Changwang Deng; Ying Li; Shermi Liang; Kairong Cui; Tal Salz; Hui Yang; Zhanyun Tang; Patrick G Gallagher; Yi Qiu; Robert Roeder; Keji Zhao; Jörg Bungert; Suming Huang
Journal:  PLoS Genet       Date:  2013-06-06       Impact factor: 5.917

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  19 in total

1.  Hijacking a key chromatin modulator creates epigenetic vulnerability for MYC-driven cancer.

Authors:  Zhenhua Yang; Kushani Shah; Theodore Busby; Keith Giles; Alireza Khodadadi-Jamayran; Wei Li; Hao Jiang
Journal:  J Clin Invest       Date:  2018-07-23       Impact factor: 14.808

Review 2.  The complex activities of the SET1/MLL complex core subunits in development and disease.

Authors:  Hao Jiang
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2020-04-15       Impact factor: 4.490

3.  Specific inhibition of DPY30 activity by ASH2L-derived peptides suppresses blood cancer cell growth.

Authors:  Kushani K Shah; Robert H Whitaker; Theodore Busby; Jing Hu; Bi Shi; Zhenjia Wang; Chongzhi Zang; William J Placzek; Hao Jiang
Journal:  Exp Cell Res       Date:  2019-06-26       Impact factor: 3.905

4.  Mechanism for DPY30 and ASH2L intrinsically disordered regions to modulate the MLL/SET1 activity on chromatin.

Authors:  Young-Tae Lee; Alex Ayoub; Sang-Ho Park; Liang Sha; Jing Xu; Fengbiao Mao; Wei Zheng; Yang Zhang; Uhn-Soo Cho; Yali Dou
Journal:  Nat Commun       Date:  2021-05-19       Impact factor: 14.919

5.  Architecture and subunit arrangement of the complete Saccharomyces cerevisiae COMPASS complex.

Authors:  Yanxing Wang; Zhanyu Ding; Xiangyang Liu; Yu Bao; Min Huang; Catherine C L Wong; Xiaoyu Hong; Yao Cong
Journal:  Sci Rep       Date:  2018-11-27       Impact factor: 4.379

6.  The Set1 complex is dimeric and acts with Jhd2 demethylation to convey symmetrical H3K4 trimethylation.

Authors:  Rupam Choudhury; Sukhdeep Singh; Senthil Arumugam; Assen Roguev; A Francis Stewart
Journal:  Genes Dev       Date:  2019-03-06       Impact factor: 11.361

7.  Hematopoietic stem and progenitor cell proliferation and differentiation requires the trithorax protein Ash2l.

Authors:  Juliane Lüscher-Firzlaff; Nicolas Chatain; Chao-Chung Kuo; Till Braunschweig; Agnieszka Bochyńska; Andrea Ullius; Bernd Denecke; Ivan G Costa; Steffen Koschmieder; Bernhard Lüscher
Journal:  Sci Rep       Date:  2019-06-04       Impact factor: 4.379

8.  Crystal Structure of the COMPASS H3K4 Methyltransferase Catalytic Module.

Authors:  Peter L Hsu; Heng Li; Ho-Tak Lau; Calvin Leonen; Abhinav Dhall; Shao-En Ong; Champak Chatterjee; Ning Zheng
Journal:  Cell       Date:  2018-08-09       Impact factor: 41.582

9.  Evolving Catalytic Properties of the MLL Family SET Domain.

Authors:  Ying Zhang; Anshumali Mittal; James Reid; Stephanie Reich; Steven J Gamblin; Jon R Wilson
Journal:  Structure       Date:  2015-08-27       Impact factor: 5.006

10.  BAP18 coactivates androgen receptor action and promotes prostate cancer progression.

Authors:  Shiying Sun; Xinping Zhong; Chunyu Wang; Hongmiao Sun; Shengli Wang; Tingting Zhou; Renlong Zou; Lin Lin; Ning Sun; Ge Sun; Yi Wu; Botao Wang; Xiaoyu Song; Liu Cao; Yue Zhao
Journal:  Nucleic Acids Res       Date:  2016-05-25       Impact factor: 16.971

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