Literature DB >> 25455858

Quorum-sensing crosstalk-driven synthetic circuits: from unimodality to trimodality.

Fuqing Wu1, David J Menn1, Xiao Wang2.   

Abstract

Widespread quorum-sensing (QS) enables bacteria to communicate and plays a critical role in controlling bacterial virulence. However, effects of promiscuous QS crosstalk and its implications for gene regulation and cell decision-making remain largely unknown. Here we systematically studied the crosstalk between LuxR/I and LasR/I systems and found that QS crosstalk can be dissected into signal crosstalk and promoter crosstalk. Further investigations using synthetic positive feedback circuits revealed that signal crosstalk significantly decreases a circuit's bistable potential while maintaining unimodality. Promoter crosstalk, however, reproducibly generates complex trimodal responses resulting from noise-induced state transitions and host-circuit interactions. A mathematical model that integrates the circuit's nonlinearity, stochasticity, and host-circuit interactions was developed, and its predictions of conditions for trimodality were verified experimentally. Combining synthetic biology and mathematical modeling, this work sheds light on the complex behaviors emerging from QS crosstalk, which could be exploited for therapeutics and biotechnology.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 25455858      PMCID: PMC4272683          DOI: 10.1016/j.chembiol.2014.10.008

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  52 in total

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Journal:  Nature       Date:  2005-05-12       Impact factor: 49.962

5.  Engineered bidirectional communication mediates a consensus in a microbial biofilm consortium.

Authors:  Katie Brenner; David K Karig; Ron Weiss; Frances H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-24       Impact factor: 11.205

6.  A bottom-up approach to gene regulation.

Authors:  Nicholas J Guido; Xiao Wang; David Adalsteinsson; David McMillen; Jeff Hasty; Charles R Cantor; Timothy C Elston; J J Collins
Journal:  Nature       Date:  2006-02-16       Impact factor: 49.962

7.  High-temperature-induced transposition of insertion elements in burkholderia multivorans ATCC 17616.

Authors:  Yoshiyuki Ohtsubo; Hiroyuki Genka; Harunobu Komatsu; Yuji Nagata; Masataka Tsuda
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

8.  Regulation of competence for genetic transformation in Streptococcus pneumoniae by an auto-induced peptide pheromone and a two-component regulatory system.

Authors:  E V Pestova; L S Håvarstein; D A Morrison
Journal:  Mol Microbiol       Date:  1996-08       Impact factor: 3.501

9.  Quorum sensing in Vibrio fischeri: essential elements for activation of the luminescence genes.

Authors:  A M Stevens; E P Greenberg
Journal:  J Bacteriol       Date:  1997-01       Impact factor: 3.490

10.  Promoter specificity in Pseudomonas aeruginosa quorum sensing revealed by DNA binding of purified LasR.

Authors:  M Schuster; M L Urbanowski; E P Greenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-25       Impact factor: 11.205

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  30 in total

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Review 3.  Predictive biology: modelling, understanding and harnessing microbial complexity.

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4.  Design of Adjacent Transcriptional Regions to Tune Gene Expression and Facilitate Circuit Construction.

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Journal:  Cell Syst       Date:  2018-02-07       Impact factor: 10.304

5.  The cellular Ising model: a framework for phase transitions in multicellular environments.

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Journal:  J R Soc Interface       Date:  2016-06       Impact factor: 4.118

6.  Quorum Sensing Communication Modules for Microbial Consortia.

Authors:  Spencer R Scott; Jeff Hasty
Journal:  ACS Synth Biol       Date:  2016-05-19       Impact factor: 5.110

Review 7.  Build to understand: synthetic approaches to biology.

Authors:  Le-Zhi Wang; Fuqing Wu; Kevin Flores; Ying-Cheng Lai; Xiao Wang
Journal:  Integr Biol (Camb)       Date:  2015-12-21       Impact factor: 2.192

8.  Bottom-up approaches in synthetic biology and biomaterials for tissue engineering applications.

Authors:  Mitchell S Weisenberger; Tara L Deans
Journal:  J Ind Microbiol Biotechnol       Date:  2018-03-19       Impact factor: 3.346

Review 9.  Addressing biological uncertainties in engineering gene circuits.

Authors:  Carolyn Zhang; Ryan Tsoi; Lingchong You
Journal:  Integr Biol (Camb)       Date:  2015-12-17       Impact factor: 2.192

10.  Predictable control of RNA lifetime using engineered degradation-tuning RNAs.

Authors:  Qi Zhang; Duo Ma; Fuqing Wu; Kylie Standage-Beier; Xingwen Chen; Kaiyue Wu; Alexander A Green; Xiao Wang
Journal:  Nat Chem Biol       Date:  2021-06-21       Impact factor: 15.040

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