Literature DB >> 25454506

Can your protein be sumoylated? A quick summary and important tips to study SUMO-modified proteins.

Yuxuan Xiao1, Daniel Pollack1, Edward Nieves2, Aby Winchell1, Myrasol Callaway2, Margarita Vigodner3.   

Abstract

A diverse set of SUMO target proteins has been identified. Therefore, there is a growing interest in studying sumoylation and SUMO interactions in cells. When the sumoylation of a protein or a SUMO interaction is suspected, a standard co-immunoprecipitation analysis using anti-SUMO and anti-target protein antibody is usually performed as a first step. However, the identification of endogenous sumoylated proteins is challenging because of the activity of isopeptidases, and often only a small fraction of a target protein is sumoylated at a given time. Here, we briefly summarize several important steps to ensure a successful co-immunoprecipitation analysis to detect possible sumoylation.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Co-immunoprecipitation; In vitro sumoylation; Isopeptidases; Mass spectrometry; SUMO; Sumoylation

Mesh:

Substances:

Year:  2014        PMID: 25454506      PMCID: PMC4404192          DOI: 10.1016/j.ab.2014.11.006

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  28 in total

1.  SUMO-1 conjugation in vivo requires both a consensus modification motif and nuclear targeting.

Authors:  M S Rodriguez; C Dargemont; R T Hay
Journal:  J Biol Chem       Date:  2000-12-21       Impact factor: 5.157

Review 2.  SUMO wrestling with type 1 diabetes.

Authors:  Manyu Li; Dehuang Guo; Carlos M Isales; Decio L Eizirik; Mark Atkinson; Jin-Xiong She; Cong-Yi Wang
Journal:  J Mol Med (Berl)       Date:  2005-04-02       Impact factor: 4.599

Review 3.  SUMO junction-what's your function? New insights through SUMO-interacting motifs.

Authors:  Oliver Kerscher
Journal:  EMBO Rep       Date:  2007-06       Impact factor: 8.807

Review 4.  Modification in reverse: the SUMO proteases.

Authors:  Debaditya Mukhopadhyay; Mary Dasso
Journal:  Trends Biochem Sci       Date:  2007-05-17       Impact factor: 13.807

Review 5.  SUMOylation and deSUMOylation at a glance.

Authors:  Yonggang Wang; Mary Dasso
Journal:  J Cell Sci       Date:  2009-12-01       Impact factor: 5.285

6.  Detection of protein SUMOylation in vivo.

Authors:  Michael H Tatham; Manuel S Rodriguez; Dimitris P Xirodimas; Ronald T Hay
Journal:  Nat Protoc       Date:  2009-09-03       Impact factor: 13.491

Review 7.  Sumoylation modulates oxidative stress relevant to the viability and functionality of pancreatic beta cells.

Authors:  Ping Yang; Shuang Hu; Fei Yang; Xiang-Qian Guan; Shi-Qiang Wang; Ping Zhu; Fei Xiong; Shu Zhang; Junfa Xu; Qi-Lin Yu; Cong-Yi Wang
Journal:  Am J Transl Res       Date:  2014-07-18       Impact factor: 4.060

8.  p53 sumoylation: mechanistic insights from reconstitution studies.

Authors:  Shwu-Yuan Wu; Cheng-Ming Chiang
Journal:  Epigenetics       Date:  2009-10-09       Impact factor: 4.528

9.  Detection of proteins sumoylated in vivo and in vitro.

Authors:  Kevin D Sarge; Ok-Kyong Park-Sarge
Journal:  Methods Mol Biol       Date:  2009

10.  Emerging roles of the SUMO pathway in mitosis.

Authors:  Mary Dasso
Journal:  Cell Div       Date:  2008-01-24       Impact factor: 5.130

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  9 in total

1.  PARIS-DJ-1 Interaction Regulates Mitochondrial Functions in Cardiomyocytes, Which Is Critically Important in Cardiac Hypertrophy.

Authors:  Dibyanti Mukherjee; Vivek Chander; Arun Bandyopadhyay
Journal:  Mol Cell Biol       Date:  2020-12-21       Impact factor: 4.272

2.  C-terminally truncated, kidney-specific variants of the WNK4 kinase lack several sites that regulate its activity.

Authors:  Adrián Rafael Murillo-de-Ozores; Alejandro Rodríguez-Gama; Silvana Bazúa-Valenti; Karla Leyva-Ríos; Norma Vázquez; Diana Pacheco-Álvarez; Inti A De La Rosa-Velázquez; Agnieszka Wengi; Kathryn L Stone; Junhui Zhang; Johannes Loffing; Richard P Lifton; Chao-Ling Yang; David H Ellison; Gerardo Gamba; Maria Castañeda-Bueno
Journal:  J Biol Chem       Date:  2018-06-19       Impact factor: 5.157

3.  Inhibition of CDK1 activity by sumoylation.

Authors:  Yuxuan Xiao; Benjamin Lucas; Elana Molcho; Tania Schiff; Margarita Vigodner
Journal:  Biochem Biophys Res Commun       Date:  2016-08-10       Impact factor: 3.575

4.  Identification of cell-specific targets of sumoylation during mouse spermatogenesis.

Authors:  Yuxuan Xiao; Daniel Pollack; Miriam Andrusier; Avi Levy; Myrasol Callaway; Edward Nieves; Prabhakara Reddi; Margarita Vigodner
Journal:  Reproduction       Date:  2016-02       Impact factor: 3.906

5.  Release of transcriptional repression via ErbB2-induced, SUMO-directed phosphorylation of myeloid zinc finger-1 serine 27 activates lysosome redistribution and invasion.

Authors:  Ditte Marie Brix; Siri Amanda Tvingsholm; Malene Bredahl Hansen; Knut Bundgaard Clemmensen; Tiina Ohman; Valentina Siino; Matteo Lambrughi; Klaus Hansen; Pietri Puustinen; Irina Gromova; Peter James; Elena Papaleo; Markku Varjosalo; José Moreira; Marja Jäättelä; Tuula Kallunki
Journal:  Oncogene       Date:  2019-01-08       Impact factor: 9.867

6.  Inhibition of the Ubc9 E2 SUMO-conjugating enzyme-CRMP2 interaction decreases NaV1.7 currents and reverses experimental neuropathic pain.

Authors:  Liberty François-Moutal; Erik T Dustrude; Yue Wang; Tatiana Brustovetsky; Angie Dorame; Weina Ju; Aubin Moutal; Samantha Perez-Miller; Nickolay Brustovetsky; Vijay Gokhale; May Khanna; Rajesh Khanna
Journal:  Pain       Date:  2018-10       Impact factor: 7.926

7.  Analysis of SUMO1-conjugation at synapses.

Authors:  James A Daniel; Benjamin H Cooper; Jorma J Palvimo; Fu-Ping Zhang; Nils Brose; Marilyn Tirard
Journal:  Elife       Date:  2017-06-09       Impact factor: 8.140

8.  Composition of the Intranuclear Inclusions of Fragile X-associated Tremor/Ataxia Syndrome.

Authors:  Lisa Ma; Anthony W Herren; Glenda Espinal; Jamie Randol; Bridget McLaughlin; Veronica Martinez-Cerdeño; Isaac N Pessah; Randi J Hagerman; Paul J Hagerman
Journal:  Acta Neuropathol Commun       Date:  2019-09-03       Impact factor: 7.801

Review 9.  The Next Frontier: Translational Development of Ubiquitination, SUMOylation, and NEDDylation in Cancer.

Authors:  Nicole E Pellegrino; Arcan Guven; Kayleigh Gray; Punit Shah; Gargi Kasture; Maria-Dorothea Nastke; Anjan Thakurta; Stephane Gesta; Vivek K Vishnudas; Niven R Narain; Michael A Kiebish
Journal:  Int J Mol Sci       Date:  2022-03-23       Impact factor: 5.923

  9 in total

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