Literature DB >> 25447074

A High-Content Assay for Biosensor Validation and for Examining Stimuli that Affect Biosensor Activity.

Scott D Slattery1, Klaus M Hahn.   

Abstract

Biosensors are valuable tools used to monitor many different protein behaviors in vivo. Demand for new biosensors is high, but their development and characterization can be difficult. During biosensor design, it is necessary to evaluate the effects of different biosensor structures on specificity, brightness, and fluorescence responses. By co-expressing the biosensor with upstream proteins that either stimulate or inhibit the activity reported by the biosensor, one can determine the difference between the biosensor's maximally activated and inactivated state, and examine response to specific proteins. We describe here a method for biosensor validation in a 96-well plate format using an automated microscope. This protocol produces dose-response curves, enables efficient examination of many parameters, and unlike cell suspension assays, allows visual inspection (e.g., for cell health and biosensor or regulator localization). Optimization of single-chain and dual-chain Rho GTPase biosensors is addressed, but the assay is applicable to any biosensor that can be expressed or otherwise loaded in adherent cells. The assay can also be used for purposes other than biosensor validation, using a well-characterized biosensor as a readout for effects of upstream molecules.
Copyright © 2014 John Wiley & Sons, Inc.

Entities:  

Keywords:  FRET; HC screening; biosensor; fluorescence; microplate assay

Mesh:

Substances:

Year:  2014        PMID: 25447074      PMCID: PMC4324324          DOI: 10.1002/0471143030.cb1415s65

Source DB:  PubMed          Journal:  Curr Protoc Cell Biol        ISSN: 1934-2616


  10 in total

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Authors:  A Miyawaki; R Y Tsien
Journal:  Methods Enzymol       Date:  2000       Impact factor: 1.600

Review 2.  Rho GTPase-activating proteins in cell regulation.

Authors:  Sun Young Moon; Yi Zheng
Journal:  Trends Cell Biol       Date:  2003-01       Impact factor: 20.808

3.  A versatile toolkit to produce sensitive FRET biosensors to visualize signaling in time and space.

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Journal:  Sci Signal       Date:  2013-07-23       Impact factor: 8.192

4.  Spatiotemporal dynamics of RhoA activity in migrating cells.

Authors:  Olivier Pertz; Louis Hodgson; Richard L Klemke; Klaus M Hahn
Journal:  Nature       Date:  2006-03-19       Impact factor: 49.962

5.  Delineation of the Cdc42/Rac-binding domain of p21-activated kinase.

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Journal:  Biochemistry       Date:  1998-05-26       Impact factor: 3.162

Review 6.  GEF means go: turning on RHO GTPases with guanine nucleotide-exchange factors.

Authors:  Kent L Rossman; Channing J Der; John Sondek
Journal:  Nat Rev Mol Cell Biol       Date:  2005-02       Impact factor: 94.444

Review 7.  The 'invisible hand': regulation of RHO GTPases by RHOGDIs.

Authors:  Rafael Garcia-Mata; Etienne Boulter; Keith Burridge
Journal:  Nat Rev Mol Cell Biol       Date:  2011-07-22       Impact factor: 94.444

8.  Localized Rac activation dynamics visualized in living cells.

Authors:  V S Kraynov; C Chamberlain; G M Bokoch; M A Schwartz; S Slabaugh; K M Hahn
Journal:  Science       Date:  2000-10-13       Impact factor: 47.728

9.  Activation of rac and cdc42 video imaged by fluorescent resonance energy transfer-based single-molecule probes in the membrane of living cells.

Authors:  Reina E Itoh; Kazuo Kurokawa; Yusuke Ohba; Hisayoshi Yoshizaki; Naoki Mochizuki; Michiyuki Matsuda
Journal:  Mol Cell Biol       Date:  2002-09       Impact factor: 4.272

10.  Coordination of Rho GTPase activities during cell protrusion.

Authors:  Matthias Machacek; Louis Hodgson; Christopher Welch; Hunter Elliott; Olivier Pertz; Perihan Nalbant; Amy Abell; Gary L Johnson; Klaus M Hahn; Gaudenz Danuser
Journal:  Nature       Date:  2009-08-19       Impact factor: 49.962

  10 in total
  5 in total

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Authors:  Bei Liu; Orrin J Stone; Michael Pablo; J Cody Herron; Ana T Nogueira; Onur Dagliyan; Jonathan B Grimm; Luke D Lavis; Timothy C Elston; Klaus M Hahn
Journal:  Cell       Date:  2021-10-11       Impact factor: 41.582

2.  Live-Cell Imaging and Analysis with Multiple Genetically Encoded Reporters.

Authors:  Michael Pargett; John G Albeck
Journal:  Curr Protoc Cell Biol       Date:  2018-03

3.  Spatiotemporal dynamics of GEF-H1 activation controlled by microtubule- and Src-mediated pathways.

Authors:  Mihai L Azoitei; Jungsik Noh; Daniel J Marston; Philippe Roudot; Christopher B Marshall; Timothy A Daugird; Sidney L Lisanza; María-José Sandí; Mitsu Ikura; John Sondek; Robert Rottapel; Klaus M Hahn; Gaudenz Danuser
Journal:  J Cell Biol       Date:  2019-08-16       Impact factor: 10.539

4.  Software for lattice light-sheet imaging of FRET biosensors, illustrated with a new Rap1 biosensor.

Authors:  Ellen C O'Shaughnessy; Orrin J Stone; Paul K LaFosse; Mihai L Azoitei; Denis Tsygankov; John M Heddleston; Wesley R Legant; Erika S Wittchen; Keith Burridge; Timothy C Elston; Eric Betzig; Teng-Leong Chew; David Adalsteinsson; Klaus M Hahn
Journal:  J Cell Biol       Date:  2019-08-23       Impact factor: 10.539

5.  Computational design of chemogenetic and optogenetic split proteins.

Authors:  Onur Dagliyan; Andrey Krokhotin; Irem Ozkan-Dagliyan; Alexander Deiters; Channing J Der; Klaus M Hahn; Nikolay V Dokholyan
Journal:  Nat Commun       Date:  2018-10-02       Impact factor: 14.919

  5 in total

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