Literature DB >> 25446281

"Post-it" type connected DNA created with a reversible covalent cross-link.

María Tomás-Gamasa1, Sascha Serdjukow, Meng Su, Markus Müller, Thomas Carell.   

Abstract

We report the development of a new heterobase that is held together through reversible bonding. The so-formed cross-link adds strong stabilization to the DNA duplex. Despite this, the cross-link opens and closes through reversible imine bonding. Moreover, even enzymatic incorporation of the cross-link is possible. The new principle can be used to stabilize DNA duplexes and nanostructures that otherwise require high salt concentrations, which may hinder biological applications.
© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA; DNA cross-linking; DNA nanostructures; imines; reversible bonding

Mesh：

Substances：

Year:  2014        PMID： 25446281     DOI： 10.1002/anie.201407854

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


  13 in total

Review 1.  A role for the base excision repair enzyme NEIL3 in replication-dependent repair of interstrand DNA cross-links derived from psoralen and abasic sites.

Authors:  Zhiyu Yang; Maryam Imani Nejad; Jacqueline Gamboa Varela; Nathan E Price; Yinsheng Wang; Kent S Gates
Journal:  DNA Repair (Amst)       Date:  2017-02-20

2.  Biomimetic Generation and Remodeling of Phospholipid Membranes by Dynamic Imine Chemistry.

Authors:  Andrés Seoane; Roberto J Brea; Alberto Fuertes; Kira A Podolsky; Neal K Devaraj
Journal:  J Am Chem Soc       Date:  2018-06-13       Impact factor: 15.419

3.  Simple, High-Yield Syntheses of DNA Duplexes Containing Interstrand DNA-DNA Cross-Links Between an N(4) -Aminocytidine Residue and an Abasic Site.

Authors:  Jacqueline Gamboa Varela; Kent S Gates
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2016-06-01

4.  A Compact DNA Cube with Side Length 10 nm.

Authors:  Max B Scheible; Luvena L Ong; Johannes B Woehrstein; Ralf Jungmann; Peng Yin; Friedrich C Simmel
Journal:  Small       Date:  2015-08-21       Impact factor: 13.281

5.  Facile preparation of model DNA interstrand cross-link repair intermediates using ribonucleotide-containing DNA.

Authors:  Jin Tang; Feng Tang; Linlin Zhao
Journal:  DNA Repair (Amst)       Date:  2022-01-31

6.  Characterization of Interstrand DNA-DNA Cross-Links Using the α-Hemolysin Protein Nanopore.

Authors:  Xinyue Zhang; Nathan E Price; Xi Fang; Zhiyu Yang; Li-Qun Gu; Kent S Gates
Journal:  ACS Nano       Date:  2015-11-18       Impact factor: 15.881

7.  Interstrand DNA Cross-Links Derived from Reaction of a 2-Aminopurine Residue with an Abasic Site.

Authors:  Maryam Imani Nejad; Nathan E Price; Tuhin Haldar; Calvin Lewis; Yinsheng Wang; Kent S Gates
Journal:  ACS Chem Biol       Date:  2019-07-01       Impact factor: 5.100

8.  Synthesis of DNA Duplexes Containing Site-Specific Interstrand Cross-Links via Sequential Reductive Amination Reactions Involving Diamine Linkers and Abasic Sites on Complementary Oligodeoxynucleotides.

Authors:  Kurt Housh; Kent S Gates
Journal:  Chem Res Toxicol       Date:  2021-10-25       Impact factor: 3.739

9.  Designing DNA nanodevices for compatibility with the immune system of higher organisms.

Authors:  Sunaina Surana; Avinash R Shenoy; Yamuna Krishnan
Journal:  Nat Nanotechnol       Date:  2015-09       Impact factor: 39.213

10.  Structural revisions of small molecules reported to cross-link G-quadruplex DNA in vivo reveal a repetitive assignment error in the literature.

Authors:  Paul E Reyes-Gutiérrez; Tomáš Kapal; Blanka Klepetářová; David Šaman; Radek Pohl; Zbigniew Zawada; Erika Kužmová; Miroslav Hájek; Filip Teplý
Journal:  Sci Rep       Date:  2016-03-23       Impact factor: 4.379
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