Literature DB >> 2543977

Escherichia coli DNA helicase II (uvrD gene product) catalyzes the unwinding of DNA.RNA hybrids in vitro.

S W Matson1.   

Abstract

DNA helicase II is a well-characterized Escherichia coli enzyme capable of unwinding duplex DNA and known to be involved in both methyl-directed mismatch repair and excision repair of pyrimidine dimers. Here it is shown that this enzyme also catalyzes the ATP-dependent unwinding of a DNA.RNA hybrid consisting of a radioactively labeled RNA molecule annealed on M13 single-stranded DNA. The DNA.RNA unwinding reaction required less protein to unwind more base pairs than the corresponding unwinding of duplex DNA. In addition, the rate of unwinding of the DNA.RNA hybrid was more than an order of magnitude faster than unwinding of a DNA partial duplex of similar length. The unwinding of the DNA.RNA hybrid is a property unique to helicase II since helicase I, Rep protein, and helicase IV failed to catalyze the reaction. In light of these results it seems likely that helicase II is involved in some previously unrecognized aspect of nucleic acid metabolism, in addition to its known roles in DNA repair reactions.

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Year:  1989        PMID: 2543977      PMCID: PMC287283          DOI: 10.1073/pnas.86.12.4430

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Purification of the rep protein of Escherichia coli. An ATPase which separates duplex DNA strands in advance of replication.

Authors:  J F Scott; A Kornberg
Journal:  J Biol Chem       Date:  1978-05-10       Impact factor: 5.157

2.  Enzyme-catalyzed DNA unwinding: studies on Escherichia coli rep protein.

Authors:  G T Yarranton; M L Gefter
Journal:  Proc Natl Acad Sci U S A       Date:  1979-04       Impact factor: 11.205

3.  DNA unwinding enzyme II of Escherichia coli. 2. Characterization of the DNA unwinding activity.

Authors:  M Abdel-Monem; H Dürwald; H Hoffmann-Berling
Journal:  Eur J Biochem       Date:  1977-09-15

4.  DNA unwinding enzyme II of Escherichia coli. 1. Purification and characterization of the ATPase activity.

Authors:  M Abdel-Monem; M C Chanal; H Hoffmann-Berling
Journal:  Eur J Biochem       Date:  1977-09-15

5.  Enzymic unwinding of DNA. 2. Chain separation by an ATP-dependent DNA unwinding enzyme.

Authors:  M Abdel-Monem; H Dürwald; H Hoffmann-Berling
Journal:  Eur J Biochem       Date:  1976-06-01

6.  RAD3 protein of Saccharomyces cerevisiae is a DNA helicase.

Authors:  P Sung; L Prakash; S W Matson; S Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

7.  Loss and restoration of viability of E. coli due to combinations of mutations affecting DNA polymerase I and repair activities.

Authors:  G B Smirnov; E V Filkova; A G Skavronskaya; A S Saenko; B I Sinzinis
Journal:  Mol Gen Genet       Date:  1973-03-01

8.  Properties of uvrE mutants of Escherichia coli K12. II. Construction and properties of pol and rec derivatives.

Authors:  I E Mattern; P C Houtman
Journal:  Mutat Res       Date:  1974-12       Impact factor: 2.433

9.  Hyper-recombination in uvrD mutants of Escherichia coli K-12.

Authors:  H M Arthur; R G Lloyd
Journal:  Mol Gen Genet       Date:  1980

10.  A system for shotgun DNA sequencing.

Authors:  J Messing; R Crea; P H Seeburg
Journal:  Nucleic Acids Res       Date:  1981-01-24       Impact factor: 16.971

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  30 in total

1.  Genetic recombination in Bacillus subtilis 168: effect of DeltahelD on DNA repair and homologous recombination.

Authors:  B Carrasco; S Fernández; M A Petit; J C Alonso
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

2.  Resolving Holliday junctions with Escherichia coli UvrD helicase.

Authors:  Annamarie S Carter; Kambiz Tahmaseb; Sarah A Compton; Steven W Matson
Journal:  J Biol Chem       Date:  2012-01-20       Impact factor: 5.157

3.  DNA helicase IV from HeLa cells.

Authors:  N Tuteja; K Rahman; R Tuteja; A Falaschi
Journal:  Nucleic Acids Res       Date:  1991-07-11       Impact factor: 16.971

4.  Replication-Transcription Conflicts Generate R-Loops that Orchestrate Bacterial Stress Survival and Pathogenesis.

Authors:  Kevin S Lang; Ashley N Hall; Christopher N Merrikh; Mark Ragheb; Hannah Tabakh; Alex J Pollock; Joshua J Woodward; Julia E Dreifus; Houra Merrikh
Journal:  Cell       Date:  2017-08-10       Impact factor: 41.582

5.  RecD2 helicase limits replication fork stress in Bacillus subtilis.

Authors:  Brian W Walsh; Samantha A Bolz; Sarah R Wessel; Jeremy W Schroeder; James L Keck; Lyle A Simmons
Journal:  J Bacteriol       Date:  2014-01-17       Impact factor: 3.490

6.  Mutations in motif II of Escherichia coli DNA helicase II render the enzyme nonfunctional in both mismatch repair and excision repair with differential effects on the unwinding reaction.

Authors:  R M Brosh; S W Matson
Journal:  J Bacteriol       Date:  1995-10       Impact factor: 3.490

7.  DNA helicase III from HeLa cells: an enzyme that acts preferentially on partially unwound DNA duplexes.

Authors:  N Tuteja; K Rahman; R Tuteja; A Ochem; D Skopac; A Falaschi
Journal:  Nucleic Acids Res       Date:  1992-10-25       Impact factor: 16.971

8.  Yeast Helicase Pif1 Unwinds RNA:DNA Hybrids with Higher Processivity than DNA:DNA Duplexes.

Authors:  Shubeena Chib; Alicia K Byrd; Kevin D Raney
Journal:  J Biol Chem       Date:  2016-01-05       Impact factor: 5.157

9.  Development of a novel one-tube isothermal reverse transcription thermophilic helicase-dependent amplification platform for rapid RNA detection.

Authors:  James Goldmeyer; Huimin Kong; Wen Tang
Journal:  J Mol Diagn       Date:  2007-11       Impact factor: 5.568

10.  The helicases DinG, Rep and UvrD cooperate to promote replication across transcription units in vivo.

Authors:  Hasna Boubakri; Anne Langlois de Septenville; Enrique Viguera; Bénédicte Michel
Journal:  EMBO J       Date:  2009-10-22       Impact factor: 11.598

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