Literature DB >> 2543954

Characteristics of a multicopy gene family predominantly consisting of processed pseudogenes.

A M Van den Ouweland1, H L Van Duijnhoven, K A Deichmann, J J Van Groningen, L de Leij, W J Van de Ven.   

Abstract

The monoclonal antibody MOC-32 detected a 40 kDa protein in Western blot analysis. Immunological screening of an expression library of human SCLC cells with MOC-32 led to the isolation of overlapping cDNA clones. One of these, cHD4, was 1.0 kbp long and of about the same size as its corresponding mRNA. Preceded by an in phase stop codon, an open reading frame of 885 bp was present in cHD4 and a translational product of only 33 kDa could be calculated. Biochemical and immunological analysis established the relationship between the 40 kDa antigen and the isolated coding sequences and resolved the apparent discrepancy between the calculated molecular weight and the observed electrophoretic mobility. Nucleotide sequence comparison of cHD4 to the EMBL database revealed that cHD4 was nearly identical to a sequence claimed to encode a laminin binding protein. Southern blot and nucleotide sequence analysis indicated the presence of multiple copies of the gene in the human genome. At least five of these appeared to represent processed pseudogenes.

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Year:  1989        PMID: 2543954      PMCID: PMC317862          DOI: 10.1093/nar/17.10.3829

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  25 in total

1.  The human genome contains a pseudogene for the Mr=32,000 laminin binding protein.

Authors:  B Segui-Real; C Rhodes; Y Yamada
Journal:  Nucleic Acids Res       Date:  1989-02-11       Impact factor: 16.971

2.  Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications.

Authors:  H Towbin; T Staehelin; J Gordon
Journal:  Proc Natl Acad Sci U S A       Date:  1979-09       Impact factor: 11.205

3.  Efficient isolation of genes by using antibody probes.

Authors:  R A Young; R W Davis
Journal:  Proc Natl Acad Sci U S A       Date:  1983-03       Impact factor: 11.205

4.  An interactive graphics program for comparing and aligning nucleic acid and amino acid sequences.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1982-05-11       Impact factor: 16.971

5.  A simple method for displaying the hydropathic character of a protein.

Authors:  J Kyte; R F Doolittle
Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

6.  Plasmid screening at high colony density.

Authors:  D Hanahan; M Meselson
Journal:  Gene       Date:  1980-06       Impact factor: 3.688

7.  Analysis of single- and double-stranded nucleic acids on polyacrylamide and agarose gels by using glyoxal and acridine orange.

Authors:  G K McMaster; G G Carmichael
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

8.  Characterization of the feline c-abl proto-oncogene.

Authors:  J A Schalken; A M van den Ouweland; H P Bloemers; W J van de Ven
Journal:  Biochim Biophys Acta       Date:  1985-02-20

9.  The human LDL receptor: a cysteine-rich protein with multiple Alu sequences in its mRNA.

Authors:  T Yamamoto; C G Davis; M S Brown; W J Schneider; M L Casey; J L Goldstein; D W Russell
Journal:  Cell       Date:  1984-11       Impact factor: 41.582

10.  Purification of mouse immunoglobulin heavy-chain messenger RNAs from total myeloma tumor RNA.

Authors:  C Auffray; F Rougeon
Journal:  Eur J Biochem       Date:  1980-06
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  6 in total

1.  Characterization of two monoclonal antibodies directed against the 67 kDa high affinity laminin receptor and application for the study of breast carcinoma progression.

Authors:  S Martignone; R Pellegrini; E Villa; N N Tandon; A Mastroianni; E Tagliabue; S Ménard; M I Colnaghi
Journal:  Clin Exp Metastasis       Date:  1992-11       Impact factor: 5.150

2.  Corruption of genomic databases with anomalous sequence.

Authors:  E D Lamperti; J M Kittelberger; T F Smith; L Villa-Komaroff
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

3.  The 67-kd laminin receptor is preferentially expressed by proliferating retinal vessels in a murine model of ischemic retinopathy.

Authors:  A W Stitt; D McKenna; D A Simpson; T A Gardiner; P Harriott; D B Archer; J Nelson
Journal:  Am J Pathol       Date:  1998-05       Impact factor: 4.307

4.  YAC/P1 contigs defining the location of 56 microsatellite markers and several genes across a 3.4-cM interval on mouse chromosome 11.

Authors:  M Nehls; K Lüno; M Schorpp; D Pfeifer; S Krause; U Matysiak-Scholze; H Dierbach; T Boehm
Journal:  Mamm Genome       Date:  1995-05       Impact factor: 2.957

5.  An Arabidopsis cDNA encoding a 33-kilodalton laminin receptor homolog.

Authors:  M Axelos; C Bardet; B Lescure
Journal:  Plant Physiol       Date:  1993-09       Impact factor: 8.340

6.  Genetic linkage analysis in recombinant inbred mice of P40, a putative clone for the high-affinity laminin receptor.

Authors:  P J Douville; S Carbonetto
Journal:  Mamm Genome       Date:  1992       Impact factor: 2.957

  6 in total

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