Literature DB >> 25433126

A novel open-barrel structure of octameric translin reveals a potential RNA entryway.

Elad Eliahoo1, Ailie Marx1, Haim Manor1, Akram Alian2.   

Abstract

The single-stranded DNA (ssDNA)/RNA binding protein translin was suggested to be involved in chromosomal translocations, telomere metabolism, and mRNA transport and translation. Oligonucleotide binding surfaces map within a closed cavity of translin octameric barrels, raising the question as to how DNA/RNA gain access to this inner cavity, particularly given that, to date, none of the barrel structures reported hint to an entryway. Here, we argue against a mechanism by which translin octamers may "dissociate and reassemble" upon RNA binding and report a novel "open"-barrel structure of human translin revealing a feasible DNA/RNA entryway into the cavity. Additionally, we report that translin not only is confined to binding of ssDNA oligonucleotides, or single-stranded extensions of double-stranded DNA (dsDNA), but also can bind single-stranded sequences internally embedded in dsDNA molecules.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  RNA; TRAX; octamer; open barrel; translin

Mesh:

Substances:

Year:  2014        PMID: 25433126     DOI: 10.1016/j.jmb.2014.11.013

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  4 in total

1.  Regulation of the activity of the promoter of RNA-induced silencing, C3PO.

Authors:  Shriya Sahu; Leo Williams; Alberto Perez; Finly Philip; Giuseppe Caso; Walter Zurawsky; Suzanne Scarlata
Journal:  Protein Sci       Date:  2017-07-17       Impact factor: 6.725

Review 2.  Translin: A multifunctional protein involved in nucleic acid metabolism.

Authors:  Alka Gupta; Vinayaki S Pillai; Rajani Kant Chittela
Journal:  J Biosci       Date:  2019-12       Impact factor: 1.826

3.  Structural basis for single-stranded RNA recognition and cleavage by C3PO.

Authors:  Jing Zhang; Hehua Liu; Qingqing Yao; Xiang Yu; Yiqing Chen; Ruixue Cui; Baixing Wu; Lina Zheng; Junjun Zuo; Zhen Huang; Jinbiao Ma; Jianhua Gan
Journal:  Nucleic Acids Res       Date:  2016-09-04       Impact factor: 16.971

4.  Structural insights into Drosophila-C3PO complex assembly and 'Dynamic Side Port' model in substrate entry and release.

Authors:  Xiaobing Mo; Xia Yang; Yuren Adam Yuan
Journal:  Nucleic Acids Res       Date:  2018-09-19       Impact factor: 16.971

  4 in total

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