| Literature DB >> 25426475 |
Abstract
The development of the layered cerebral cortex starts with a process called preplate splitting. Preplate splitting involves the establishment of prospective cortical layer 6 (L6) neurons within a plexus of pioneer neurons called the preplate. The forming layer 6 splits the preplate into a superficial layer of pioneer neurons called the marginal zone and a deeper layer of pioneer neurons called the subplate. Disruptions of this early developmental event by toxin exposure or mutation are associated with neurological disease including severe <span class="Disease">intellectual disability. This review explores recent findings that reveal the dynamism of gene expression and morphological differentiation during this early developmental period. Over 1000 genes show expression increases of ≥2-fold during this period in differentiating mouse L6 neurons. Surprisingly, 88% of previously identified non-syndromic intellectual-disability (NS-ID) genes are expressed at this time and show an average expression increase of 1.6-fold in these differentiating L6 neurons. This changing genetic program must, in part, support the dramatic cellular reorganizations that occur during preplate splitting. While different models have been proposed for the formation of a layer of L6 cortical neurons within the preplate, original histological studies and more recent work exploiting transgenic mice suggest that the process is largely driven by the coordinated polarization and coalescence of L6 neurons rather than by cellular translocation or migration. The observation that genes associated with forms of NS-ID are expressed during very early cortical development raises the possibility of studying the relevant biological events at a time point when the cortex is small, contains relatively few cell types, and few functional circuits. This review then outlines how explant models may prove particularly useful in studying the consequence of toxin and mutation on the etiology of some forms of NS-ID.Entities:
Keywords: Golgi apparatus; dendritogenesis; fetal alcohol spectrum disorders; preplate; reelin
Year: 2014 PMID: 25426475 PMCID: PMC4227491 DOI: 10.3389/fped.2014.00121
Source DB: PubMed Journal: Front Pediatr ISSN: 2296-2360 Impact factor: 3.418
List of non-syndromic intellectual disability (NS-ID) genes expressed in immature excitatory neurons.
| Gene | Affymetrix ID | Non-syndromic/syndromic | Gene name | Gene function | Protein localization | E13.5 GFP− precursor RMA | E13.5 GFP+ neuron RMA | E14.5 GFP+ neuron RMA | E13.5 RMA fold-up | E14.5 RMA fold-up |
|---|---|---|---|---|---|---|---|---|---|---|
| ACSL4 | 10607089 | NS | Acyl-CoA synthetase long-chain family member 4 | Fatty acid metabolism | Mito | 8.3 | 8.5 | 8.0 | 1.2 | 0.8 |
| AFF2/FMR2 | 10599927 | NS | Fragile X mental retardation 2 | DNA binding protein/activator of transcription? | Nuc | 8.0 | 9.9 | 9.7 | 3.7 | 3.2 |
| AGTR2 | 10599001 | NS/S | Angiotensin II receptor, type 2 | G-protein-coupled receptor/programed cell death | PM | 5.4 | 5.3 | 5.5 | 0.9 | 1.0 |
| AP1S2 | 10603051 | NS/S | Adaptor-related protein complex 1 sigma 2 subunit | Clathrin recruitment and sorting/synaptic vesicles | Golgi | 8.8 | 9.3 | 9.2 | 1.4 | 1.3 |
| ARHGEF6 | 10604713 | NS | Rac/Cdc42 guanine nucleotide exchange factor 6 | GEF for Rac and Cdc42 | Cyto | 6.1 | 4.5 | 4.7 | 0.3 | 0.4 |
| ARX | 10600755 | NS/S | Aristaless related homeobox | Transcriptional regulation during development | Nuc | 9.8 | 7.2 | 7.4 | 0.2 | 0.2 |
| ATRX | 10606263 | NS/S | Transcriptional regulator ATRX | Chromatin remodeling | Nuc | 10.2 | 10.5 | 10.4 | 1.2 | 1.2 |
| BRWD3 | 10606393 | NS/S | Bromo domain and WD repeat protein 3 | JAK/STAT signaling in drosophila/chromatin modifier? | Nuc | 8.7 | 9.3 | 9.0 | 1.5 | 1.2 |
| CASK | 10603708 | NS/S | Calcium/calmodulin-dependent serine kinase | Kinase and scaffolding at synapses/MAGUK family protein | Syn, PM, Nuc, Cyto | 10.3 | 11.5 | 11.4 | 2.2 | 2.2 |
| CC2D1A | 10580100 | NS | Coiled-coil and C2 domain containing 1A | Transcriptional regulator/NF-κB pathway activator | Nuc, Cyto | 7.6 | 7.9 | 7.9 | 1.2 | 1.2 |
| CDH15 | 10576175 | NS/S | Cadherin 15 | Intercellular adhesion protein | PM | 7.1 | 7.0 | 7.1 | 0.9 | 1.0 |
| CRBN | 10546775 | NS | Cereblon | Expression of potassium channels | PM, Cyto | 9.4 | 10.0 | 9.8 | 1.5 | 1.3 |
| DLG3 | 10601062 | NS | Synapse-associated protein 102 | Post-synaptic density scaffold/MAGUK family protein | Syn, PM, ER, Cyto | 8.9 | 9.5 | 9.5 | 1.5 | 1.5 |
| DOCK8 | 10462140 | Dedicator of cytokinesis 8 | GEF?/F-actin organization | PM, Cyto, Nuc | 6.1 | 6.1 | 6.1 | 1.0 | 1.0 | |
| FGD1 | 10602401 | NS/S | Faciogenital dysplasia protein | GEF for Cdc42 | Cyto | 9.3 | 9.1 | 9.2 | 0.9 | 0.9 |
| FTSJ1 | 10603508 | NS | FtsJ homolog 1 | rRNA processing | Nuc | 9.8 | 9.9 | 9.7 | 1.1 | 0.9 |
| GDI1 | 10600390 | NS | GDP dissociation inhibitor 1 | Inhibitor of Rab GTPases | Cyto | 11.7 | 12.8 | 12.5 | 2.2 | 1.8 |
| GRIK2 | 10368999 | NS | Glutamate receptor, ionotropic„ kainate 2 | Subunit of glutamate receptor (kainate) | PM, Syn | 9.7 | 10.2 | 9.2 | 1.4 | 0.7 |
| HUWE1 | 10602501 | NS/S | HECT, UBA, and WWE domain containing 1 | Ubiquitin E3 ligase/protein ubiquitination | Nuc, Cyto | 10.5 | 10.5 | 10.6 | 1.0 | 1.0 |
| IL1RAPL1 | NS | Interleukin 1 receptor accessory protein-like 1 | Vesicle release/dendrite differentiation | PM | ||||||
| JARID1C/KDM5C | 10602644 | NS | Jumonji, AT rich interactive domain 1C | Transcriptional regulation/chromatin remodeling | Nuc | 9.9 | 9.8 | 10.0 | 0.9 | 1.1 |
| KIRREL3 | 10584165 | NS/S | Kin of IRRE like 3 | Synaptogenesis? | PM, Cyto, EC | 7.5 | 8.9 | 9.3 | 2.5 | 3.3 |
| MAGT1 | 10606301 | NS | Magnesium transporter 1 | Mg2+ uptake/N-glycosylation | ER | 10.4 | 8.5 | 8.2 | 0.3 | 0.2 |
| MBD5 | 10471967 | NS/S | Methyl-CpG binding domain protein 5 | Transcriptional regulation? | Nuc | 7.8 | 8.5 | 8.5 | 1.6 | 1.6 |
| MECP2 | 10605247 | NS/S | Methyl-CpG binding protein 2 | Transcriptional regulation | Nuc | 8.8 | 9.0 | 9.1 | 1.1 | 1.2 |
| NLGN4X | 10601152 | NS | X-linked neuroligin 4 | Synaptic adhesion protein | PM, Syn | 9.5 | 9.9 | 9.8 | 1.3 | 1.2 |
| OPHN1 | 10605884 | NS/S | Oligophrenin 1 | Rho-GTPase activating protein | Cyto | 8.2 | 9.3 | 9.3 | 2.2 | 2.1 |
| PAK3 | 10602198 | NS | p21-activated kinase 3 | Effector of Rho-GTPases | Cyto | 9.9 | 10.1 | 9.9 | 1.1 | 1.0 |
| PQBP1 | 10603373 | NS/S | Polyglutamine binding protein 1 | Transcriptional regulation | Nuc, Cyto | 10.9 | 11.3 | 10.8 | 1.3 | 1.0 |
| PRSS12 | 10495854 | NS | Neurotrypsin | Synaptic protease/cleaves agrin/synaptic plasticity | EC | 6.9 | 7.3 | 7.1 | 1.3 | 1.2 |
| PTCHD1 | 10607486 | NS | Patched domain 1 | Hedgehog receptor? | PM | 6.4 | 6.5 | 6.4 | 1.1 | 0.9 |
| RPS6KA3 | 10602772 | NS/S | Ribosomal protein S6 kinase, 90kDa, polypeptide 3 | Ras/Map/ERK regulation | Cyto | 9.8 | 9.8 | 9.6 | 1.0 | 0.9 |
| SHANK2 | 10559343 | NS | SH3 and multiple ankyrin repeat domains 2 | Scaffolding and cell adhesion protein/synaptic plasticity | Cyto, Syn | 7.1 | 7.7 | 7.9 | 1.5 | 1.7 |
| SHROOM4 | 10598240 | NS/S | Shroom family member 4 | Cytoskeletal architecture | Cyto | 6.2 | 5.7 | 5.8 | 0.7 | 0.8 |
| SLC6A8 | 10600210 | NS | Solute carrier family 6 member 8 | Creatine transporter | PM | 8.4 | 8.3 | 8.5 | 0.9 | 1.1 |
| STXBP1 | 10481711 | NS | Syntaxin-binding protein 1 | Synaptic vesicle docking and fusion/neurotransmission | PM, Syn, Cyto | 8.6 | 10.8 | 10.9 | 4.6 | 5.0 |
| SYNGAP1 | 10443091 | NS | Synaptic Ras GTPase activating protein 1 | NMDA receptor complex/Ras/Map/ERK regulation | PM, Syn | 9.6 | 10.2 | 10.7 | 1.6 | 2.1 |
| SYP | 10598359 | NS/S | Synaptophysin | Synaptic vesicle protein | Syn | 8.8 | 10.9 | 10.6 | 4.2 | 3.5 |
| TSPAN7 | 10598626 | NS/S | Tetraspanin 7 | Synapse maturation? | PM, Syn | 11.9 | 11.7 | 11.2 | 0.8 | 0.6 |
| TRAPPC9 | NS | NIK- and IKKB-binding protein | Neuronal NF-κB signaling/vesicular transport | Golgi, ER, Cyto | ||||||
| TUSC3 | 10571371 | NS | Tumor suppressor candidate 3 | Mg2+ uptake/oligosaccharide transferase/N-glycosylation | ER | 9.3 | 10.2 | 10.2 | 1.8 | 1.8 |
| UPF3B | 10604078 | NS/S | UPF3 regulator of nonsense transcripts homolog B | mRNA nuclear export and surveillance | Nuc, Cyto | 7.9 | 8.1 | 8.0 | 1.1 | 1.1 |
| ZNF41/zfp27 56% | NS | Zinc finger protein 41 | Putative repressor of transcription | Nuc | ||||||
| ZNF674/zfp182 56% | 10603881 | NS | Zinc finger protein 674 | Putative repressor of transcription | Nuc | 6.9 | 7.5 | 7.2 | 1.5 | 1.2 |
| ZNF711/zfp711 98% | 10601492 | NS | Zinc finger protein 711 | Activator of transcription? | Nuc | 8.6 | 9.7 | 9.4 | 2.1 | 1.7 |
| ZNF81/zfp160 47.4% | 10442172 | NS | Zinc finger protein 81 | Repressor of transcription? | Nuc | 8.3 | 8.9 | 8.6 | 1.5 | 1.2 |
A dataset of genes expressed by immature mouse cortical neurons at E13.5 and E14.5 (.
EC, extracellular; ER, endoplasmic reticulum; Golgi, Golgi apparatus; Syn, synapse; PM, plasma membrane; Nuc, nucleus; Mito, mitochondria.
Figure 1Cellular events that contribute to cortical layer 6 formation and preplate splitting. (A) Distribution of Calretinin immunopositive preplate neurons prior to (left), during (middle), and after (right) preplate splitting. (B) A single confocal slice through the Eomes:eGFP cortex at the same regions as in (A), showing the distribution of GFP+ excitatory cortical neurons (green) and Calretinin+ preplate neurons (red) and Hoechst+ nuclei (blue). (C) Model of the corresponding cellular rearrangements during the mixed preplate stage, where L6 neurons are intermingled with preplate neurons, the preplate splitting stage, where L6 neurons become radially oriented and coalesce into a recognizable cellular layer and the cortical plate stage, where migrating neurons enter the CP on radial glial fibers. Abbreviations: marginal zone (MZ), preplate (PP), cortical plate (CP), subplate (SP), intermediate zone (IZ), ventricular zone (VZ). Scale bar is 25 μm in (A,B).