| Literature DB >> 25426283 |
S Hejr, M H Karimi, S Sabet, B Mohammadi, S Nikeghbalian, B Geramizadeh, R Yaghobi.
Abstract
BACKGROUND: Cytokines and co-stimulatory molecules are important factors determining the outcome of transplantation.Entities:
Keywords: Graft rejection; Interleukin-18; Liver transplantation; Polymorphism
Year: 2014 PMID: 25426283 PMCID: PMC4243046
Source DB: PubMed Journal: Int J Organ Transplant Med ISSN: 2008-6482
Demographic characteristics of liver transplant patient
| Characteristic | Rejected patients group, n (%) | Non rejected group group, n (%) |
|---|---|---|
| Gender | ||
| Male | 16 (54) | 54 (44) |
| Female | 12 (43) | 68 (56) |
| Type of transplant | ||
| Cadaver | 24 (86) | 109 (89) |
| Living | 4 (14) | 13 (11) |
| Age | 36.0±15.0 | 32.4±13.1 |
The primers, fragment size and restriction enzymes for the IL-18 and CD40
| Locus | Primers | Fragment sizes (bp) | Restriction enzymes |
|---|---|---|---|
| CD40-1C/T | Forward primer: GAAACTCCTGCGCGGTGAAT | CC133+74+85 | Sty1 |
| IL-18(G-656T) | Forward primer: AGGTCAGTCTTTGCTATCATTCCAGG | TT 120 | Mwo I |
The frequencies of CD40 and IL-18 genotypes and alleles in liver transplant patients with and without acute rejection
| SNP (rs) | Genotype | With acute rejection | Without acute rejection | p1 value (OR) | p2 value (OR) | p3 value (OR) | ||||
|---|---|---|---|---|---|---|---|---|---|---|
| Male n (%) | Female n (%) | Total n (%) | Male n (%) | Female n (%) | Total n (%) | |||||
| IL-18 (G-656T) (rs1946519) | TT | 4 (25) | 0 (0) | 4 (14) | 9 (16) | 14 (21) | 23 (18.9) | 0.45 (1.67) | 0.08 (0.00) | 0.57 (0.72) |
| TG | 10 (63) | 12 (100) | 22 (79) | 44 (39) | 47 (69) | 91 (74.6) | 0.38 (0.11) | 0.02 | 0.65 (1.25) | |
| GG | 2 (13) | 0 (0) | 2 (7) | 1 (44) | 7 (10) | 8 (6.6) | 0.64 (7.57) | 0.24 (0.00) | 0.91 (1.10) | |
| T allele | 18 (56) | 12 (50) | 30 (54) | 62 (36) | 75 (55) | 137 (56.1) | 0.90 (0.95) | 0.64 (0.81) | 0.72 (0.90) | |
| G allele | 14 (44) | 12 (50) | 26 (46) | 46 (64) | 61 (45) | 107 (43.9) | ||||
| CD40 (1C/T) (rs1883832) | TT | 2 (13) | 1 (8) | 3 (11) | 5 (9) | 8 (12) | 13 (10.7) | 0.70 (1.40) | 0.68 (0.72) | 0.99 (1.01) |
| TC | 10 (63) | 6 (50) | 16 (57) | 38 (70) | 43 (63) | 81 (66.4) | 0.55 (0.70) | 0.38 (0.58) | 0.35 (0.67) | |
| CC | 4 (25) | 5 (45) | 9 (32) | 11 (20) | 17 (25) | 28 (23.0) | 0.0.69 (1.30) | 0.23 (2.14) | 0.30 (1.59) | |
| T allele | 14 (44) | 8 (33) | 22 (39) | 48 (44) | 59 (43.4) | 107 (43.9) | 0.94 (0.97) | 0.35 (0.65) | 0.53 (0.83) | |
| C allele | 18 (56) | 16 (67) | 34 (61) | 60 (55.6) | 77 (56.6) | 137 (56.1) | ||||
p1 value indicates the difference between male patients with and without rejection.
p2 value indicates the difference between female patients with and without rejection.
p3 value indicates the difference between patients with and without rejection.
Considered significant with P-value threshold of 0.05. In genotypes, each P-value is the result of comparing corresponding row with the sum of other rows.ND:not defined" OR :Odd ratio
The frequencies of IL-18 and CD40 genotypes and alleles in liver transplant patients received allograft from living patients.
| SNP(rs) | Genotype | With Acute Rejection | Without Acute Rejection | p1 value (OR) | p2 value (OR) | p3 value (OR) | ||||
|---|---|---|---|---|---|---|---|---|---|---|
| Male n (%) | Female n (%) | Total n (%) | Male n (%) | Female n (%) | Total n (%) | |||||
| IL-18 | TT | 0 (0) | 0 (0) | 0 (0) | 2 (33) | 2 (29) | 4 (31) | 0.49 (0.00) | 0.30 (0.00) | 0.20 (0.00) |
| TG | 1 (100) | 3 (100) | 4 (100) | 4 (67) | 5 (71) | 9 (69) | 0.49 (0.00) | 0.30 (ND) | 0.20 (ND) | |
| GG | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | ||||
| T allele | 1 (50) | 3 (50) | 4 (50) | 8 (67) | 9 (64) | 17 (65) | 0.64 (0.50) | 0.55 (0.56) | 0.43 (0.53) | |
| G allele | 1 (50) | 3 (50) | 4 (50) | 4 (33) | 5 (36) | 9 (64) | ||||
| CD40 | TT | 0 (0) | 0 (0) | 0 (0) | 1 (17) | 1 (14) | 2 (16) | 0.65 (0.00) | 0.49 (0.00) | 0.40 (0.00) |
| TC | 0 (0) | 2 (67) | 2 (50) | 5 (83) | 4 (57) | 9 (69) | 0.08 (0.00) | 0.77 (1.50) | 0.48 (0.44) | |
| CC | 1 (100) | 1 (33) | 2 (50) | 0 (0) | 2 (29) | 2 (15) | 0.008* (ND) | 0.88 (1.25) | 0.15 (5.50) | |
| T allele | 0 | 2 (33) | 2 (25) | 7 (58) | 6 (46) | 13 (50) | 0.12 (0.00) | 0.69 (0.67) | 0.21 (0.33) | |
| C allele | 2 (100) | 4 (67) | 6 (75) | 5 (42) | 8 (57) | 13 (50) | ||||
The frequencies of IL-18 and CD40 genotypes and alleles in liver transplant patients received allograft from cadaver patients.
| SNP(rs) | Genotype | With Acute Rejection | Without Acute Rejection | p1 value | p2 value | p3 value | ||||
|---|---|---|---|---|---|---|---|---|---|---|
| Male n (%) | Female n (%) | Total n (%) | Male n (%) | Female n (%) | Total n (%) | |||||
| IL-18 (G-656T) (rs1946519) | TT | 4 (27) | 0 (0) | 4 (17) | 7 (15) | 12 (20) | 19 (17.4) | 0.28 (2.13) | 0.14 (0.00) | 0.92 (0.95) |
| TG | 9 (60) | 9 (100) | 18 (75) | 40 (83) | 42 (69) | 82 (75.2) | 0.05 | 0.04 | 0.98 (0.99) | |
| GG | 2 (13) | 0 (0) | 2 (8) | 1 (2) | 7 (11) | 8 (7.3) | 0.07 (7.23) | 0.28 (0.00) | 0.86 (1.15) | |
| T allele | 17 (57) | 9 (50) | 26 (54) | 54 (56) | 66 (54) | 120 (5.5) | 0.96 (1.02) | 0.74 (0.85) | 0.91 (0.97) | |
| G allele | 13 (43) | 9 (50) | 22 (46) | 42 (44) | 56 (46) | 98 (45.0) | ||||
| CD40 (1C/T) (rs1883832) | TT | 2 (13) | 1 (11) | 3 (13) | 4 (8) | 7 (11) | 11 (10.1) | 0.56 (1.69) | 0.97 (0.96) | 0.72 (1.27) |
| TC | 10 (67) | 4 (44) | 14 (58) | 33 (69) | 39 (64) | 72 (66.1) | 0.87 (0.91) | 0.26 (0.45) | 0.47 (0.72) | |
| CC | 3 (20) | 4 (44) | 7 (29) | 11 (23) | 15 (25) | 26 (23.9) | 0.81 (0.84) | 0.21 (2.45) | 0.58 (1.31) | |
| T allele | 14 (47) | 6 (33) | 20 (42) | 41 (43) | 53 (43.4) | 94 (43.1) | 0.70 (1.17) | 0.41 (0.65) | 0.85 (0.94) | |
| C allele | 16 (53) | 12 (67) | 28 (58) | 55 (57) | 69 (56.6) | 124 (56.9) | ||||
P1 value=indicate the difference between reject and non-reject group in male Cadaver patients.
P2value= indicate the difference between reject and non-reject group in Female Cadaver patients.
P3 value= indicate the difference between reject and non-reject group in Cadaver patients.
Considered significant with P-value threshold of 0.05. In genotypes, each P-value is the result of comparing corresponding row with the sum of other rows.ND:not defined" OR :Odd ratio