Literature DB >> 25425643

Molecular determinants of phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2) binding to transient receptor potential V1 (TRPV1) channels.

Horacio Poblete1, Ingrid Oyarzún2, Pablo Olivero3, Jeffrey Comer4, Matías Zuñiga5, Romina V Sepulveda6, David Báez-Nieto2, Carlos González Leon2, Fernando González-Nilo7, Ramón Latorre8.   

Abstract

Phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2) has been recognized as an important activator of certain transient receptor potential (TRP) channels. More specifically, TRPV1 is a pain receptor activated by a wide range of stimuli. However, whether or not PI(4,5)P2 is a TRPV1 agonist remains open to debate. Utilizing a combined approach of mutagenesis and molecular modeling, we identified a PI(4,5)P2 binding site located between the TRP box and the S4-S5 linker. At this site, PI(4,5)P2 interacts with the amino acid residues Arg-575 and Arg-579 in the S4-S5 linker and with Lys-694 in the TRP box. We confirmed that PI(4,5)P2 behaves as a channel agonist and found that Arg-575, Arg-579, and Lys-694 mutations to alanine reduce PI(4,5)P2 binding affinity. Additionally, in silico mutations R575A, R579A, and K694A showed that the reduction in binding affinity results from the delocalization of PI(4,5)P2 in the binding pocket. Molecular dynamics simulations indicate that PI(4,5)P2 binding induces conformational rearrangements of the structure formed by S6 and the TRP domain, which cause an opening of the lower TRPV1 channel gate.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Ion Channel; Molecular Docking; Molecular Dynamics; Multiscale Simulation; PI(4,5)P2; TRPV1; Transient Receptor Potential Channels (TRP Channels); electrophysiology

Mesh:

Substances:

Year:  2014        PMID: 25425643      PMCID: PMC4303662          DOI: 10.1074/jbc.M114.613620

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  44 in total

1.  Voltage sensor of Kv1.2: structural basis of electromechanical coupling.

Authors:  Stephen B Long; Ernest B Campbell; Roderick Mackinnon
Journal:  Science       Date:  2005-07-07       Impact factor: 47.728

2.  Cell biology. Tools to tamper with phosphoinositides.

Authors:  Stuart McLaughlin
Journal:  Science       Date:  2006-11-09       Impact factor: 47.728

3.  Vanilloid receptor-1 is essential for inflammatory thermal hyperalgesia.

Authors:  J B Davis; J Gray; M J Gunthorpe; J P Hatcher; P T Davey; P Overend; M H Harries; J Latcham; C Clapham; K Atkinson; S A Hughes; K Rance; E Grau; A J Harper; P L Pugh; D C Rogers; S Bingham; A Randall; S A Sheardown
Journal:  Nature       Date:  2000-05-11       Impact factor: 49.962

Review 4.  Phosphoinositide sensitivity of ion channels, a functional perspective.

Authors:  Nikita Gamper; Tibor Rohacs
Journal:  Subcell Biochem       Date:  2012

5.  Phosphatidylinositol 4,5-bisphosphate rescues TRPM4 channels from desensitization.

Authors:  Zheng Zhang; Haruhisa Okawa; Yuanyuan Wang; Emily R Liman
Journal:  J Biol Chem       Date:  2005-09-26       Impact factor: 5.157

6.  Functional recovery from desensitization of vanilloid receptor TRPV1 requires resynthesis of phosphatidylinositol 4,5-bisphosphate.

Authors:  Beiying Liu; Chunguang Zhang; Feng Qin
Journal:  J Neurosci       Date:  2005-05-11       Impact factor: 6.167

7.  Localization of the PIP2 sensor of TRPV1 ion channels.

Authors:  Carmen A Ufret-Vincenty; Rebecca M Klein; Li Hua; Juan Angueyra; Sharona E Gordon
Journal:  J Biol Chem       Date:  2011-01-11       Impact factor: 5.157

8.  The Ca2+-activated cation channel TRPM4 is regulated by phosphatidylinositol 4,5-biphosphate.

Authors:  Bernd Nilius; Frank Mahieu; Jean Prenen; Annelies Janssens; Grzegorz Owsianik; Rudi Vennekens; Thomas Voets
Journal:  EMBO J       Date:  2006-01-19       Impact factor: 11.598

9.  A modular PIP2 binding site as a determinant of capsaicin receptor sensitivity.

Authors:  Elizabeth D Prescott; David Julius
Journal:  Science       Date:  2003-05-23       Impact factor: 47.728

10.  Phosphoinositide 3-kinase binds to TRPV1 and mediates NGF-stimulated TRPV1 trafficking to the plasma membrane.

Authors:  Alexander T Stein; Carmen A Ufret-Vincenty; Li Hua; Luis F Santana; Sharona E Gordon
Journal:  J Gen Physiol       Date:  2006-11       Impact factor: 4.086

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  27 in total

1.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

Review 2.  Regulation of thermoTRPs by lipids.

Authors:  Sara L Morales-Lázaro; Luis Lemus; Tamara Rosenbaum
Journal:  Temperature (Austin)       Date:  2016-11-01

3.  PLCδ1 plays central roles in the osmotic activation of ΔN-TRPV1 channels in mouse supraoptic neurons and in murine osmoregulation.

Authors:  Sung Jin Park; Kirk Haan; Yoshikazu Nakamura; Kiyoko Fukami; Thomas E Fisher
Journal:  J Neurosci       Date:  2021-03-11       Impact factor: 6.167

Review 4.  Phosphoinositide regulation of TRPV1 revisited.

Authors:  Tibor Rohacs
Journal:  Pflugers Arch       Date:  2015-03-11       Impact factor: 3.657

Review 5.  Phosphoinositide signaling in somatosensory neurons.

Authors:  Tibor Rohacs
Journal:  Adv Biol Regul       Date:  2015-12-19

6.  Emerging Diversity in Lipid-Protein Interactions.

Authors:  Valentina Corradi; Besian I Sejdiu; Haydee Mesa-Galloso; Haleh Abdizadeh; Sergei Yu Noskov; Siewert J Marrink; D Peter Tieleman
Journal:  Chem Rev       Date:  2019-02-13       Impact factor: 60.622

Review 7.  TRP channels: a journey towards a molecular understanding of pain.

Authors:  Tamara Rosenbaum; Sara L Morales-Lázaro; León D Islas
Journal:  Nat Rev Neurosci       Date:  2022-07-13       Impact factor: 38.755

Review 8.  Molecular sensors and modulators of thermoreception.

Authors:  Xuming Zhang
Journal:  Channels (Austin)       Date:  2015       Impact factor: 2.581

9.  Methods to study phosphoinositide regulation of ion channels.

Authors:  Yevgen Yudin; Luyu Liu; Janhavi Nagwekar; Tibor Rohacs
Journal:  Methods Enzymol       Date:  2021-03-04       Impact factor: 1.682

Review 10.  TRPV1 Channel: A Potential Drug Target for Treating Epilepsy.

Authors:  Mustafa Nazıroğlu
Journal:  Curr Neuropharmacol       Date:  2015       Impact factor: 7.363

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