Literature DB >> 25418623

The whole chloroplast genome of shrub willows (Salix suchowensis).

Zhiqiang Wu1.   

Abstract

The whole chloroplast genome of Salix suchowensis was determined in this study using next generation sequencing data. The total genome size was 155,214 bp in length, containing a pair of inverted repeats (IRs) of 27,459 bp, which were separated by large single copy (LSC) and small single copy (SSC) of 84,077 bp and 16,219 bp, respectively. The overall GC contents of the chloroplast genome were 36.73%. One hundred and ten unique genes were annotated, including 76 protein coding genes, 30 tRNA genes and 4 rRNA genes. Among these, 18 are duplicated in the inverted repeat regions, 14 genes contained 1 intron, and 3 genes (rps12, clpP and ycf3) comprised of 2 introns.

Entities:  

Keywords:  Chloroplast genome; Salix; Salix suchowensis; next-generation sequencing

Mesh：

Substances：

Year:  2014        PMID： 25418623     DOI： 10.3109/19401736.2014.982602

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN： 2470-1394            Impact factor:   1.514


  8 in total

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Journal:  Plant Cell Rep       Date:  2017-10-30       Impact factor: 4.570

3.  Assembly and comparative analysis of complete mitochondrial genome sequence of an economic plant Salix suchowensis.

Authors:  Ning Ye; Xuelin Wang; Juan Li; Changwei Bi; Yiqing Xu; Dongyang Wu; Qiaolin Ye
Journal:  PeerJ       Date:  2017-03-29       Impact factor: 2.984

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Authors:  Sajjad Asaf; Muhammad Waqas; Abdul L Khan; Muhammad A Khan; Sang-Mo Kang; Qari M Imran; Raheem Shahzad; Saqib Bilal; Byung-Wook Yun; In-Jung Lee
Journal:  Front Plant Sci       Date:  2017-03-07       Impact factor: 5.753

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Authors:  Sajjad Asaf; Abdul Latif Khan; Abdur Rahim Khan; Muhammad Waqas; Sang-Mo Kang; Muhammad Aaqil Khan; Raheem Shahzad; Chang-Woo Seo; Jae-Ho Shin; In-Jung Lee
Journal:  PLoS One       Date:  2016-04-05       Impact factor: 3.240

7.  Complete Chloroplast Genome of Nicotiana otophora and its Comparison with Related Species.

Authors:  Sajjad Asaf; Abdul L Khan; Abdur R Khan; Muhammad Waqas; Sang-Mo Kang; Muhammad A Khan; Seok-Min Lee; In-Jung Lee
Journal:  Front Plant Sci       Date:  2016-06-14       Impact factor: 5.753

8.  The Complete Chloroplast Genome of Heimia myrtifolia and Comparative Analysis within Myrtales.

Authors:  Cuihua Gu; Bin Dong; Liang Xu; Luke R Tembrock; Shaoyu Zheng; Zhiqiang Wu
Journal:  Molecules       Date:  2018-04-08       Impact factor: 4.411
  8 in total

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