Literature DB >> 25418181

Only kinetics can prove conformational selection.

Jakob Dogan1, Per Jemth2.   

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Year:  2014        PMID： 25418181      PMCID： PMC4213663          DOI： 10.1016/j.bpj.2014.08.037

Source DB:  PubMed          Journal:  Biophys J        ISSN： 0006-3495            Impact factor:   4.033


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  14 in total

1.  Preformed structural elements feature in partner recognition by intrinsically unstructured proteins.

Authors:  Monika Fuxreiter; István Simon; Peter Friedrich; Peter Tompa
Journal:  J Mol Biol       Date:  2004-05-14       Impact factor: 5.469

2.  Multiparametric analysis of intrinsically disordered proteins: looking at intrinsic disorder through compound eyes.

Authors:  Vladimir N Uversky; A Keith Dunker
Journal:  Anal Chem       Date:  2012-01-19       Impact factor: 6.986

3.  Local conformational dynamics in alpha-helices measured by fast triplet transfer.

Authors:  Beat Fierz; Andreas Reiner; Thomas Kiefhaber
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-08       Impact factor: 11.205

4.  Structure of the transition state for the binding of c-Myb and KIX highlights an unexpected order for a disordered system.

Authors:  Rajanish Giri; Angela Morrone; Angelo Toto; Maurizio Brunori; Stefano Gianni
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-26       Impact factor: 11.205

5.  Conformational selection or induced fit: a flux description of reaction mechanism.

Authors:  Gordon G Hammes; Yu-Chu Chang; Terrence G Oas
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-30       Impact factor: 11.205

6.  Mapping backbone and side-chain interactions in the transition state of a coupled protein folding and binding reaction.

Authors:  Annett Bachmann; Dirk Wildemann; Florian Praetorius; Gunter Fischer; Thomas Kiefhaber
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-16       Impact factor: 11.205

Review 7.  Submillisecond kinetics of protein folding.

Authors:  W A Eaton; V Muñoz; P A Thompson; C K Chan; J Hofrichter
Journal:  Curr Opin Struct Biol       Date:  1997-02       Impact factor: 6.809

Review 8.  Distinguishing induced fit from conformational selection.

Authors:  Stefano Gianni; Jakob Dogan; Per Jemth
Journal:  Biophys Chem       Date:  2014-04-01       Impact factor: 2.352

9.  Ligand concentration regulates the pathways of coupled protein folding and binding.

Authors:  Kyle G Daniels; Nam K Tonthat; David R McClure; Yu-Chu Chang; Xin Liu; Maria A Schumacher; Carol A Fierke; Scott C Schmidler; Terrence G Oas
Journal:  J Am Chem Soc       Date:  2014-01-09       Impact factor: 15.419

10.  The transition state structure for coupled binding and folding of disordered protein domains.

Authors:  Jakob Dogan; Xin Mu; Åke Engström; Per Jemth
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379
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  7 in total

1.  Reply to: "Only kinetics can prove conformational selection".

Authors:  Alfonso De Simone
Journal:  Biophys J       Date:  2014-10-21       Impact factor: 4.033

2.  Kinetic Methods of Deducing Binding Mechanisms Involving Intrinsically Disordered Proteins.

Authors:  Elin Karlsson; Per Jemth
Journal:  Methods Mol Biol       Date:  2021

3.  Coupled Binding and Helix Formation Monitored by Synchrotron-Radiation Circular Dichroism.

Authors:  Elin Karlsson; Eva Andersson; Nykola C Jones; Søren Vrønning Hoffmann; Per Jemth; Magnus Kjaergaard
Journal:  Biophys J       Date:  2019-07-19       Impact factor: 4.033

Review 4.  Insights into Coupled Folding and Binding Mechanisms from Kinetic Studies.

Authors:  Sarah L Shammas; Michael D Crabtree; Liza Dahal; Basile I M Wicky; Jane Clarke
Journal:  J Biol Chem       Date:  2016-02-05       Impact factor: 5.157

5.  Understanding the mechanism of binding between Gab2 and the C terminal SH3 domain from Grb2.

Authors:  Angelo Toto; Daniela Bonetti; Alfonso De Simone; Stefano Gianni
Journal:  Oncotarget       Date:  2017-07-18

Review 6.  Binding Mechanisms of Intrinsically Disordered Proteins: Theory, Simulation, and Experiment.

Authors:  Luca Mollica; Luiza M Bessa; Xavier Hanoulle; Malene Ringkjøbing Jensen; Martin Blackledge; Robert Schneider
Journal:  Front Mol Biosci       Date:  2016-09-09

7.  pKID Binds to KIX via an Unstructured Transition State with Nonnative Interactions.

Authors:  Liza Dahal; Tristan O C Kwan; Sarah L Shammas; Jane Clarke
Journal:  Biophys J       Date:  2017-12-19       Impact factor: 4.033
  7 in total

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