Literature DB >> 2541429

Regulation of the function of eukaryotic DNA topoisomerase I: topological conditions for inactivity.

G Camilloni1, E Di Martino, E Di Mauro, M Caserta.   

Abstract

The effects of supercoiling on the cleavage reaction by eukaryotic DNA topoisomerases I (wheat germ, chicken erythrocyte, and calf thymus) have been analyzed on DNA fragments (0.96 and 2.3 kilobases) encompassing an immunoglobulin kappa light-chain promoter. In one topological condition of the substrate, the absolutely relaxed state, cleavage was found to be impeded. This finding defines the topology-dependent step of the eukaryotic DNA topoisomerase I reaction and shows that for the cleavage reaction topology is more critical than sequence effects. These findings suggest a simple model for the regulation of the DNA topoisomerase I reaction based on topological factors, which may explain the regulatory function of the enzyme in in vivo eukaryotic transcription.

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Year:  1989        PMID: 2541429      PMCID: PMC287068          DOI: 10.1073/pnas.86.9.3080

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  Action of nicking-closing enzyme on supercoiled and nonsupercoiled closed circular DNA: formation of a Boltzmann distribution of topological isomers.

Authors:  D E Pulleyblank; M Shure; D Tang; J Vinograd; H P Vosberg
Journal:  Proc Natl Acad Sci U S A       Date:  1975-11       Impact factor: 11.205

2.  Conformational fluctuations of DNA helix.

Authors:  D E Depew; J C Wang
Journal:  Proc Natl Acad Sci U S A       Date:  1975-11       Impact factor: 11.205

3.  Strand breakage by the DNA untwisting enzyme results in covalent attachment of the enzyme to DNA.

Authors:  J J Champoux
Journal:  Proc Natl Acad Sci U S A       Date:  1977-09       Impact factor: 11.205

4.  An activity from mammalian cells that untwists superhelical DNA--a possible swivel for DNA replication (polyoma-ethidium bromide-mouse-embryo cells-dye binding assay).

Authors:  J J Champoux; R Dulbecco
Journal:  Proc Natl Acad Sci U S A       Date:  1972-01       Impact factor: 11.205

5.  Early and late helix-coil transitions in closed circular DNA. The number of superhelical turns in polyoma DNA.

Authors:  J Vinograd; J Lebowitz; R Watson
Journal:  J Mol Biol       Date:  1968-04-14       Impact factor: 5.469

6.  Catastrophic variation of twist and writhing of circular DNAs with constraint?

Authors:  M Le Bret
Journal:  Biopolymers       Date:  1979-07       Impact factor: 2.505

7.  Mapping the topography of DNA wrapped around gyrase by nucleolytic and chemical probing of complexes of unique DNA sequences.

Authors:  K Kirkegaard; J C Wang
Journal:  Cell       Date:  1981-03       Impact factor: 41.582

8.  Recognition sites of eukaryotic DNA topoisomerase I: DNA nucleotide sequencing analysis of topo I cleavage sites on SV40 DNA.

Authors:  K A Edwards; B D Halligan; J L Davis; N L Nivera; L F Liu
Journal:  Nucleic Acids Res       Date:  1982-04-24       Impact factor: 16.971

9.  A mutant immunoglobulin light chain is formed by aberrant DNA- and RNA-splicing events.

Authors:  J G Seidman; P Leder
Journal:  Nature       Date:  1980-08-21       Impact factor: 49.962

10.  An omega protein from Drosophila melanogaster.

Authors:  W A Baase; J C Wang
Journal:  Biochemistry       Date:  1974-10-08       Impact factor: 3.162

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  15 in total

1.  Topoisomerase I is preferentially associated with normal SV40 replicative intermediates, but is associated with both replicating and nonreplicating SV40 DNAs which are deficient in histones.

Authors:  J J Champoux
Journal:  Nucleic Acids Res       Date:  1992-07-11       Impact factor: 16.971

2.  Potassium permanganate as an in situ probe for B-Z and Z-Z junctions.

Authors:  H Jiang; W Zacharias; S Amirhaeri
Journal:  Nucleic Acids Res       Date:  1991-12-25       Impact factor: 16.971

3.  Eukaryotic topoisomerase I-DNA interaction is stabilized by helix curvature.

Authors:  S Krogh; U H Mortensen; O Westergaard; B J Bonven
Journal:  Nucleic Acids Res       Date:  1991-03-25       Impact factor: 16.971

4.  In vitro preferential topoisomerization of bent DNA.

Authors:  M Caserta; A Amadei; E Di Mauro; G Camilloni
Journal:  Nucleic Acids Res       Date:  1989-11-11       Impact factor: 16.971

5.  Interaction of topoisomerase 1 with the transcribed region of the Drosophila HSP 70 heat shock gene.

Authors:  P E Kroeger; T C Rowe
Journal:  Nucleic Acids Res       Date:  1989-11-11       Impact factor: 16.971

6.  Topoisomerase I action on the heterochromatic DNA from the brine shrimp Artemia franciscana: studies in vivo and in vitro.

Authors:  D Carettoni; N Landsberger; E Zagni; R Benfante; G Badaracco
Journal:  Biochem J       Date:  1994-05-01       Impact factor: 3.857

7.  Eukaryotic topoisomerases recognize nucleic acid topology by preferentially interacting with DNA crossovers.

Authors:  E L Zechiedrich; N Osheroff
Journal:  EMBO J       Date:  1990-12       Impact factor: 11.598

8.  DNA topoisomerase I controls the kinetics of promoter activation and DNA topology in Saccharomyces cerevisiae.

Authors:  E Di Mauro; G Camilloni; L Verdone; M Caserta
Journal:  Mol Cell Biol       Date:  1993-11       Impact factor: 4.272

9.  Inhibition of DNA topoisomerase I activity by heparan sulfate and modulation by basic fibroblast growth factor.

Authors:  I Kovalszky; J Dudás; J Oláh-Nagy; G Pogány; J Töváry; J Timár; L Kopper; A Jeney; R V Iozzo
Journal:  Mol Cell Biochem       Date:  1998-06       Impact factor: 3.396

10.  Preferential binding of human topoisomerase I to superhelical DNA.

Authors:  K R Madden; L Stewart; J J Champoux
Journal:  EMBO J       Date:  1995-11-01       Impact factor: 11.598

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