| Literature DB >> 25408895 |
Karolina Furczyk1, Barbora Schutová1, Tanja M Michel1, Johannes Thome2, Andreas Büttner3.
Abstract
The neurobiology of suicidal behaviour, which constitutes one of the most serious problems both in psychiatry and general medical practice, still remains to a large degree unclear. As a result, scientists constantly look for new opportunities of explaining the causes underlying suicidality. In order to elucidate the biological changes occurring in the brains of the suicide victims, studies based on post-mortem brain tissue samples are increasingly being used. These studies employ different research methods to provide an insight into abnormalities in brain functioning on various levels, including gene and protein expression, neuroplasticity and neurotransmission, as well as many other areas. The aim of this paper to summarize the available data on the post-mortem studies, to provide an overview of main research directions and the most up-to-date findings, and to indicate the possibilities of further research in this field.Entities:
Keywords: Autopsy; Biological Psychiatry; Depression; Genetics; Hypothalamic-pituitary-adrenal (HPA) axis; Neural Plasticity; Neurotransmitter; Proteomics
Year: 2013 PMID: 25408895 PMCID: PMC4223890 DOI: 10.1186/2049-9256-1-2
Source DB: PubMed Journal: J Mol Psychiatry ISSN: 2049-9256
Genes possibly involved in suicide
| Gene symbol | Description | Change | Location | Diagnosis | Reference |
|---|---|---|---|---|---|
| A2M | alpha-2-macroglobulin | upregulation | PFC | SCH | 35 |
| ABCG2 | ATP-binding cassette, sub-family G(WHITE), member 2 | upregulation | PFC | aSCH | 35 |
| ADCY8 | adenylate cyclase 8 (brain) | upregulation | LS | MD | 27 |
| ADRA2A | adrenoceptor alpha 2A | higher frequency of the C1291G SNP | G | upregulated | 73, 115 |
| ADRA2B | adrenoceptor alpha 2B | higher frequency of the rs1018351 SNP | G | NC | 116 |
| AGT | angiotensinogen (serpin peptidase inhibitor, clade A, member 8) | downregulation | PFC | SCH | 35 |
| AGXT2L1 | alanine-glyoxylate aminotransferase 2-like 1 | downregulation | PFC | SCH | 35 |
| AHCYL1 | S-adenosylhomocysteine hydrolase-like 1 | downregulation | PFC | SCH | 35 |
| ALDH1L1 | aldehyde dehydrogenase 1 family, member L1 | downregulation | PFC | SCH | 35 |
| APLP2 | amyloid beta (A4) precursor-like protein 2 | upregulation | L | MD | 27 |
| APOE | Apolipoprotein E | downregulation | PFC | SCH | 35 |
| APOLD1 | apolipoprotein L domain containing 1 | downregulation | PFC | SCH | 35 |
| ATP1A2 | ATPase, Na+/K+ transporting, alpha 2 (+) polypeptide | downregulation | PFC | SCH | 35 |
| ATP1B2A | ATPase, Na+/K+ transporting, beta 2 polypeptide | downregulation | PFC | SCH | 35 |
| BACE1 | beta-site APP-cleaving enzyme 1 | upregulation | LS | MD | 27 |
| BBOX1 | butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 | downregulation | PFC | SCH | 35 |
| BDNF | brain-derived neurotrophic factor | downregulatoin | PFC, | HIP NC | 173, 174 |
| C3 | complement component 3 | upregulation | PFC | SCH | 35 |
| CD74 | CD74 molecule, major histocompatibility complex, class II invariant chain | upregulation | PFC | SCH | 35 |
| CDCA7L | cell division cycle associated 7-like | not characterised | PFC | NC | 34 |
| CDH12 | cadherin 12, type 2 (N-cadherin 2) | not characterised | PFC | NC | 34 |
| CHI3L1 | chitinase 3-like 1 (cartilage glycoprotein-39) | downregulation | PFC | BD | 35 |
| CLDN10 | claudin 10 | downregulation | PFC | SCH | 35 |
| COMT | catechol-O-methyltransferase | higher frequency of the val158met SNP | G | NC, | 125 |
| CRH | corticotropin releasing hormone | upregulation | PFC | SCH | 35 |
| CSF1R | colony stimulating factor 1 receptor | upregulation | PFCS | CH | 35 |
| CX3CR1 | chemokine (C-X3-C motif) receptor 1 | upregulation | PFC | SCH | 35 |
| DARPP-32 | protein phosphatase 1, regulatory (inhibitor) subunit 1B | downregulation | PFC | SCH | 128 |
| DDIT4 | DNA-damage-inducible transcript 4 | downregulation | PFC | SCH | 35 |
| DUSP6 | dual specificity phosphatase 6 | upregulation | PFC | SCH | 35 |
| EFEMP1 | EGF-containing fibulin-like extracellular matrix protein 1 | downregulation | PFC | SCH | 35 |
| EFEMP1 | EGF containing fibulin-like extracellular matrix protein 1 | not characterised | PFC | NC | 34 |
| EIF5A | eukaryotic translation initiation factor 5A | downregulation | PFC | SCH | 35 |
| EMX2 | empty spiracles homolog 2 (Drosophila) | downregulation | PFC | SCH | 34, 35 |
| EMX2 | empty spiracles homolog 2 (Drosophila) | downregulation | PFC | BD | 35 |
| EPHX1 | epoxide hydrolase 1, microsomal (xenobiotic) | downregulation | PFC | SCH | 35 |
| EVC | Ellis van Creveld syndrome | higher frequency of the rs1383180 polymorhism | G | NC, | 26 |
| FAM107A | family with sequence similarity 107, member A | downregulation | PFC | SCH | 35 |
| FGFR3 | fibroblast growth factor receptor 3 (achondroplasia, thanatophoric dwarfism) | downregulation | PFC | SCH | 35 |
| FXYD1 | FXYD domain containing ion transport regulator 1 (phospholemman) | downregulation | PFC | SCH | 35 |
| GABRA1 | gamma-aminobutyric acid (GABA) A receptor, alpha 1 | upregulation | LS | MD | 27 |
| GABRA5 | gamma-aminobutyric acid (GABA) A receptor, alpha 5 | upregulation | PFC | BD | 34, 35 |
| GABRB1 | gamma-aminobutyric acid (GABA) A receptor, beta 1 | upregulation | LS | MD | 27 |
| GLUL | glutamate-ammonia ligase (glutamine synthetase) | downregulation | PFC | SCH | 35 |
| HLA-DPA1 | major histocompatibility complex, class II, DP alpha 1 | upregulation | PFC | SCH | 35 |
| HLA-DRA | major histocompatibility complex, class II, DR alpha | upregulation | PFC | SCH | 35 |
| HSPB1 | heat shock 27 kDa protein 1 | downregulation | PFC | SCH | 35 |
| HTR2C | 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled | higher frequency of the Cys23Ser polymorhism | G | NC, | 84 |
| ID4 | inhibitor of DNA binding 4, dominant negative helix-loop-helix protein | downregulation | PFC | SCH | 36 |
| IL17RB | interleukin 17 receptor B | downregulation | PFC | SCH | 35 |
| ITGB4 | integrin, beta 4 | downregulation | PFC | SCH | 35 |
| ITPKB | inositol 1,4,5-trisphosphate 3-kinase B | downregulation | PFC | SCH | 35 |
| LAPTM5 | lysosomal associated multispanning membrane protein 5 | upregulation | PFC | SCH | 35 |
| LDLR | low density lipoprotein receptor | downregulation | PFC | BD | 35 |
| LOC645745 | metallothionein 1H-like protein | downregulation | PFC | SCH | 35 |
| lTrkB | neurotrophic tyrosine kinase, receptor, type 2 | downregulation | PFC, | HIP NC | 171 |
| METTL7A | methyltransferase like 7A | downregulation | PFC | SCH | 35 |
| MLC1 | megalencephalic leukoencephalopathy with subcortical cysts 1 | downregulation | PFC | SCH | 35 |
| MLC1 | megalencephalic leukoencephalopathy with subcortical cysts 1 | not characterised | PFC | NC | 34 |
| MT1E | metallothionein 1E (functional) | downregulation | PFC | SCH | 35 |
| MT1F | metallothionein 1F (functional) | downregulation | PFC | SCH | 35 |
| MT1G | metallothionein 1G | dcownregulation | PFC | SCH | 35 |
| MT1H | metallothionein 1H | downregulation | PFC | SCH | 35 |
| MT1M | metallothionein 1M | downregulation | PFC | SCH | 35 |
| MT1X | metallothionein 1X | downregulation | PFC | SCH | 35 |
| NAV2 | neuron navigator | downregulation | PFC | BD | 35 |
| NDRG2 | NDRG family member 2 | downregulation | PFC | SCH | 35 |
| NOTCH2 | Notch homolog 2 (Drosophila) | downregulation | PFC | SCH | 35 |
| NPY | neuropeptide Y | upregulation | PFC | SCH | 35 |
| NTRK2 | neurotrophic tyrosine kinase, receptor, type 2 | downregulation | PFC | SCH | 35 |
| NTSR2 | neurotensin receptor 2 | downregulation | PFC | SCH | 35 |
| P2RY13 | purinergic receptor P2Y, Gprotein coupled, 13 | upregulation | PFC | SCH | 35 |
| p75NTR (NGFR) | nerve growth factor receptor | higher frequency of the missense polymorphism (S205L) | G | MD | 23 |
| PCDHB5 | protocadherin beta 5 | NC | PFC | NC | 34 |
| PLSCR4 | phospholipid scramblase 4 | downregulation | PFC | SCH | 34, 35 |
| PLSCR4 | phospholipid scramblase 4 | downregulation | PFC | BD | 35 |
| PPAP2B | phosphatidic acid phosphatase type 2B | downregulation | PFC | SCH | 35 |
| PRKCI | protein kinase C, iota | upregulated | PFC | NC | 150 |
| PTPRR | protein tyrosine phosphatase, receptor type, R | downregulation | PFC | NC | 34 |
| RAB31 | RAB31, member RAS oncogene family | downregulation | PFC | SCH | 35 |
| RHOBTB34 | Rho-related BTB domain containing 3 | downregulation | PFC | SCH | 35 |
| S100A13 | S100 calcium binding protein A13 | not characterised | PFC | NC | 34 |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 | downregulation, higher frequency of the rs6526342 SNP | PFC | MD | 186, 187, 188, 189, 190, 192 |
| SCN2B | sodium channel, voltage-gated, type II, beta subunit | not characterised | PFC | NC | 34 |
| SDC2 | syndecan 2 (heparan sulfate proteoglycan 1, cell surfaceassociated, fibroglycan) | downregulation | PFC | SCH | 35 |
| SDC4 | syndecan 4 (amphiglycan, ryudocan) | downregulation | PFC | SCH | 35 |
| SLC14A1 | solute carrier family 14 (urea transporter), member 1 (Kidd blood group) | downregulation | PFC | SCH | 35 |
| SLC1A3 | solute carrier family 1 (glial high affinity glutamate transporter), member 3 | downregulation | PFC | SCH | 35 |
| SLC25A23 | solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 | upregulation | PFC | SCH | 35 |
| SLC4A4 | solute carrier family 4, sodium bicarbonate cotransporter, member 4 | downregulation | PFC | SCH | 35 |
| SLC6A3 | solute carrier family 6 (neurotransmitter transporter, dopamine), member 3 | higher frequency of the rs403636 SNP | G | NC | 116 |
| SLC7A11 | solute carrier family 7, (cationic amino acid transporter, y+system) member 11 | downregulation | PFC | SCH | 35 |
| SOX9 SRY | (sex determining region Y)-box 9 | downregulation | PFC | SCH | 35 |
| SPON1 | spondin 1, extracellular matrix protein | downregulation | PFC | SCH | 35 |
| STCH | stress 70 protein chaperone, microsome-associated, 60 kDa | upregulation | PFC | BD | 35 |
| SYT4 | synaptotagmin IV upregulation LS MD 27 TIMP1 TIMP metallopeptidase inhibitor 1 | downregulation | PFC | BD | 35 |
| TM4SF1 | transmembrane 4 L six family member 1 | downregulation | PFC | BD | 35 |
| TNFSF10 | tumor necrosis factor (ligand) superfamily, member 10 | upregulation | PFC | SCH | 35 |
| TP53BP2 | tumor protein p53 binding protein, 2 | downregulation | PFC | SCH | 35 |
| TPD52L1 | tumor protein D52-like 1 | downregulation | PFC | SCH | 35 |
| TPH2 | tryptophan hydroxylase 2 | higher frequeny of the rs1386494 SNP | G | NC | 88 |
| TRIM23 | tripartite motif-containing 23 | upregulation | PFC | BD | 35 |
| TUBB2B | tubulin, beta 2B | downregulation | PFC | SCH | 35 |
| TYROBP | TYRO protein tyrosine kinase binding protein | upregulation | PFC | SCH | 35 |
| VIL2 | villin 2 (ezrin) | downregulation | PFCS | CH | 35 |
| WFS1 | Wolfram syndrome 1 (wolframin) | higher frequency of the 611R/611R genotype | G | NC | 21, 22 |
| ZFP36 | ZFP36 ring finger protein | not characterised | PFC | NC | 34 |
| ZHX2 | zinc fingers and homeoboxes 2 | downregulation | PFC | BD | 35 |
| ZIC1 | Zic family member 1 (odd-paired homolog, Drosophila) | downregulation | PFC | BD | 35 |
Neurotransmitter systems and suicide
| System element | Change | Location | ||
|---|---|---|---|---|
| SEROTONERGIC | Receptors | 5HT-1A | upregulated | RN, FC |
| 5HT-1D | downregulated | PFC | ||
| 5HT-2A | downregulated | PFC, HIP, FPC | ||
| 5HT-2C | upregulated | PFC | ||
| 5-HT4 | upregulated | FC, HIP, CN, AN | ||
| Enzymes | TPH | upregulated | RN | |
| Transporter | Serotonin transporter | downregulated | PFC, RN | |
| NORADRENERGIC | Receptors | Alpha-1 | downregulated | PFC, TC, CN |
| Alpha-2 | upregulated in drug-free subjects | HIP, FC, LC, HTH | ||
| downregulated in antidepressant- treated subjects | OC, HIP | |||
| Alpha-2A | upregulated in drug-free subjects | EC, HTH, PEE | ||
| downregulated in antidepressanttreated subjects | AN, CN | |||
| Beta | upregulated | PFC, TC | ||
| Alpha-2 ‘Beta ratio | increased | G | ||
| Enzymes | TH | upregulated | LC | |
| DOPAMINERGIC | Dopamine turnover | Dihydroxy- phenylacetic acid concentration | decreased | CN, P. NA |
| GLUTAMATERGIC | Receptors | NMDA | downregulated | G |
| Zinc inhibition decreased | HIP | |||
| AMPA | upregulated | CN | ||
| GABA-ERGIC | Receptors | GABA | upregulated | FC |
| ENDOCANNABINOID | Receptors | CB(1) | upregulated | PFC |
Cell-signalling in suicide
| System element | Change | Location | ||
|---|---|---|---|---|
| Adenylate cyclase | Protein kinase A | Enzyme activity | decreased | PFC, HIP |
| Enzyme subunits RIl, C3 levels | decreased | PFC, | ||
| Enzyme subunits Rkt, R113 levels | decreased | PFC, | ||
| Enzyme substrate Rap- 1 | reduced activation | PFC, HIP | ||
| Second messenger | cAMP level | increased | PC, CN | |
| cAMP effector | Epac-2 level | increased | PFC, HIP | |
| CREB level | decreased | PFC, HIP | ||
| increased | PFC, | |||
| increased density of CREB stained cells | AN | |||
| Phospholipase C | Protein kinase C | Enzyme activity | decreased | PFC, HIP, |
| Enzyme substrate MARCKS | increased concentration, decreased phosphorylation | PFC, HIP | ||
| Second messenger | IP3 level | increased | HIP, CN | |
| Cytokines | Interleukins | IL-1β level | increased | FC, teenage suicide |
| IL-3 level | increased | PC, | ||
| IL-4 level | increased | FC, | ||
| IL-6 level | increased | PC, teenage suicide | ||
| IL-13 level | increased | PC, | ||
| TNF-Family | TNF-α level | increased | PC, teenage suicide | |
Changes in neural plasticity in suicide
| System element | Change | Location | ||
|---|---|---|---|---|
| Neurotrophic factors | Neurotrophins | BDNF level | decreased | PFC, HIP, |
| NT-3 level | decreased | PFC, HIP, | ||
| BDNF-binding receptor | TrkB receptor concentration | decreased | PFC, HIP | |
| TrkB.T1 truncated form receptor concentration | decreased | PFC | ||
| Polyamins | Putrescine levels | increased | G | |
| Spermidine levels | increased | G | ||
HPA axis in suicide
| System element | Change | Location | ||
|---|---|---|---|---|
| Hormones | CRH levels | increased | LC, DLPFC, FPC, VMPFC, CN | |
| decreased | DVC | |||
| POMC mRNA level | increased | aPIT | ||
| Receptors | CRH-receptors | receptor density | decreased | FC |
| CRH1-receptor mRNA level | decreased | G | CRH1-receptor mRNA level | |
| CRH1/CRH2receptor ratio | decreased | PIT | CRH1/CRH2receptor ratio | |