Literature DB >> 25407767

Membrane protein mobility depends on the length of extra-membrane domains and on the protein concentration.

Gernot Guigas1, Matthias Weiss.   

Abstract

Diffusion of membrane proteins is not only determined by the membrane anchor friction but also by the overall concentration of proteins and the length of their extra-membrane domains. We have studied the influence of the latter two cues by mesoscopic simulations. As a result, we have found that the total friction of membrane proteins, γ, increases approximately linearly with the length of the extra-membrane domain, L, whereas a slightly nonlinear dependence on the total protein concentration, ϕ was observed. We provide an educated guess for the functional form of γ(L, ϕ) and the associated diffusion coefficient. This expression not only matches our simulation data but it is also in favorable agreement with previously published experimental data. Our findings indicate that diffusion coefficients of membrane proteins are not solely determined by the friction of membrane anchors but also extra-membrane domains and the crowdedness of the membrane need to be considered to obtain a comprehensive view of protein diffusion on cellular membranes.

Mesh:

Substances:

Year:  2015        PMID: 25407767     DOI: 10.1039/c4sm01846j

Source DB:  PubMed          Journal:  Soft Matter        ISSN: 1744-683X            Impact factor:   3.679


  3 in total

1.  Efficient Schmidt number scaling in dissipative particle dynamics.

Authors:  Ryan C Krafnick; Angel E García
Journal:  J Chem Phys       Date:  2015-12-28       Impact factor: 3.488

Review 2.  Computational Modeling of Realistic Cell Membranes.

Authors:  Siewert J Marrink; Valentina Corradi; Paulo C T Souza; Helgi I Ingólfsson; D Peter Tieleman; Mark S P Sansom
Journal:  Chem Rev       Date:  2019-01-09       Impact factor: 72.087

3.  Challenges for Super-Resolution Localization Microscopy and Biomolecular Fluorescent Nano-Probing in Cancer Research.

Authors:  Michael Hausmann; Nataša Ilić; Götz Pilarczyk; Jin-Ho Lee; Abiramy Logeswaran; Aurora Paola Borroni; Matthias Krufczik; Franziska Theda; Nadine Waltrich; Felix Bestvater; Georg Hildenbrand; Christoph Cremer; Michael Blank
Journal:  Int J Mol Sci       Date:  2017-09-28       Impact factor: 5.923

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.