Literature DB >> 25407587

Molecular modeling and in vitro reactivation study between the oxime BI-6 and acetylcholinesterase inhibited by different nerve agents.

Juliana O S Giacoppo1, Tanos C C França, Kamil Kuča, Elaine F F da Cunha, Ruben Abagyan, Daiana T Mancini, Teodorico C Ramalho.   

Abstract

Nerve agents are organophosphates acting as potent inhibitors of acetylcholinesterase (AChE), the enzyme responsible for the hydrolysis of acetylcholine and, consequently, the termination of the transmission of nerve impulses. The inhibition of AChE by an organophosphate can be reversed by a nucleophilic agent able to dephosphorylate a serine residue in the active site of AChE. In this sense, the oximes are compounds capable of removing the nerve agent and reactivate the enzyme. Here, we have applied a methodology involving theoretical docking and Quantum Mechanics/Molecular Mechanics, using the softwares Molegro(®) and Spartan(®), to evaluate the kinetic constants of reactivation and the interactions of the oxime BI-6 with AChE inhibited by different organophosphorus compounds in comparison to in vitro data. Results confirm that this method is suitable for the prediction of kinetic and thermodynamic parameters of oximes, which may be useful in the design and selection of new and more effective oximes.

Entities:  

Keywords:  QM/MM; acetylcholinesterase; chemical warfare; molecular docking; organophosphates; oximes

Mesh:

Substances:

Year:  2014        PMID: 25407587     DOI: 10.1080/07391102.2014.989408

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  10 in total

1.  Interactions of cantharidin-like inhibitors with human protein phosphatase-5 in a Mg2+ system: molecular dynamics and quantum calculations.

Authors:  Letícia C Assis; Alexandre A de Castro; Ingrid G Prandi; Daiana T Mancini; Juliana O S de Giacoppo; Ranylson M L Savedra; Tamiris M de Assis; Juliano B Carregal; Elaine F F da Cunha; Teodorico Castro Ramalho
Journal:  J Mol Model       Date:  2018-10-02       Impact factor: 1.810

2.  Probing the origins of human acetylcholinesterase inhibition via QSAR modeling and molecular docking.

Authors:  Saw Simeon; Nuttapat Anuwongcharoen; Watshara Shoombuatong; Aijaz Ahmad Malik; Virapong Prachayasittikul; Jarl E S Wikberg; Chanin Nantasenamat
Journal:  PeerJ       Date:  2016-08-09       Impact factor: 2.984

3.  A newly developed oxime K203 is the most effective reactivator of tabun-inhibited acetylcholinesterase.

Authors:  Kamil Kuca; Kamil Musilek; Daniel Jun; Jana Zdarova-Karasova; Eugenie Nepovimova; Ondrej Soukup; Martina Hrabinova; John Mikler; Tanos C C Franca; Elaine F F Da Cunha; Alexandre A De Castro; Martin Valis; Teodorico C Ramalho
Journal:  BMC Pharmacol Toxicol       Date:  2018-02-21       Impact factor: 2.483

Review 4.  Future Therapeutic Perspectives into the Alzheimer's Disease Targeting the Oxidative Stress Hypothesis.

Authors:  Jéssika P Teixeira; Alexandre A de Castro; Flávia V Soares; Elaine F F da Cunha; Teodorico C Ramalho
Journal:  Molecules       Date:  2019-12-03       Impact factor: 4.411

5.  Synthesis, in vitro screening and molecular docking of isoquinolinium-5-carbaldoximes as acetylcholinesterase and butyrylcholinesterase reactivators.

Authors:  David Malinak; Rafael Dolezal; Vendula Hepnarova; Miroslava Hozova; Rudolf Andrys; Petr Bzonek; Veronika Racakova; Jan Korabecny; Lukas Gorecki; Eva Mezeiova; Miroslav Psotka; Daniel Jun; Kamil Kuca; Kamil Musilek
Journal:  J Enzyme Inhib Med Chem       Date:  2020-12       Impact factor: 5.051

Review 6.  A Comprehensive Review of Cholinesterase Modeling and Simulation.

Authors:  Danna De Boer; Nguyet Nguyen; Jia Mao; Jessica Moore; Eric J Sorin
Journal:  Biomolecules       Date:  2021-04-15

7.  Theoretical Studies Applied to the Evaluation of the DFPase Bioremediation Potential against Chemical Warfare Agents Intoxication.

Authors:  Flávia V Soares; Alexandre A de Castro; Ander F Pereira; Daniel H S Leal; Daiana T Mancini; Ondrej Krejcar; Teodorico C Ramalho; Elaine F F da Cunha; Kamil Kuca
Journal:  Int J Mol Sci       Date:  2018-04-23       Impact factor: 5.923

Review 8.  Trends in the Recent Patent Literature on Cholinesterase Reactivators (2016-2019).

Authors:  Alexandre A de Castro; Letícia C Assis; Flávia V Soares; Kamil Kuca; Daniel A Polisel; Elaine F F da Cunha; Teodorico C Ramalho
Journal:  Biomolecules       Date:  2020-03-12

9.  Understanding the Interaction Modes and Reactivity of Trimedoxime toward MmAChE Inhibited by Nerve Agents: Theoretical and Experimental Aspects.

Authors:  Alexandre A de Castro; Daniel A Polisel; Bruna T L Pereira; Elaine F F da Cunha; Kamil Kuca; Eugenie Nepovimova; Teodorico C Ramalho
Journal:  Int J Mol Sci       Date:  2020-09-05       Impact factor: 5.923

10.  New Estrone Oxime Derivatives: Synthesis, Cytotoxic Evaluation and Docking Studies.

Authors:  Catarina Canário; Mariana Matias; Vanessa Brito; Adriana O Santos; Amílcar Falcão; Samuel Silvestre; Gilberto Alves
Journal:  Molecules       Date:  2021-05-04       Impact factor: 4.411

  10 in total

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