| Literature DB >> 25404070 |
Harry M Savage, Jeremy P Ledermann, Laurence Yug, Kristen L Burkhalter, Maria Marfel, W Thane Hancock.
Abstract
Two species of Aedes (Stegomyia) were collected in response to the first chikungunya virus (CHIKV) outbreak on Yap Island: the native species Ae. hensilli Farner and the introduced species Ae. aegypti (L.). Fourteen CHIKV-positive mosquito pools were detected. Six pools were composed of female Ae. hensilli, six pools were composed of female Ae. aegypti, one pool was composed of male Ae. hensilli, and one pool contained female specimens identified as Ae. (Stg.) spp. Infection rates were not significantly different between female Ae. hensilli and Ae. aegypti. The occurrence of human cases in all areas of Yap Island and the greater number of sites that yielded virus from Ae. hensilli combined with the ubiquitous distribution of this species incriminate Ae. hensilli as the most important vector of CHIKV during the outbreak. Phylogenic analysis shows that virus strains on Yap are members of the Asia lineage and closely related to strains currently circulating in the Caribbean. © The American Society of Tropical Medicine and Hygiene.Entities:
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Year: 2014 PMID: 25404070 PMCID: PMC4347352 DOI: 10.4269/ajtmh.14-0374
Source DB: PubMed Journal: Am J Trop Med Hyg ISSN: 0002-9637 Impact factor: 2.345
Figure 1.Map of Yap Island with 10 municipalities and 14 entomological collection sites labeled. Inset shows the location of Yap Island within the FSM and the location of Palau.
Number (percentage) of adult mosquito taxa collected with BG-Sentinel traps and aspirators on Yap during an outbreak of CHIKV (November 13–18, 2013)
| Taxa | Female, | Male, | Total, |
|---|---|---|---|
| 7 (1.0) | 7 (0.4) | ||
| 2 (0.3) | 1 (0.1) | 3 (0.2) | |
| 93 (13.3) | 100 (10.4) | 193 (11.6) | |
| 183 (26.2) | 304 (31.6) | 487 (29.3) | |
| 7 (1.0) | 7 (0.4) | ||
| 405 (58.0) | 557 (57.9) | 962 (58.0) | |
| 1 (0.1) | 1 (< 0.1) | ||
| Total | 698 (42.0) | 962 (58.0) | 1,660 |
Information on CHIKV-positive mosquito pools by real-time RT-PCR collected on Yap during an epidemic (November of 2013)
| Site number | Municipality | Collection date | Collection method | Species | Sex | Pool composition | Pool number | GenBank accession | |
|---|---|---|---|---|---|---|---|---|---|
| Engorged | Depleted | ||||||||
| 13-2 | Tomil | November 14 | BG trap | Female | 0 | 14 | YAP-13-2055 | ||
| 13-2 | Tomil | November 15 | BG trap | Female | 0 | 8 | YAP-13-2081 | ||
| 13-2 | Tomil | November 16 | BG trap | Female | 0 | 12 | YAP-13-2107 | ||
| 13-3 | Weloy (Colonia) | November 13 | BG trap | Female | 0 | 3 | YAP-13-2018 | ||
| 13-6 | Rull | November 14 | BG trap | Female | 0 | 2 | YAP-13-2024 | ||
| 13-7 | Rull | November 17 | BG trap | Male | 0 | 4 | YAP-13-2147 | ||
| 13-7 | Rull | November 17 | BG trap | Female | 0 | 6 | YAP-13-2148 | KJ689453 | |
| 13-7 | Rull | November 17 | BG trap | Female | 0 | 1 | YAP-13-2149 | ||
| 13-7 | Rull | November 18 | BG trap | Female | 0 | 12 | YAP-13-2193 | ||
| 13-9 | Rull | November 14 | BG trap | Female | 1 | 0 | YAP-13-2039 | KJ689452 | |
| 13-9 | Rull | November 15 | Aspirator | Female | 5 | 0 | YAP-13-2096 | ||
| 13-9 | Rull | November 16 | BG trap | Female | 0 | 7 | YAP-13-2130 | ||
| 13-9 | Rull | November 17 | Aspirator | Female | 2 | 0 | YAP-13-2169 | ||
| 13-9 | Rull | November 17 | Aspirator | Female | 0 | 7 | YAP-13-2170 | ||
Thirteen mosquito pools yielded viable virus.
All positive sites were suspect case-patient residences except site 13-3, which was the Division of Public Safety (Police Department and jail).
Figure 2.Phylogenic relationship of the mosquito isolates (accession numbers KJ689452 and KJ689453) with 31 representatives of other CHIKV with three major lineages of viruses labeled: Asian, ECSA, and WA. Trees were generated by aligning the available full-length sequences using the maximum likelihood method and the Tamura–Nei model. Bootstrap values were determined using 1,000 replicates, and values are provided at each node. Gaps in the alignment were analyzed by partial deletion, which resulted in 11,244 positions in the final dataset. Accession numbers are listed for each strain.
Genome differences observed between the CHIKV isolates from Yap in 2013.
| Nucleotide location | ||||
|---|---|---|---|---|
| Strain | 764 (nsP1) | 4,365 (nsP3) | 4,540 (nsP3) | 5,302 (nsP3) |
| R | C | T | R | |
| R | C | T | A | |
| Human 13-3807 | G | C | C | A |
| Human 13-3462 | G | T | T | A |
| Amino acid change | Gly→Arg | Thr→Ile | Silent | Ile→Met |
From the start of the genome.
A or G.