Literature DB >> 25403323

W246(6.48) opens a gate for a continuous intrinsic water pathway during activation of the adenosine A2A receptor.

Shuguang Yuan1, Zhenquan Hu, Slawomir Filipek, Horst Vogel.   

Abstract

The question how G-protein-coupled receptors transduce an extracellular signal by a sequence of transmembrane conformational transitions into an intracellular response remains to be solved at molecular detail. Herein, we use molecular dynamics simulations to reveal distinct conformational transitions of the adenosine A2A receptor, and we found that the conserved W246(6.48) residue in transmembrane helix TM6 performs a key rotamer toggle switch. Agonist binding induces the sidechain of W246(6.48) to fluctuate between two distinct conformations enabling the diffusion of water molecules from the bulk into the center of the receptor. After passing the W246(6.48) gate, the internal water molecules induce another conserved residue, Y288(7.53), to switch to a distinct rotamer conformation establishing a continuous transmembrane water pathway. Further, structural changes of TM6 and TM7 induce local structural changes of the adjacent lipid bilayer.
© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  G-protein-coupled receptor; molecular dynamics simulations; molecular switches; signal transduction; water channel

Mesh:

Substances:

Year:  2014        PMID: 25403323     DOI: 10.1002/anie.201409679

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  27 in total

1.  G protein-coupled receptors of class A harness the energy of membrane potential to increase their sensitivity and selectivity.

Authors:  Daria N Shalaeva; Dmitry A Cherepanov; Michael Y Galperin; Gert Vriend; Armen Y Mulkidjanian
Journal:  Biochim Biophys Acta Biomembr       Date:  2019-08-23       Impact factor: 3.747

Review 2.  Designing Safer Analgesics via μ-Opioid Receptor Pathways.

Authors:  H C Stephen Chan; Dillon McCarthy; Jianing Li; Krzysztof Palczewski; Shuguang Yuan
Journal:  Trends Pharmacol Sci       Date:  2017-09-19       Impact factor: 14.819

3.  Activation mechanisms of the first sphingosine-1-phosphate receptor.

Authors:  Alisha D Caliman; Yinglong Miao; J Andrew McCammon
Journal:  Protein Sci       Date:  2017-04-12       Impact factor: 6.725

4.  Ultraslow Water-Mediated Transmembrane Interactions Regulate the Activation of A2A Adenosine Receptor.

Authors:  Yoonji Lee; Songmi Kim; Sun Choi; Changbong Hyeon
Journal:  Biophys J       Date:  2016-09-20       Impact factor: 4.033

5.  A3 adenosine receptor activation mechanisms: molecular dynamics analysis of inactive, active, and fully active states.

Authors:  Antonella Ciancetta; Priscila Rubio; David I Lieberman; Kenneth A Jacobson
Journal:  J Comput Aided Mol Des       Date:  2019-11-22       Impact factor: 3.686

6.  Enhancing Structure Prediction and Design of Soluble and Membrane Proteins with Explicit Solvent-Protein Interactions.

Authors:  Jason K Lai; Joaquin Ambia; Yumeng Wang; Patrick Barth
Journal:  Structure       Date:  2017-09-28       Impact factor: 5.006

Review 7.  Molecular Simulations and Drug Discovery of Adenosine Receptors.

Authors:  Jinan Wang; Apurba Bhattarai; Hung N Do; Sana Akhter; Yinglong Miao
Journal:  Molecules       Date:  2022-03-22       Impact factor: 4.411

8.  Sequence, structure and ligand binding evolution of rhodopsin-like G protein-coupled receptors: a crystal structure-based phylogenetic analysis.

Authors:  Steffen Wolf; Stefan Grünewald
Journal:  PLoS One       Date:  2015-04-16       Impact factor: 3.240

9.  Mapping the allosteric sites of the A2A adenosine receptor.

Authors:  Alisha D Caliman; Yinglong Miao; James A McCammon
Journal:  Chem Biol Drug Des       Date:  2017-07-19       Impact factor: 2.817

10.  Exchanging ligand-binding specificity between a pair of mouse olfactory receptor paralogs reveals odorant recognition principles.

Authors:  Olivia Baud; Shuguang Yuan; Luc Veya; Slawomir Filipek; Horst Vogel; Horst Pick
Journal:  Sci Rep       Date:  2015-10-09       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.