| Literature DB >> 25400628 |
Souichiro Kato1, Rina Yoshida2, Takashi Yamaguchi2, Tomoyuki Sato3, Isao Yumoto3, Yoichi Kamagata4.
Abstract
Investigation of microbial interspecies interactions is essential for elucidating the function and stability of microbial ecosystems. However, community-based analyses including molecular-fingerprinting methods have limitations for precise understanding of interspecies interactions. Construction of model microbial consortia consisting of defined mixed cultures of isolated microorganisms is an excellent method for research on interspecies interactions. In this study, a model microbial consortium consisting of microorganisms that convert acetate into methane directly (Methanosaeta thermophila) and syntrophically (Thermacetogenium phaeum and Methanothermobacter thermautotrophicus) was constructed and the effects of elevated CO2 concentrations on intermicrobial competition were investigated. Analyses on the community dynamics by quantitative RT-PCR and fluorescent in situ hybridization targeting their 16S rRNAs revealed that high concentrations of CO2 have suppressive effects on the syntrophic microorganisms, but not on the aceticlastic methanogen. The pathways were further characterized by determining the Gibbs free energy changes (ΔG) of the metabolic reactions conducted by each microorganism under different CO2 concentrations. The ΔG value of the acetate oxidation reaction (T. phaeum) under high CO2 conditions became significantly higher than -20 kJ per mol of acetate, which is the borderline level for sustaining microbial growth. These results suggest that high concentrations of CO2 undermine energy acquisition of T. phaeum, resulting in dominance of the aceticlastic methanogen. This study demonstrates that investigation on model microbial consortia is useful for untangling microbial interspecies interactions, including competition among microorganisms occupying the same trophic niche in complex microbial ecosystems.Entities:
Keywords: CO2 concentration; acetate; methanogenesis; model consortia; thermodynamics
Year: 2014 PMID: 25400628 PMCID: PMC4214200 DOI: 10.3389/fmicb.2014.00575
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 5.640
Media with different initial [ΣCO] used in this study.
| [ΣCO2]initial (mmol l-1) | NaHCO3 added (mM) | Partial pressure of the gas phase CO2 (atm) | Calculated [ |
|---|---|---|---|
| 5.0 | 5 | 0 | 0.8 |
| 50.7 | 35 | 0.2 | 8.1 |
| 113.4 | 35 | 1 | 18.1 |
Quantitative RT-PCR (qRT-PCR) primers designed and used in this study.
| Primer name | Sequence (5′–3′) | Target |
|---|---|---|
| PT387f | GATAAGGGGACCTCGAGTGCT | |
| PT573r | GGCCGGCTACAGACCCT | |
| PB486f | ACGGGACGAAGGGAGTGACGG | |
| PB646r | CTCCTCCCCTCAAGTCATCCAGT | |
| TM1139f | TTACCAGCGGAACCCTTATGG | |
| TM1275r | ACCTGGTTTAGGGGATTACCTCC |
The metabolic reactions and the respective standard Gibbs free energy changes (ΔG∘’) of the microorganisms utilized in this study.
| Microbial species | Metabolic reactions | ΔG∘′ (kJ mol-1)a |
|---|---|---|
| CH3COO- + H2O → CH4 + | -31.0 | |
| CH3COO- + 4H2O → 2 | +104.6 | |
| 4H2 + | -135.6 |