Literature DB >> 2540029

NMR study of the alkaline isomerization of ferricytochrome c.

X L Hong1, D W Dixon.   

Abstract

The pH-induced isomerization of horse heart cytochrome c has been studied by 1H NMR. We find that the transition occurring in D2O with a pKa measured as 9.5 +/- 0.1 is from the native species to a mixture of two basic forms which have very similar NMR spectra. The heme methyl peaks of these two forms have been assigned by 2D exchange NMR. The forward rate constant (native to alkaline cytochrome c) has a value of 4.0 +/- 0.6 s-1 at 27 degrees C and is independent of pH; the reverse rate constant is pH-dependent. The activation parameters are delta H not equal to = 12.8 +/- 0.8 kcal.mol1, delta S not equal to = -12.9 +/- 2.0 e.u. for the forward reaction and delta H not equal to = 6.0 +/- 0.3 kcal.mol-1, delta S not equal to = -35.1 +/- 1.3 e.u. for the reverse reaction (pH* = 9.28). delta H degree and delta S degree for the isomerization are 6.7 +/- 0.6 kcal.mol-1 and 21.9 +/- 1.0 e.u., respectively.

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Year:  1989        PMID: 2540029     DOI: 10.1016/0014-5793(89)80262-5

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  19 in total

1.  NMR investigation of ferricytochrome c unfolding: detection of an equilibrium unfolding intermediate and residual structure in the denatured state.

Authors:  B S Russell; R Melenkivitz; K L Bren
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-18       Impact factor: 11.205

2.  Resolving the individual components of a pH-induced conformational change.

Authors:  C Blouin; J G Guillemette; C J Wallace
Journal:  Biophys J       Date:  2001-10       Impact factor: 4.033

3.  Conformational stability and dynamics of cytochrome c affect its alkaline isomerization.

Authors:  Natasa Tomásková; Rastislav Varhac; Gabriel Zoldák; Lenka Oleksáková; Dagmar Sedláková; Erik Sedlák
Journal:  J Biol Inorg Chem       Date:  2006-10-31       Impact factor: 3.358

4.  Tyrosine phosphorylation turns alkaline transition into a biologically relevant process and makes human cytochrome c behave as an anti-apoptotic switch.

Authors:  José M García-Heredia; Antonio Díaz-Quintana; Maria Salzano; Mar Orzáez; Enrique Pérez-Payá; Miguel Teixeira; Miguel A De la Rosa; Irene Díaz-Moreno
Journal:  J Biol Inorg Chem       Date:  2011-06-25       Impact factor: 3.358

Review 5.  The folding energy landscape and free energy excitations of cytochrome c.

Authors:  Patrick Weinkam; Jörg Zimmermann; Floyd E Romesberg; Peter G Wolynes
Journal:  Acc Chem Res       Date:  2010-05-18       Impact factor: 22.384

6.  Effect of methionine80 heme coordination on domain swapping of cytochrome c.

Authors:  Shun Hirota; Nobuhiro Yamashiro; Zhonghua Wang; Satoshi Nagao
Journal:  J Biol Inorg Chem       Date:  2017-02-28       Impact factor: 3.358

7.  Effect of a K72A Mutation on the Structure, Stability, Dynamics, and Peroxidase Activity of Human Cytochrome c.

Authors:  Shiloh M Nold; Haotian Lei; Tung-Chung Mou; Bruce E Bowler
Journal:  Biochemistry       Date:  2017-06-21       Impact factor: 3.162

8.  Structural and kinetic studies of imidazole binding to two members of the cytochrome c (6) family reveal an important role for a conserved heme pocket residue.

Authors:  Badri S Rajagopal; Michael T Wilson; Derek S Bendall; Christopher J Howe; Jonathan A R Worrall
Journal:  J Biol Inorg Chem       Date:  2011-01-26       Impact factor: 3.358

9.  Insights into the alkaline transformation of ferricytochrome c from (1)H NMR studies in 30% acetonitrile-water.

Authors:  S G Sivakolundu; P A Mabrouk
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

10.  Conformational change and human cytochrome c function: mutation of residue 41 modulates caspase activation and destabilizes Met-80 coordination.

Authors:  Tracy M Josephs; Matthew D Liptak; Gillian Hughes; Alexandra Lo; Rebecca M Smith; Sigurd M Wilbanks; Kara L Bren; Elizabeth C Ledgerwood
Journal:  J Biol Inorg Chem       Date:  2013-01-19       Impact factor: 3.358

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