Literature DB >> 25395068

Using an international p53 mutation database as a foundation for an online laboratory in an upper level undergraduate biology class.

Patricia G Melloy1.   

Abstract

A two-part laboratory exercise was developed to enhance classroom instruction on the significance of p53 mutations in cancer development. Students were asked to mine key information from an international database of p53 genetic changes related to cancer, the IARC TP53 database. Using this database, students designed several data mining activities to look at the changes in the p53 gene from a number of perspectives, including potential cancer-causing agents leading to particular changes and the prevalence of certain p53 variations in certain cancers. In addition, students gained a global perspective on cancer prevalence in different parts of the world. Students learned how to use the database in the first part of the exercise, and then used that knowledge to search particular cancers and cancer-causing agents of their choosing in the second part of the exercise. Students also connected the information gathered from the p53 exercise to a previous laboratory exercise looking at risk factors for cancer development. The goal of the experience was to increase student knowledge of the link between p53 genetic variation and cancer. Students also were able to walk a similar path through the website as a cancer researcher using the database to enhance bench work-based experiments with complementary large-scale database p53 variation information.
© 2014 The International Union of Biochemistry and Molecular Biology.

Entities:  

Keywords:  bioinformatics; cancer; laboratory exercise; molecular biology

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Year:  2014        PMID: 25395068     DOI: 10.1002/bmb.20831

Source DB:  PubMed          Journal:  Biochem Mol Biol Educ        ISSN: 1470-8175            Impact factor:   1.160


  1 in total

1.  Development of the Organonitrogen Biodegradation Database: Teaching Bioinformatics and Collaborative Skills to Undergraduates during a Pandemic.

Authors:  Serina L Robinson; Troy Biernath; Caleb Rosenthal; Dean Young; Lawrence P Wackett; Betsy M Martinez-Vaz
Journal:  J Microbiol Biol Educ       Date:  2021-03-31
  1 in total

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