Literature DB >> 25389060

Accelerated NMR spectroscopy with low-rank reconstruction.

Xiaobo Qu1, Maxim Mayzel, Jian-Feng Cai, Zhong Chen, Vladislav Orekhov.   

Abstract

Accelerated multi-dimensional NMR spectroscopy is a prerequisite for high-throughput applications, studying short-lived molecular systems and monitoring chemical reactions in real time. Non-uniform sampling is a common approach to reduce the measurement time. Here, a new method for high-quality spectra reconstruction from non-uniformly sampled data is introduced, which is based on recent developments in the field of signal processing theory and uses the so far unexploited general property of the NMR signal, its low rank. Using experimental and simulated data, we demonstrate that the low-rank reconstruction is a viable alternative to the current state-of-the-art technique compressed sensing. In particular, the low-rank approach is good in preserving of low-intensity broad peaks, and thus increases the effective sensitivity in the reconstructed spectra.
© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Keywords:  NMR spectroscopy; low-rank approximation; real-time measurements; structure elucidation

Year:  2014        PMID: 25389060     DOI: 10.1002/anie.201409291

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  11 in total

1.  Accelerating two-dimensional infrared spectroscopy while preserving lineshapes using GIRAF.

Authors:  Ipshita Bhattacharya; Jonathan J Humston; Christopher M Cheatum; Mathews Jacob
Journal:  Opt Lett       Date:  2017-11-15       Impact factor: 3.776

2.  Robust recovery of complex exponential signals from random Gaussian projections via low rank Hankel matrix reconstruction.

Authors:  Jian-Feng Cai; Xiaobo Qu; Weiyu Xu; Gui-Bo Ye
Journal:  Appl Comput Harmon Anal       Date:  2016-03-02       Impact factor: 3.055

3.  Pitfalls in compressed sensing reconstruction and how to avoid them.

Authors:  Alexandra Shchukina; Paweł Kasprzak; Rupashree Dass; Michał Nowakowski; Krzysztof Kazimierczuk
Journal:  J Biomol NMR       Date:  2016-11-11       Impact factor: 2.835

4.  Structured Low-Rank Algorithms: Theory, Magnetic Resonance Applications, and Links to Machine Learning.

Authors:  Mathews Jacob; Merry P Mani; Jong Chul Ye
Journal:  IEEE Signal Process Mag       Date:  2020-01-17       Impact factor: 12.551

5.  Accelerated high-bandwidth MR spectroscopic imaging using compressed sensing.

Authors:  Peng Cao; Peter J Shin; Ilwoo Park; Chloe Najac; Irene Marco-Rius; Daniel B Vigneron; Sarah J Nelson; Sabrina M Ronen; Peder E Z Larson
Journal:  Magn Reson Med       Date:  2016-05-26       Impact factor: 4.668

6.  A simple approach for reconstruction of non-uniformly sampled pseudo-3D NMR data for accurate measurement of spin relaxation parameters.

Authors:  Kyle W East; Frank Delaglio; George P Lisi
Journal:  J Biomol NMR       Date:  2021-05-07       Impact factor: 2.582

7.  Development of a method for reconstruction of crowded NMR spectra from undersampled time-domain data.

Authors:  Takumi Ueda; Chie Yoshiura; Masahiko Matsumoto; Yutaka Kofuku; Junya Okude; Keita Kondo; Yutaro Shiraishi; Koh Takeuchi; Ichio Shimada
Journal:  J Biomol NMR       Date:  2015-02-13       Impact factor: 2.835

8.  XLSY: Extra-Large NMR Spectroscopy.

Authors:  Yulia Pustovalova; Maxim Mayzel; Vladislav Yu Orekhov
Journal:  Angew Chem Int Ed Engl       Date:  2018-10-01       Impact factor: 15.336

9.  Coil Combination of Multichannel Single Voxel Magnetic Resonance Spectroscopy with Repeatedly Sampled In Vivo Data.

Authors:  Wanqi Hu; Huiting Liu; Dicheng Chen; Tianyu Qiu; Hongwei Sun; Chunyan Xiong; Jianzhong Lin; Di Guo; Hao Chen; Xiaobo Qu
Journal:  Molecules       Date:  2021-06-25       Impact factor: 4.411

10.  NMRFx Processor: a cross-platform NMR data processing program.

Authors:  Michael Norris; Bayard Fetler; Jan Marchant; Bruce A Johnson
Journal:  J Biomol NMR       Date:  2016-07-25       Impact factor: 2.835

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