Literature DB >> 25384764

The human mycobiome.

Patrick C Seed1.   

Abstract

Fungi are fundamental to the human microbiome, the collection of microbes distributed across and within the body, and the microbiome has been shown, in total, to modify fundamental human physiology, including energy acquisition, vitamin-cofactor availability, xenobiotic metabolism, immune development and function, and even neurological development and behavior. Here, a comprehensive review of current knowledge about the mycobiome, the collective of fungi within the microbiome, highlights methods for its study, diversity between body sites, and dynamics during human development, health, and disease. Early-stage studies show interactions between the mycobiome and other microbes, with host physiology, and in pathogenic and mutualistic phenotypes. Current research portends a vital role for the mycobiome in human health and disease.
Copyright © 2015 Cold Spring Harbor Laboratory Press; all rights reserved.

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Mesh:

Year:  2014        PMID: 25384764      PMCID: PMC4448585          DOI: 10.1101/cshperspect.a019810

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Med        ISSN: 2157-1422            Impact factor:   6.915


  53 in total

Review 1.  Oral flora and pathogenic organisms.

Authors:  G S Schuster
Journal:  Infect Dis Clin North Am       Date:  1999-12       Impact factor: 5.982

Review 2.  Isolation and identification of Candida from the oral cavity.

Authors:  D W Williams; M A Lewis
Journal:  Oral Dis       Date:  2000-01       Impact factor: 3.511

Review 3.  Human microbiome in health and disease.

Authors:  Kathryn J Pflughoeft; James Versalovic
Journal:  Annu Rev Pathol       Date:  2011-09-09       Impact factor: 23.472

4.  Interactions between commensal fungi and the C-type lectin receptor Dectin-1 influence colitis.

Authors:  Iliyan D Iliev; Vincent A Funari; Kent D Taylor; Quoclinh Nguyen; Christopher N Reyes; Samuel P Strom; Jordan Brown; Courtney A Becker; Phillip R Fleshner; Marla Dubinsky; Jerome I Rotter; Hanlin L Wang; Dermot P B McGovern; Gordon D Brown; David M Underhill
Journal:  Science       Date:  2012-06-06       Impact factor: 47.728

5.  Intracellular bacteria in placental basal plate localize to extravillous trophoblasts.

Authors:  B Cao; I U Mysorekar
Journal:  Placenta       Date:  2013-12-21       Impact factor: 3.481

6.  Differences in microbial signatures between rectal mucosal biopsies and rectal swabs.

Authors:  Félix Araújo-Pérez; Amber N McCoy; Charles Okechukwu; Ian M Carroll; Kevin M Smith; Kim Jeremiah; Robert S Sandler; Gary N Asher; Temitope O Keku
Journal:  Gut Microbes       Date:  2012-10-11

7.  PHYMYCO-DB: a curated database for analyses of fungal diversity and evolution.

Authors:  Stéphane Mahé; Marie Duhamel; Thomas Le Calvez; Laetitia Guillot; Ludmila Sarbu; Anthony Bretaudeau; Olivier Collin; Alexis Dufresne; E Toby Kiers; Philippe Vandenkoornhuyse
Journal:  PLoS One       Date:  2012-09-13       Impact factor: 3.240

8.  Development of the human infant intestinal microbiota.

Authors:  Chana Palmer; Elisabeth M Bik; Daniel B DiGiulio; David A Relman; Patrick O Brown
Journal:  PLoS Biol       Date:  2007-06-26       Impact factor: 8.029

9.  Redefining the human oral mycobiome with improved practices in amplicon-based taxonomy: discovery of Malassezia as a prominent commensal.

Authors:  Amanda K Dupuy; Marika S David; Lu Li; Thomas N Heider; Jason D Peterson; Elizabeth A Montano; Anna Dongari-Bagtzoglou; Patricia I Diaz; Linda D Strausbaugh
Journal:  PLoS One       Date:  2014-03-10       Impact factor: 3.240

10.  Comparison of brush and biopsy sampling methods of the ileal pouch for assessment of mucosa-associated microbiota of human subjects.

Authors:  Susan M Huse; Vincent B Young; Hilary G Morrison; Dionysios A Antonopoulos; John Kwon; Sushila Dalal; Rose Arrieta; Nathaniel A Hubert; Lici Shen; Joseph H Vineis; Jason C Koval; Mitchell L Sogin; Eugene B Chang; Laura E Raffals
Journal:  Microbiome       Date:  2014-02-14       Impact factor: 14.650

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  37 in total

Review 1.  Ecology of the Oral Microbiome: Beyond Bacteria.

Authors:  Jonathon L Baker; Batbileg Bor; Melissa Agnello; Wenyuan Shi; Xuesong He
Journal:  Trends Microbiol       Date:  2017-01-11       Impact factor: 17.079

2.  The emerging importance and challenges of the human mycobiome.

Authors:  Heidi H Kong; Alison Morris
Journal:  Virulence       Date:  2017-01-19       Impact factor: 5.882

Review 3.  Fungi in the healthy human gastrointestinal tract.

Authors:  Heather E Hallen-Adams; Mallory J Suhr
Journal:  Virulence       Date:  2016-10-13       Impact factor: 5.882

Review 4.  The Mycobiome: Cancer Pathogenesis, Diagnosis, and Therapy.

Authors:  Ahmed Gamal; Mohammed Elshaer; Mayyadah Alabdely; Ahmed Kadry; Thomas S McCormick; Mahmoud Ghannoum
Journal:  Cancers (Basel)       Date:  2022-06-10       Impact factor: 6.575

5.  Mycobiota composition and changes across pregnancy in patients with gestational diabetes mellitus (GDM).

Authors:  Ilario Ferrocino; Valentina Ponzo; Marianna Pellegrini; Ilaria Goitre; Matteo Papurello; Irene Franciosa; Chiara D'Eusebio; Ezio Ghigo; Luca Cocolin; Simona Bo
Journal:  Sci Rep       Date:  2022-06-02       Impact factor: 4.996

Review 6.  Learning from other diseases: protection and pathology in chronic fungal infections.

Authors:  Teresa Zelante; Giuseppe Pieraccini; Lucia Scaringi; Franco Aversa; Luigina Romani
Journal:  Semin Immunopathol       Date:  2015-09-17       Impact factor: 9.623

Review 7.  The vaginal mycobiome: A contemporary perspective on fungi in women's health and diseases.

Authors:  L Latéy Bradford; Jacques Ravel
Journal:  Virulence       Date:  2016-09-22       Impact factor: 5.882

Review 8.  Revisiting peptidoglycan sensing: interactions with host immunity and beyond.

Authors:  Geneva Maddison Crump; Junhui Zhou; Siavash Mashayekh; Catherine L Grimes
Journal:  Chem Commun (Camb)       Date:  2020-10-15       Impact factor: 6.222

Review 9.  State of the Art in the Culture of the Human Microbiota: New Interests and Strategies.

Authors:  Maryam Tidjani Alou; Sabrina Naud; Saber Khelaifia; Marion Bonnet; Jean-Christophe Lagier; Didier Raoult
Journal:  Clin Microbiol Rev       Date:  2020-10-28       Impact factor: 26.132

10.  Fungal species in endodontic infections: A systematic review and meta-analysis.

Authors:  Alice Alberti; Stefano Corbella; Silvio Taschieri; Luca Francetti; Kausar Sadia Fakhruddin; Lakshman Perera Samaranayake
Journal:  PLoS One       Date:  2021-07-22       Impact factor: 3.240

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