Literature DB >> 25383393

Deformation field correction for spatial normalization of PET images using a population-derived partial least squares model.

Murat Bilgel1, Aaron Carass2, Susan M Resnick3, Dean F Wong, Jerry L Prince.   

Abstract

Spatial normalization of positron emission tomography (PET) images is essential for population studies, yet work on anatomically accurate PET-to-PET registration is limited. We present a method for the spatial normalization of PET images that improves their anatomical alignment based on a deformation correction model learned from structural image registration. To generate the model, we first create a population-based PET template with a corresponding structural image template. We register each PET image onto the PET template using deformable registration that consists of an affine step followed by a diffeomorphic mapping. Constraining the affine step to be the same as that obtained from the PET registration, we find the diffeomorphic mapping that will align the structural image with the structural template. We train partial least squares (PLS) regression models within small neighborhoods to relate the PET intensities and deformation fields obtained from the diffeomorphic mapping to the structural image deformation fields. The trained model can then be used to obtain more accurate registration of PET images to the PET template without the use of a structural image. A cross validation based evaluation on 79 subjects shows that our method yields more accurate alignment of the PET images compared to deformable PET-to-PET registration as revealed by 1) a visual examination of the deformed images, 2) a smaller error in the deformation fields, and 3) a greater overlap of the deformed anatomical labels with ground truth segmentations.

Entities:  

Keywords:  PET registration; deformation field; partial least squares

Year:  2014        PMID: 25383393      PMCID: PMC4222176          DOI: 10.1007/978-3-319-10581-9_25

Source DB:  PubMed          Journal:  Mach Learn Med Imaging


  7 in total

1.  An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest.

Authors:  Rahul S Desikan; Florent Ségonne; Bruce Fischl; Brian T Quinn; Bradford C Dickerson; Deborah Blacker; Randy L Buckner; Anders M Dale; R Paul Maguire; Bradley T Hyman; Marilyn S Albert; Ronald J Killiany
Journal:  Neuroimage       Date:  2006-03-10       Impact factor: 6.556

2.  A nonparametric method for automatic correction of intensity nonuniformity in MRI data.

Authors:  J G Sled; A P Zijdenbos; A C Evans
Journal:  IEEE Trans Med Imaging       Date:  1998-02       Impact factor: 10.048

3.  Simple paradigm for extra-cerebral tissue removal: algorithm and analysis.

Authors:  Aaron Carass; Jennifer Cuzzocreo; M Bryan Wheeler; Pierre-Louis Bazin; Susan M Resnick; Jerry L Prince
Journal:  Neuroimage       Date:  2011-03-31       Impact factor: 6.556

4.  Implementation and validation of an adaptive template registration method for 18F-flutemetamol imaging data.

Authors:  Roger Lundqvist; Johan Lilja; Benjamin A Thomas; Jyrki Lötjönen; Victor L Villemagne; Christopher C Rowe; Lennart Thurfjell
Journal:  J Nucl Med       Date:  2013-06-05       Impact factor: 10.057

5.  The optimal template effect in hippocampus studies of diseased populations.

Authors:  Brian B Avants; Paul Yushkevich; John Pluta; David Minkoff; Marc Korczykowski; John Detre; James C Gee
Journal:  Neuroimage       Date:  2009-10-08       Impact factor: 6.556

6.  Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain.

Authors:  B B Avants; C L Epstein; M Grossman; J C Gee
Journal:  Med Image Anal       Date:  2007-06-23       Impact factor: 8.545

7.  MR-less high dimensional spatial normalization of 11C PiB PET images on a population of elderly, mild cognitive impaired and Alzheimer disease patients.

Authors:  Jurgen Fripp; Pierrick Bourgeat; Parnesh Raniga; Oscar Acosta; Victor Villemagne; Gareth Jones; Graeme O'keefe; Christopher Rowe; Sébastien Ourselin; Olivier Salvado
Journal:  Med Image Comput Comput Assist Interv       Date:  2008
  7 in total
  2 in total

1.  Deformation field correction for spatial normalization of PET images.

Authors:  Murat Bilgel; Aaron Carass; Susan M Resnick; Dean F Wong; Jerry L Prince
Journal:  Neuroimage       Date:  2015-06-30       Impact factor: 6.556

2.  Temporal Trajectory and Progression Score Estimation from Voxelwise Longitudinal Imaging Measures: Application to Amyloid Imaging.

Authors:  Murat Bilgel; Bruno Jedynak; Dean F Wong; Susan M Resnick; Jerry L Prince
Journal:  Inf Process Med Imaging       Date:  2015
  2 in total

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