Literature DB >> 25382957

Positive Semidefinite Rank-based Correlation Matrix Estimation with Application to Semiparametric Graph Estimation.

Tuo Zhao1, Kathryn Roeder2, Han Liu3.   

Abstract

Many statistical methods gain robustness and flexibility by sacrificing convenient computational structures. In this paper, we illustrate this fundamental tradeoff by studying a semi-parametric graph estimation problem in high dimensions. We explain how novel computational techniques help to solve this type of problem. In particular, we propose a nonparanormal neighborhood pursuit algorithm to estimate high dimensional semiparametric graphical models with theoretical guarantees. Moreover, we provide an alternative view to analyze the tradeoff between computational efficiency and statistical error under a smoothing optimization framework. Though this paper focuses on the problem of graph estimation, the proposed methodology is widely applicable to other problems with similar structures. We also report thorough experimental results on text, stock, and genomic datasets.

Entities:  

Year:  2014        PMID: 25382957      PMCID: PMC4219653          DOI: 10.1080/10618600.2013.858633

Source DB:  PubMed          Journal:  J Comput Graph Stat        ISSN: 1061-8600            Impact factor:   2.302


  9 in total

1.  Penalized likelihood methods for estimation of sparse high-dimensional directed acyclic graphs.

Authors:  Ali Shojaie; George Michailidis
Journal:  Biometrika       Date:  2010-07-09       Impact factor: 2.445

2.  Stability Approach to Regularization Selection (StARS) for High Dimensional Graphical Models.

Authors:  Han Liu; Kathryn Roeder; Larry Wasserman
Journal:  Adv Neural Inf Process Syst       Date:  2010-12-31

3.  Gradient directed regularization for sparse Gaussian concentration graphs, with applications to inference of genetic networks.

Authors:  Hongzhe Li; Jiang Gui
Journal:  Biostatistics       Date:  2005-12-02       Impact factor: 5.899

4.  Regularized linear discriminant analysis and its application in microarrays.

Authors:  Yaqian Guo; Trevor Hastie; Robert Tibshirani
Journal:  Biostatistics       Date:  2006-04-07       Impact factor: 5.899

5.  Robust Gaussian graphical modeling via l1 penalization.

Authors:  Hokeun Sun; Hongzhe Li
Journal:  Biometrics       Date:  2012-09-28       Impact factor: 2.571

6.  Sparsistency and Rates of Convergence in Large Covariance Matrix Estimation.

Authors:  Clifford Lam; Jianqing Fan
Journal:  Ann Stat       Date:  2009       Impact factor: 4.028

7.  A SPARSE CONDITIONAL GAUSSIAN GRAPHICAL MODEL FOR ANALYSIS OF GENETICAL GENOMICS DATA.

Authors:  Jianxin Yin; Hongzhe Li
Journal:  Ann Appl Stat       Date:  2011-12       Impact factor: 2.083

8.  Partial Correlation Estimation by Joint Sparse Regression Models.

Authors:  Jie Peng; Pei Wang; Nengfeng Zhou; Ji Zhu
Journal:  J Am Stat Assoc       Date:  2009-06-01       Impact factor: 5.033

9.  Sparse graphical Gaussian modeling of the isoprenoid gene network in Arabidopsis thaliana.

Authors:  Anja Wille; Philip Zimmermann; Eva Vranová; Andreas Fürholz; Oliver Laule; Stefan Bleuler; Lars Hennig; Amela Prelic; Peter von Rohr; Lothar Thiele; Eckart Zitzler; Wilhelm Gruissem; Peter Bühlmann
Journal:  Genome Biol       Date:  2004-10-25       Impact factor: 13.583

  9 in total
  5 in total

1.  LARGE COVARIANCE ESTIMATION THROUGH ELLIPTICAL FACTOR MODELS.

Authors:  Jianqing Fan; Han Liu; Weichen Wang
Journal:  Ann Stat       Date:  2018-06-27       Impact factor: 4.028

2.  Calibrated Multivariate Regression with Application to Neural Semantic Basis Discovery.

Authors:  Han Liu; Lie Wang; Tuo Zhao
Journal:  J Mach Learn Res       Date:  2015-08       Impact factor: 3.654

3.  Accelerated Path-following Iterative Shrinkage Thresholding Algorithm with Application to Semiparametric Graph Estimation.

Authors:  Tuo Zhao; Han Liu
Journal:  J Comput Graph Stat       Date:  2016-11-10       Impact factor: 2.302

4.  QUADRO: A SUPERVISED DIMENSION REDUCTION METHOD VIA RAYLEIGH QUOTIENT OPTIMIZATION.

Authors:  Jianqing Fan; Zheng Tracy Ke; Han Liu; Lucy Xia
Journal:  Ann Stat       Date:  2015       Impact factor: 4.028

5.  A Latent Gaussian Copula Model for Mixed Data Analysis in Brain Imaging Genetics.

Authors:  Aiying Zhang; Jian Fang; Wenxing Hu; Vince D Calhoun; Yu-Ping Wang
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2021-08-06       Impact factor: 3.710

  5 in total

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