Literature DB >> 25380447

Allosteric targeting of receptor tyrosine kinases.

Frederik De Smet1, Arthur Christopoulos2, Peter Carmeliet3.   

Abstract

The drug discovery landscape has been transformed over the past decade by the discovery of allosteric modulators of all major mammalian receptor superfamilies. Allosteric ligands are a rich potential source of drugs and drug targets with clear therapeutic advantages. G protein-coupled receptors, ligand-gated ion channels and intracellular nuclear hormone receptors have all been targeted by allosteric modulators. More recently, a receptor tyrosine kinase (RTK) has been targeted by an extracellular small-molecule allosteric modulator. Allosteric mechanisms of structurally distinct molecules that target the various receptor families are more alike than originally anticipated and include selectivity, orthosteric probe dependence and pathway-biased signaling.

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Year:  2014        PMID: 25380447     DOI: 10.1038/nbt.3028

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  60 in total

1.  Detection of allosteric kinase inhibitors by displacement of active site probes.

Authors:  Connie S Lebakken; Laurie J Reichling; Jason M Ellefson; Steven M Riddle
Journal:  J Biomol Screen       Date:  2012-03-26

Review 2.  Receptor tyrosine kinase transmembrane domains: Function, dimer structure and dimerization energetics.

Authors:  Edwin Li; Kalina Hristova
Journal:  Cell Adh Migr       Date:  2010-04-23       Impact factor: 3.405

Review 3.  How many drug targets are there?

Authors:  John P Overington; Bissan Al-Lazikani; Andrew L Hopkins
Journal:  Nat Rev Drug Discov       Date:  2006-12       Impact factor: 84.694

4.  Gambogic amide, a selective agonist for TrkA receptor that possesses robust neurotrophic activity, prevents neuronal cell death.

Authors:  Sung-Wuk Jang; Masashi Okada; Iqbal Sayeed; Ge Xiao; Donald Stein; Peng Jin; Keqiang Ye
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-02       Impact factor: 11.205

5.  BMS-345541 is a highly selective inhibitor of I kappa B kinase that binds at an allosteric site of the enzyme and blocks NF-kappa B-dependent transcription in mice.

Authors:  James R Burke; Mark A Pattoli; Kurt R Gregor; Patrick J Brassil; John F MacMaster; Kim W McIntyre; Xiaoxia Yang; Violetta S Iotzova; Wendy Clarke; Joann Strnad; Yuping Qiu; F Christopher Zusi
Journal:  J Biol Chem       Date:  2002-10-25       Impact factor: 5.157

6.  Molecular mechanism of SSR128129E, an extracellularly acting, small-molecule, allosteric inhibitor of FGF receptor signaling.

Authors:  Corentin Herbert; Ulrich Schieborr; Krishna Saxena; Jarek Juraszek; Frederik De Smet; Chantal Alcouffe; Marc Bianciotto; Giorgio Saladino; David Sibrac; Denis Kudlinzki; Sridhar Sreeramulu; Alan Brown; Patrice Rigon; Jean-Pascal Herault; Gilbert Lassalle; Tom L Blundell; Frederic Rousseau; Ann Gils; Joost Schymkowitz; Peter Tompa; Jean-Marc Herbert; Peter Carmeliet; Francesco Luigi Gervasio; Harald Schwalbe; Françoise Bono
Journal:  Cancer Cell       Date:  2013-04-15       Impact factor: 31.743

7.  Crystal structure and allosteric activation of protein kinase C βII.

Authors:  Thomas A Leonard; Bartosz Różycki; Layla F Saidi; Gerhard Hummer; James H Hurley
Journal:  Cell       Date:  2011-01-07       Impact factor: 41.582

Review 8.  Cell signaling by receptor tyrosine kinases.

Authors:  Mark A Lemmon; Joseph Schlessinger
Journal:  Cell       Date:  2010-06-25       Impact factor: 41.582

9.  Rational engineering of enzyme allosteric regulation through sequence evolution analysis.

Authors:  Jae-Seong Yang; Sang Woo Seo; Sungho Jang; Gyoo Yeol Jung; Sanguk Kim
Journal:  PLoS Comput Biol       Date:  2012-07-12       Impact factor: 4.475

10.  Processing of VEGF-A by matrix metalloproteinases regulates bioavailability and vascular patterning in tumors.

Authors:  Sunyoung Lee; Shahla M Jilani; Ganka V Nikolova; Darren Carpizo; M Luisa Iruela-Arispe
Journal:  J Cell Biol       Date:  2005-05-23       Impact factor: 10.539

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  28 in total

1.  HTS-compatible FRET-based conformational sensors clarify membrane receptor activation.

Authors:  Pauline Scholler; David Moreno-Delgado; Nathalie Lecat-Guillet; Etienne Doumazane; Carine Monnier; Fabienne Charrier-Savournin; Ludovic Fabre; Cédric Chouvet; Stéphanie Soldevila; Laurent Lamarque; Geoffrey Donsimoni; Thomas Roux; Jurriaan M Zwier; Eric Trinquet; Philippe Rondard; Jean-Philippe Pin
Journal:  Nat Chem Biol       Date:  2017-01-30       Impact factor: 15.040

Review 2.  Targeting kinase signaling pathways with constrained peptide scaffolds.

Authors:  Laura E Hanold; Melody D Fulton; Eileen J Kennedy
Journal:  Pharmacol Ther       Date:  2017-02-07       Impact factor: 12.310

3.  Heavy lessons in protein allostery.

Authors:  Lars Konermann
Journal:  Nat Struct Mol Biol       Date:  2016-06-07       Impact factor: 15.369

4.  Allosteric activation of membrane-bound glutamate receptors using coordination chemistry within living cells.

Authors:  Shigeki Kiyonaka; Ryou Kubota; Yukiko Michibata; Masayoshi Sakakura; Hideo Takahashi; Tomohiro Numata; Ryuji Inoue; Michisuke Yuzaki; Itaru Hamachi
Journal:  Nat Chem       Date:  2016-06-27       Impact factor: 24.427

5.  The long-term effects of stress and kappa opioid receptor activation on conditioned place aversion in male and female California mice.

Authors:  Abigail R Laman-Maharg; Tiffany Copeland; Evelyn Ordoñes Sanchez; Katharine L Campi; Brian C Trainor
Journal:  Behav Brain Res       Date:  2017-06-15       Impact factor: 3.332

6.  Identification and characterization of fragment binding sites for allosteric ligand design using the site identification by ligand competitive saturation hotspots approach (SILCS-Hotspots).

Authors:  Alexander D MacKerell; Sunhwan Jo; Sirish Kaushik Lakkaraju; Christoffer Lind; Wenbo Yu
Journal:  Biochim Biophys Acta Gen Subj       Date:  2020-01-03       Impact factor: 3.770

7.  Allosteric Modulation of Intact γ-Secretase Structural Dynamics.

Authors:  Ji Young Lee; Zhiwei Feng; Xiang-Qun Xie; Ivet Bahar
Journal:  Biophys J       Date:  2017-12-19       Impact factor: 4.033

8.  Proteome-Scale Investigation of Protein Allosteric Regulation Perturbed by Somatic Mutations in 7,000 Cancer Genomes.

Authors:  Qiancheng Shen; Feixiong Cheng; Huili Song; Weiqiang Lu; Junfei Zhao; Xiaoli An; Mingyao Liu; Guoqiang Chen; Zhongming Zhao; Jian Zhang
Journal:  Am J Hum Genet       Date:  2016-12-08       Impact factor: 11.025

9.  A novel fibroblast growth factor-1 ligand with reduced heparin binding protects the heart against ischemia-reperfusion injury in the presence of heparin co-administration.

Authors:  Chahua Huang; Yang Liu; Andrew Beenken; Lin Jiang; Xiang Gao; Zhifeng Huang; Anna Hsu; Garrett J Gross; Yi-Gang Wang; Moosa Mohammadi; Jo El J Schultz
Journal:  Cardiovasc Res       Date:  2017-11-01       Impact factor: 10.787

10.  Monomeric ß-amyloid interacts with type-1 insulin-like growth factor receptors to provide energy supply to neurons.

Authors:  Maria L Giuffrida; Marianna F Tomasello; Giuseppe Pandini; Filippo Caraci; Giuseppe Battaglia; Carla Busceti; Paola Di Pietro; Giuseppe Pappalardo; Francesco Attanasio; Santina Chiechio; Silvia Bagnoli; Benedetta Nacmias; Sandro Sorbi; Riccardo Vigneri; Enrico Rizzarelli; Ferdinando Nicoletti; Agata Copani
Journal:  Front Cell Neurosci       Date:  2015-08-07       Impact factor: 5.505

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