Literature DB >> 25379085

Microfluidic approaches to rapid and efficient aptamer selection.

Hui Lin1, Weiting Zhang1, Shasha Jia1, Zhichao Guan1, Chaoyong James Yang1, Zhi Zhu1.   

Abstract

With their advantages as molecular recognition elements, aptamers have been extensively studied and used for bioanalytical and biomedical applications. However, the process of enrichment and screening of aptamers remains a bottleneck for aptamer development. Recently, microfluidic methods have been increasingly used for rapid and efficient aptamer selection, showing their remarkable advantages over conventional methods. This review briefly introduces aptamers and their advantages. The conventional process of generating aptamers is discussed, followed by the analysis of the key obstacles to efficient aptamer selection. Microfluidic methods for highly efficient enrichment and screening of aptamers are reviewed in detail.

Year:  2014        PMID: 25379085      PMCID: PMC4189129          DOI: 10.1063/1.4890542

Source DB:  PubMed          Journal:  Biomicrofluidics        ISSN: 1932-1058            Impact factor:   2.800


  84 in total

1.  Development of DNA aptamers using Cell-SELEX.

Authors:  Kwame Sefah; Dihua Shangguan; Xiangling Xiong; Meghan B O'Donoghue; Weihong Tan
Journal:  Nat Protoc       Date:  2010-06-03       Impact factor: 13.491

2.  Highly parallel single-molecule amplification approach based on agarose droplet polymerase chain reaction for efficient and cost-effective aptamer selection.

Authors:  Wei Yun Zhang; Wenhua Zhang; Zhiyuan Liu; Cong Li; Zhi Zhu; Chaoyong James Yang
Journal:  Anal Chem       Date:  2011-12-09       Impact factor: 6.986

3.  Sol-gel derived nanoporous compositions for entrapping small molecules and their outlook toward aptamer screening.

Authors:  Ji-Young Ahn; SangWook Lee; Minjoung Jo; Jeehye Kang; Eunkyung Kim; Ok Chan Jeong; Thomas Laurell; Soyoun Kim
Journal:  Anal Chem       Date:  2012-02-27       Impact factor: 6.986

4.  Nonequilibrium capillary electrophoresis of equilibrium mixtures: a universal tool for development of aptamers.

Authors:  Maxim Berezovski; Andrei Drabovich; Svetlana M Krylova; Michael Musheev; Victor Okhonin; Alexander Petrov; Sergey N Krylov
Journal:  J Am Chem Soc       Date:  2005-03-09       Impact factor: 15.419

5.  Light-switching excimer probes for rapid protein monitoring in complex biological fluids.

Authors:  Chaoyong James Yang; Steffen Jockusch; Marie Vicens; Nicholas J Turro; Weihong Tan
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-21       Impact factor: 11.205

6.  Selection and elution of aptamers using nanoporous sol-gel arrays with integrated microheaters.

Authors:  Seung-Min Park; Ji-Young Ahn; Minjoung Jo; Dong-Ki Lee; John T Lis; Harold G Craighead; Soyoun Kim
Journal:  Lab Chip       Date:  2009-02-13       Impact factor: 6.799

7.  Aptamer modules as sensors and detectors.

Authors:  Michael Famulok; Günter Mayer
Journal:  Acc Chem Res       Date:  2011-08-05       Impact factor: 22.384

8.  Target-responsive "sweet" hydrogel with glucometer readout for portable and quantitative detection of non-glucose targets.

Authors:  Ling Yan; Zhi Zhu; Yuan Zou; Yishun Huang; Dewen Liu; Shasha Jia; Dunming Xu; Min Wu; Yu Zhou; Shuang Zhou; Chaoyong James Yang
Journal:  J Am Chem Soc       Date:  2013-01-29       Impact factor: 15.419

9.  Capillary electrophoresis-SELEX selection of catalytic DNA aptamers for a small-molecule porphyrin target.

Authors:  Jing Yang; Michael T Bowser
Journal:  Anal Chem       Date:  2013-01-14       Impact factor: 6.986

Review 10.  Screening of aptamers on microfluidic systems for clinical applications.

Authors:  Chen-Hsun Weng; Chao-Jyun Huang; Gwo-Bin Lee
Journal:  Sensors (Basel)       Date:  2012-07-11       Impact factor: 3.576

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  8 in total

1.  Automated selection of aptamers against cholangiocarcinoma cells on an integrated microfluidic platform.

Authors:  Priya Gopinathan; Lien-Yu Hung; Chih-Hung Wang; Nai-Jung Chiang; Yu-Chun Wang; Yan-Shen Shan; Gwo-Bin Lee
Journal:  Biomicrofluidics       Date:  2017-07-05       Impact factor: 2.800

2.  An Integrated Microfluidic SELEX Approach Using Combined Electrokinetic and Hydrodynamic Manipulation.

Authors:  Timothy Olsen; Jing Zhu; Jinho Kim; Renjun Pei; Milan N Stojanovic; Qiao Lin
Journal:  SLAS Technol       Date:  2016-07-20       Impact factor: 3.047

Review 3.  Aptamers: versatile molecular recognition probes for cancer detection.

Authors:  Hongguang Sun; Weihong Tan; Youli Zu
Journal:  Analyst       Date:  2016-01-21       Impact factor: 4.616

Review 4.  Aptamer Bioinformatics.

Authors:  Andrew B Kinghorn; Lewis A Fraser; Shaolin Lang; Simon Chi-Chin Shiu; Julian A Tanner
Journal:  Int J Mol Sci       Date:  2017-11-24       Impact factor: 5.923

5.  Predicting Future Prospects of Aptamers in Field-Effect Transistor Biosensors.

Authors:  Cao-An Vu; Wen-Yih Chen
Journal:  Molecules       Date:  2020-02-05       Impact factor: 4.411

Review 6.  Microfluidics Integrated Biosensors: A Leading Technology towards Lab-on-a-Chip and Sensing Applications.

Authors:  George Luka; Ali Ahmadi; Homayoun Najjaran; Evangelyn Alocilja; Maria DeRosa; Kirsten Wolthers; Ahmed Malki; Hassan Aziz; Asmaa Althani; Mina Hoorfar
Journal:  Sensors (Basel)       Date:  2015-12-01       Impact factor: 3.576

7.  Construction and optimization of an efficient amplification method of a random ssDNA library by asymmetric emulsion PCR.

Authors:  Keke Shao; Xinhui Shi; Xiangjun Zhu; Leilei Cui; Qixiang Shao; Da Ma
Journal:  Biotechnol Appl Biochem       Date:  2016-10-31       Impact factor: 2.431

Review 8.  Predicting the Uncertain Future of Aptamer-Based Diagnostics and Therapeutics.

Authors:  John G Bruno
Journal:  Molecules       Date:  2015-04-16       Impact factor: 4.411

  8 in total

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