Literature DB >> 2537627

Studies on electron transfer from methanol dehydrogenase to cytochrome cL, both purified from Hyphomicrobium X.

M Dijkstra1, J Frank, J A Duine.   

Abstract

Ferricytochrome cL isolated from Hyphomicrobium X is an electron acceptor in assays for homologous methanol dehydrogenase (MDH), albeit a poor one compared with artificial dyes. The intermediates of MDH seen during the reaction are identical with those observed with Wurster's Blue as electron acceptor, indicating that the reaction cycles are similar. The assay showed a pH optimum of approx. 7.0 and scarcely any stimulation by NH4Cl, this being in contrast with assays with artificial dyes, where strong activation by NH4Cl and much higher pH optima have been reported. From the results obtained with stopped-flow as well as steady-state kinetics, combined with the isotope effects found for C2H3OH, it appeared that the dissimilarities between the electron acceptors can be explained from different rate-limiting steps in the reaction cycles. Ferricytochrome cL is an excellent oxidant of the reduced MDH forms at pH 7.0, but the substrate oxidation step is very slow and the activation by NH4Cl is very poor at this pH. At pH 9.0 the reverse situation exists: ferricytochrome cL is a poor oxidant of the reduced forms of MDH at this pH. No C2H3OH isotope effect was observed under these conditions, indicating that substrate oxidation is not rate-limiting, so that activation by NH4Cl cannot be found. Since just the opposite holds for assays with artificial dyes, the poor electron-acceptor capability and the different pH optimum of ferricytochrome cL as well as the insignificant activating effect of NH4Cl (all compared with artificial assays) can be explained. Although different views have been reported on the rate-limiting steps in the systems from Methylophilus methylotrophus and Methylobacterium sp. strain AM1, these are most probably incorrect, as rate-limiting electron transfer between ferrocytochrome cL and horse heart ferricytochrome c can occur. Therefore the conclusions derived for the Hyphomicrobium X system might also apply to the systems from other methylotrophic bacteria. Comparison of the assays performed in vitro (at pH 7.0) having ferricytochrome cL and Wurster's Blue as electron acceptor with methanol oxidation by whole cells shows that the former has similarity whereas the latter has not, this being although ferricytochrome cL is a poor electron acceptor in the assay performed in vitro. The reason for this is the absence of a (natural) activator able to activate the (rate-limiting) substrate oxidation step at physiological pH values.

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Year:  1989        PMID: 2537627      PMCID: PMC1135541          DOI: 10.1042/bj2570087

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  21 in total

1.  Kinetic and spectroscopic evidence for different forms of ferric cytochrome c at very low ionic strength and neutral pH.

Authors:  T Goldkorn; A Schejter
Journal:  FEBS Lett       Date:  1977-03-15       Impact factor: 4.124

2.  The reaction of ferric cytochrome c with dithionite at very low ionic strength.

Authors:  T Goldkorn; A Schejter
Journal:  FEBS Lett       Date:  1977-10-15       Impact factor: 4.124

3.  Purification and properties of methanol dehydrogenase from Hyphomicrobium x.

Authors:  J A Duine; J Frank; J Westerling
Journal:  Biochim Biophys Acta       Date:  1978-06-09

4.  The soluble cytochromes c of methanol-grown Hyphomicrobium X. Evidence against the involvement of autoreduction in electron-acceptor functioning of cytochrome cL.

Authors:  M Dijkstra; J Frank; J E van Wielink; J A Duine
Journal:  Biochem J       Date:  1988-04-15       Impact factor: 3.857

5.  The direct linear plot. A new graphical procedure for estimating enzyme kinetic parameters.

Authors:  R Eisenthal; A Cornish-Bowden
Journal:  Biochem J       Date:  1974-06       Impact factor: 3.857

6.  The reaction between cytochrome c1 and cytochrome c.

Authors:  B W König; J Wilms; B F Van Gelder
Journal:  Biochim Biophys Acta       Date:  1981-06-12

7.  A periplasmic location for methanol dehydrogenase from Paracoccus denitrificans: implications for proton pumping by cytochrome aa3.

Authors:  P R Alefounder; S J Ferguson
Journal:  Biochem Biophys Res Commun       Date:  1981-02-12       Impact factor: 3.575

8.  The interaction between methanol dehydrogenase and the autoreducible cytochromes c of the facultative methylotroph Pseudomonas AM1.

Authors:  D T O'Keeffe; C Anthony
Journal:  Biochem J       Date:  1980-08-15       Impact factor: 3.857

9.  Studies on methanol dehydrogenase from Hyphomicrobium X. Isolation of an oxidized form of the enzyme.

Authors:  J A Duine; J Frank
Journal:  Biochem J       Date:  1980-04-01       Impact factor: 3.857

10.  Photoreduction of flavoproteins and other biological compounds catalyzed by deazaflavins.

Authors:  V Massey; P Hemmerich
Journal:  Biochemistry       Date:  1978-01-10       Impact factor: 3.162

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  14 in total

1.  Crystallization and preliminary X-ray crystallographic analysis of MxaJ, a component of the methanol-oxidizing system operon from the marine bacterium Methylophaga aminisulfidivorans MPT.

Authors:  Jin Myung Choi; Jung Hun Kang; Dong Woo Lee; Si Wouk Kim; Sung Haeng Lee
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-07-27

2.  Soluble cytochromes from the marine methanotroph Methylomonas sp. strain A4.

Authors:  A A DiSpirito; J D Lipscomb; M E Lidstrom
Journal:  J Bacteriol       Date:  1990-09       Impact factor: 3.490

Review 3.  C1 metabolism in Paracoccus denitrificans: genetics of Paracoccus denitrificans.

Authors:  N Harms; R J van Spanning
Journal:  J Bioenerg Biomembr       Date:  1991-04       Impact factor: 2.945

Review 4.  The structure and function of methanol dehydrogenase and related quinoproteins containing pyrrolo-quinoline quinone.

Authors:  C Anthony; M Ghosh; C C Blake
Journal:  Biochem J       Date:  1994-12-15       Impact factor: 3.857

5.  XoxF is required for expression of methanol dehydrogenase in Methylobacterium extorquens AM1.

Authors:  Elizabeth Skovran; Alexander D Palmer; Austin M Rountree; Nathan M Good; Mary E Lidstrom
Journal:  J Bacteriol       Date:  2011-08-26       Impact factor: 3.490

Review 6.  Quinoprotein-catalysed reactions.

Authors:  C Anthony
Journal:  Biochem J       Date:  1996-12-15       Impact factor: 3.857

7.  Purification, crystallization and preliminary X-ray crystallographic analysis of a methanol dehydrogenase from the marine bacterium Methylophaga aminisulfidivorans MP(T).

Authors:  Jin Myung Choi; Hee Gon Kim; Jeong Sun Kim; Hyung Seop Youn; Soo Hyun Eom; Sung Lim Yu; Si Wouk Kim; Sung Haeng Lee
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-03-30

Review 8.  Determination of enzyme mechanisms by molecular dynamics: studies on quinoproteins, methanol dehydrogenase, and soluble glucose dehydrogenase.

Authors:  Swarnalatha Y Reddy; Thomas C Bruice
Journal:  Protein Sci       Date:  2004-08       Impact factor: 6.725

9.  X-ray structure of methanol dehydrogenase from Paracoccus denitrificans and molecular modeling of its interactions with cytochrome c-551i.

Authors:  Zong-Xiang Xia; Wei-Wen Dai; Yong-Ning He; Scott A White; F Scott Mathews; Victor L Davidson
Journal:  J Biol Inorg Chem       Date:  2003-09-23       Impact factor: 3.358

10.  Quaternary structure of quinoprotein ethanol dehydrogenase from Pseudomonas aeruginosa and its reoxidation with a novel cytochrome c from this organism.

Authors:  J M Schrover; J Frank; J E van Wielink; J A Duine
Journal:  Biochem J       Date:  1993-02-15       Impact factor: 3.857

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