Literature DB >> 25374358

Exome-wide rare variant analysis identifies TUBA4A mutations associated with familial ALS.

Bradley N Smith1, Nicola Ticozzi2, Claudia Fallini3, Athina Soragia Gkazi1, Simon Topp1, Kevin P Kenna4, Emma L Scotter1, Jason Kost5, Pamela Keagle3, Jack W Miller1, Daniela Calini2, Caroline Vance1, Eric W Danielson3, Claire Troakes1, Cinzia Tiloca6, Safa Al-Sarraj1, Elizabeth A Lewis3, Andrew King1, Claudia Colombrita2, Viviana Pensato7, Barbara Castellotti7, Jacqueline de Belleroche8, Frank Baas9, Anneloor L M A ten Asbroek9, Peter C Sapp3, Diane McKenna-Yasek3, Russell L McLaughlin10, Meraida Polak11, Seneshaw Asress11, Jesús Esteban-Pérez12, José Luis Muñoz-Blanco13, Michael Simpson14, Wouter van Rheenen15, Frank P Diekstra15, Giuseppe Lauria16, Stefano Duga17, Stefania Corti18, Cristina Cereda19, Lucia Corrado20, Gianni Sorarù21, Karen E Morrison22, Kelly L Williams23, Garth A Nicholson24, Ian P Blair23, Patrick A Dion25, Claire S Leblond25, Guy A Rouleau25, Orla Hardiman10, Jan H Veldink15, Leonard H van den Berg15, Ammar Al-Chalabi26, Hardev Pall27, Pamela J Shaw28, Martin R Turner29, Kevin Talbot29, Franco Taroni7, Alberto García-Redondo12, Zheyang Wu30, Jonathan D Glass11, Cinzia Gellera7, Antonia Ratti2, Robert H Brown3, Vincenzo Silani2, Christopher E Shaw1, John E Landers31.   

Abstract

Exome sequencing is an effective strategy for identifying human disease genes. However, this methodology is difficult in late-onset diseases where limited availability of DNA from informative family members prohibits comprehensive segregation analysis. To overcome this limitation, we performed an exome-wide rare variant burden analysis of 363 index cases with familial ALS (FALS). The results revealed an excess of patient variants within TUBA4A, the gene encoding the Tubulin, Alpha 4A protein. Analysis of a further 272 FALS cases and 5,510 internal controls confirmed the overrepresentation as statistically significant and replicable. Functional analyses revealed that TUBA4A mutants destabilize the microtubule network, diminishing its repolymerization capability. These results further emphasize the role of cytoskeletal defects in ALS and demonstrate the power of gene-based rare variant analyses in situations where causal genes cannot be identified through traditional segregation analysis.

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Year:  2014        PMID: 25374358      PMCID: PMC4521390          DOI: 10.1016/j.neuron.2014.09.027

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   17.173


  34 in total

1.  Disease-associated mutations in TUBA1A result in a spectrum of defects in the tubulin folding and heterodimer assembly pathway.

Authors:  Guoling Tian; Xavier H Jaglin; David A Keays; Fiona Francis; Jamel Chelly; Nicholas J Cowan
Journal:  Hum Mol Genet       Date:  2010-07-05       Impact factor: 6.150

2.  Mutations in the neuronal ß-tubulin subunit TUBB3 result in malformation of cortical development and neuronal migration defects.

Authors:  Karine Poirier; Yoann Saillour; Nadia Bahi-Buisson; Xavier H Jaglin; Catherine Fallet-Bianco; Rima Nabbout; Laetitia Castelnau-Ptakhine; Agathe Roubertie; Tania Attie-Bitach; Isabelle Desguerre; David Genevieve; Christine Barnerias; Boris Keren; Nicolas Lebrun; Nathalie Boddaert; Féréchté Encha-Razavi; Jamel Chelly
Journal:  Hum Mol Genet       Date:  2010-09-09       Impact factor: 6.150

3.  Mutations in TUBG1, DYNC1H1, KIF5C and KIF2A cause malformations of cortical development and microcephaly.

Authors:  Karine Poirier; Nicolas Lebrun; Loic Broix; Guoling Tian; Yoann Saillour; Cécile Boscheron; Elena Parrini; Stephanie Valence; Benjamin Saint Pierre; Madison Oger; Didier Lacombe; David Geneviève; Elena Fontana; Franscesca Darra; Claude Cances; Magalie Barth; Dominique Bonneau; Bernardo Dalla Bernadina; Sylvie N'guyen; Cyril Gitiaux; Philippe Parent; Vincent des Portes; Jean Michel Pedespan; Victoire Legrez; Laetitia Castelnau-Ptakine; Patrick Nitschke; Thierry Hieu; Cecile Masson; Diana Zelenika; Annie Andrieux; Fiona Francis; Renzo Guerrini; Nicholas J Cowan; Nadia Bahi-Buisson; Jamel Chelly
Journal:  Nat Genet       Date:  2013-04-21       Impact factor: 38.330

4.  Mutations in the beta-tubulin gene TUBB2B result in asymmetrical polymicrogyria.

Authors:  Xavier Hubert Jaglin; Karine Poirier; Yoann Saillour; Emmanuelle Buhler; Guoling Tian; Nadia Bahi-Buisson; Catherine Fallet-Bianco; Françoise Phan-Dinh-Tuy; Xiang Peng Kong; Pascale Bomont; Laëtitia Castelnau-Ptakhine; Sylvie Odent; Philippe Loget; Manoelle Kossorotoff; Irina Snoeck; Ghislaine Plessis; Philippe Parent; Cherif Beldjord; Carlos Cardoso; Alfonso Represa; Jonathan Flint; David Anthony Keays; Nicholas Justin Cowan; Jamel Chelly
Journal:  Nat Genet       Date:  2009-05-24       Impact factor: 38.330

Review 5.  Unlocking Mendelian disease using exome sequencing.

Authors:  Christian Gilissen; Alexander Hoischen; Han G Brunner; Joris A Veltman
Journal:  Genome Biol       Date:  2011-09-14       Impact factor: 13.583

6.  Mutations in the profilin 1 gene cause familial amyotrophic lateral sclerosis.

Authors:  Chi-Hong Wu; Claudia Fallini; Nicola Ticozzi; Pamela J Keagle; Peter C Sapp; Katarzyna Piotrowska; Patrick Lowe; Max Koppers; Diane McKenna-Yasek; Desiree M Baron; Jason E Kost; Paloma Gonzalez-Perez; Andrew D Fox; Jenni Adams; Franco Taroni; Cinzia Tiloca; Ashley Lyn Leclerc; Shawn C Chafe; Dev Mangroo; Melissa J Moore; Jill A Zitzewitz; Zuo-Shang Xu; Leonard H van den Berg; Jonathan D Glass; Gabriele Siciliano; Elizabeth T Cirulli; David B Goldstein; Francois Salachas; Vincent Meininger; Wilfried Rossoll; Antonia Ratti; Cinzia Gellera; Daryl A Bosco; Gary J Bassell; Vincenzo Silani; Vivian E Drory; Robert H Brown; John E Landers
Journal:  Nature       Date:  2012-08-23       Impact factor: 49.962

7.  Mutations in the Matrin 3 gene cause familial amyotrophic lateral sclerosis.

Authors:  Janel O Johnson; Erik P Pioro; Ashley Boehringer; Ruth Chia; Gabriella Restagno; Mario Sabatelli; Robert Bowser; Adriano Chiò; Bryan J Traynor; Howard Feit; Alan E Renton; Hannah A Pliner; Yevgeniya Abramzon; Giuseppe Marangi; Brett J Winborn; J Raphael Gibbs; Michael A Nalls; Sarah Morgan; Maryam Shoai; John Hardy; Alan Pittman; Richard W Orrell; Andrea Malaspina; Katie C Sidle; Pietro Fratta; Matthew B Harms; Robert H Baloh; Alan Pestronk; Conrad C Weihl; Ekaterina Rogaeva; Lorne Zinman; Vivian E Drory; Giuseppe Borghero; Gabriele Mora; Andrea Calvo; Jeffrey D Rothstein; Carsten Drepper; Michael Sendtner; Andrew B Singleton; J Paul Taylor; Mark R Cookson
Journal:  Nat Neurosci       Date:  2014-03-30       Impact factor: 24.884

8.  Mutations in the autoregulatory domain of β-tubulin 4a cause hereditary dystonia.

Authors:  Joshua Hersheson; Niccolo E Mencacci; Mary Davis; Nicola MacDonald; Daniah Trabzuni; Mina Ryten; Alan Pittman; Reema Paudel; Eleanna Kara; Katherine Fawcett; Vincent Plagnol; Kailash P Bhatia; Alan J Medlar; Horia C Stanescu; John Hardy; Robert Kleta; Nicholas W Wood; Henry Houlden
Journal:  Ann Neurol       Date:  2013-02-19       Impact factor: 10.422

9.  Microtubules containing acetylated alpha-tubulin in mammalian cells in culture.

Authors:  G Piperno; M LeDizet; X J Chang
Journal:  J Cell Biol       Date:  1987-02       Impact factor: 10.539

10.  Effects of tubulin acetylation and tubulin acetyltransferase binding on microtubule structure.

Authors:  Stuart C Howes; Gregory M Alushin; Toshinobu Shida; Maxence V Nachury; Eva Nogales
Journal:  Mol Biol Cell       Date:  2013-11-13       Impact factor: 4.138

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  130 in total

Review 1.  Familial Amyotrophic Lateral Sclerosis.

Authors:  Kevin Boylan
Journal:  Neurol Clin       Date:  2015-09-08       Impact factor: 3.806

2.  Editorial on the original article entitled "Genetic validation of a therapeutic target in a mouse model of ALS" published in the Science Translational Medicine on August 6, 2014.

Authors:  Vincenzo Silani
Journal:  Ann Transl Med       Date:  2015-05

Review 3.  Biological Spectrum of Amyotrophic Lateral Sclerosis Prions.

Authors:  Magdalini Polymenidou; Don W Cleveland
Journal:  Cold Spring Harb Perspect Med       Date:  2017-11-01       Impact factor: 6.915

4.  Dysregulation of a novel miR-1825/TBCB/TUBA4A pathway in sporadic and familial ALS.

Authors:  Anika M Helferich; Sarah J Brockmann; Jörg Reinders; Dhruva Deshpande; Karlheinz Holzmann; David Brenner; Peter M Andersen; Susanne Petri; Dietmar R Thal; Jens Michaelis; Markus Otto; Steffen Just; Albert C Ludolph; Karin M Danzer; Axel Freischmidt; Jochen H Weishaupt
Journal:  Cell Mol Life Sci       Date:  2018-07-20       Impact factor: 9.261

5.  Fragile X protein mitigates TDP-43 toxicity by remodeling RNA granules and restoring translation.

Authors:  Alyssa N Coyne; Shizuka B Yamada; Bhavani Bagevalu Siddegowda; Patricia S Estes; Benjamin L Zaepfel; Jeffrey S Johannesmeyer; Donovan B Lockwood; Linh T Pham; Michael P Hart; Joel A Cassel; Brian Freibaum; Ashley V Boehringer; J Paul Taylor; Allen B Reitz; Aaron D Gitler; Daniela C Zarnescu
Journal:  Hum Mol Genet       Date:  2015-09-18       Impact factor: 6.150

6.  TBCE Mutations Cause Early-Onset Progressive Encephalopathy with Distal Spinal Muscular Atrophy.

Authors:  Antonella Sferra; Gilbert Baillat; Teresa Rizza; Sabina Barresi; Elisabetta Flex; Giorgio Tasca; Adele D'Amico; Emanuele Bellacchio; Andrea Ciolfi; Viviana Caputo; Serena Cecchetti; Annalaura Torella; Ginevra Zanni; Daria Diodato; Emanuela Piermarini; Marcello Niceta; Antonietta Coppola; Enrico Tedeschi; Diego Martinelli; Carlo Dionisi-Vici; Vincenzo Nigro; Bruno Dallapiccola; Claudia Compagnucci; Marco Tartaglia; Georg Haase; Enrico Bertini
Journal:  Am J Hum Genet       Date:  2016-09-22       Impact factor: 11.025

Review 7.  Microtubule Destabilization Paves the Way to Parkinson's Disease.

Authors:  D Cartelli; G Cappelletti
Journal:  Mol Neurobiol       Date:  2016-10-18       Impact factor: 5.590

8.  Identification of rare protein disulfide isomerase gene variants in amyotrophic lateral sclerosis patients.

Authors:  Paloma Gonzalez-Perez; Ute Woehlbier; Ru-Ju Chian; Peter Sapp; Guy A Rouleau; Claire S Leblond; Hussein Daoud; Patrick A Dion; John E Landers; Claudio Hetz; Robert H Brown
Journal:  Gene       Date:  2015-04-22       Impact factor: 3.688

Review 9.  The Role of Sex and Sex Hormones in Neurodegenerative Diseases.

Authors:  Elisabetta Vegeto; Alessandro Villa; Sara Della Torre; Valeria Crippa; Paola Rusmini; Riccardo Cristofani; Mariarita Galbiati; Adriana Maggi; Angelo Poletti
Journal:  Endocr Rev       Date:  2020-04-01       Impact factor: 19.871

Review 10.  Neuromuscular Diseases Due to Chaperone Mutations: A Review and Some New Results.

Authors:  Jaakko Sarparanta; Per Harald Jonson; Sabita Kawan; Bjarne Udd
Journal:  Int J Mol Sci       Date:  2020-02-19       Impact factor: 5.923

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