Literature DB >> 25373866

Upgrading a microplate reader for photobiology and all-optical experiments.

Florian Richter1, Ulrike S Scheib, Jennifer Mehlhorn, Roman Schubert, Jonas Wietek, Oliver Gernetzki, Peter Hegemann, Tilo Mathes, Andreas Möglich.   

Abstract

Automation can vastly reduce the cost of experimental labor and thus facilitate high experimental throughput, but little off-the-shelf hardware for the automation of illumination experiments is commercially available. Here, we use inexpensive open-source electronics to add programmable illumination capabilities to a multimode microplate reader. We deploy this setup to characterize light-triggered phenomena in three different sensory photoreceptors. First, we study the photoactivation of Arabidopsis thaliana phytochrome B by light of different wavelengths. Second, we investigate the dark-state recovery kinetics of the Synechocystis sp. blue-light sensor Slr1694 at multiple temperatures and imidazole concentrations; while the kinetics of the W91F mutant of Slr1694 are strongly accelerated by imidazole, the wild-type protein is hardly affected. Third, we determine the light response of the Beggiatoa sp. photoactivatable adenylate cyclase bPAC in Chinese hamster ovary cells. bPAC is activated by blue light in dose-dependent manner with a half-maximal intensity of 0.58 mW cm(-2); intracellular cAMP spikes generated upon bPAC activation decay with a half time of about 5 minutes after light switch-off. Taken together, we present a setup which is easily assembled and which thus offers a facile approach to conducting illumination experiments at high throughput, reproducibility and fidelity.

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Year:  2015        PMID: 25373866     DOI: 10.1039/c4pp00361f

Source DB:  PubMed          Journal:  Photochem Photobiol Sci        ISSN: 1474-905X            Impact factor:   3.982


  13 in total

1.  An Open-Source Plate Reader.

Authors:  Karol P Szymula; Michael S Magaraci; Michael Patterson; Andrew Clark; Sevile G Mannickarottu; Brian Y Chow
Journal:  Biochemistry       Date:  2018-12-18       Impact factor: 3.162

Review 2.  How to train your microbe: methods for dynamically characterizing gene networks.

Authors:  Sebastian M Castillo-Hair; Oleg A Igoshin; Jeffrey J Tabor
Journal:  Curr Opin Microbiol       Date:  2015-02-10       Impact factor: 7.934

Review 3.  The Red Edge: Bilin-Binding Photoreceptors as Optogenetic Tools and Fluorescence Reporters.

Authors:  Kun Tang; Hannes M Beyer; Matias D Zurbriggen; Wolfgang Gärtner
Journal:  Chem Rev       Date:  2021-10-20       Impact factor: 72.087

4.  A fine-tuned azobenzene for enhanced photopharmacology in vivo.

Authors:  Vanessa A Gutzeit; Amanda Acosta-Ruiz; Hermany Munguba; Stephanie Häfner; Arnaud Landra-Willm; Bettina Mathes; Jürgen Mony; Dzianis Yarotski; Karl Börjesson; Conor Liston; Guillaume Sandoz; Joshua Levitz; Johannes Broichhagen
Journal:  Cell Chem Biol       Date:  2021-03-17       Impact factor: 8.116

Review 5.  Photoreceptor engineering.

Authors:  Thea Ziegler; Andreas Möglich
Journal:  Front Mol Biosci       Date:  2015-06-17

6.  High-Throughput All-Optical Analysis of Synaptic Transmission and Synaptic Vesicle Recycling in Caenorhabditis elegans.

Authors:  Sebastian Wabnig; Jana Fiona Liewald; Szi-Chieh Yu; Alexander Gottschalk
Journal:  PLoS One       Date:  2015-08-27       Impact factor: 3.240

7.  An open-hardware platform for optogenetics and photobiology.

Authors:  Karl P Gerhardt; Evan J Olson; Sebastian M Castillo-Hair; Lucas A Hartsough; Brian P Landry; Felix Ekness; Rayka Yokoo; Eric J Gomez; Prabha Ramakrishnan; Junghae Suh; David F Savage; Jeffrey J Tabor
Journal:  Sci Rep       Date:  2016-11-02       Impact factor: 4.379

Review 8.  Automation in the Life Science Research Laboratory.

Authors:  Ian Holland; Jamie A Davies
Journal:  Front Bioeng Biotechnol       Date:  2020-11-13

Review 9.  Genetically-encoded tools for cAMP probing and modulation in living systems.

Authors:  Valeriy M Paramonov; Veronika Mamaeva; Cecilia Sahlgren; Adolfo Rivero-Müller
Journal:  Front Pharmacol       Date:  2015-09-15       Impact factor: 5.810

10.  "Do It Yourself" Microbial Cultivation Techniques for Synthetic and Systems Biology: Cheap, Fun, and Flexible.

Authors:  Teuta Pilizota; Ya-Tang Yang
Journal:  Front Microbiol       Date:  2018-07-30       Impact factor: 5.640

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