Literature DB >> 25372759

Update on non-canonical microRNAs.

Ahmed Maher Abdelfattah, Chanhyun Park, Michael Y Choi.   

Abstract

Non-canonical microRNAs are a recently-discovered subset of microRNAs. They structurally and functionally resemble canonical miRNAs, but were found to follow distinct maturation pathways, typically bypassing one or more steps of the classic canonical biogenesis pathway. Non-canonical miRNAs were found to have diverse origins, including introns, snoRNAs, endogenous shRNAs and tRNAs. Our knowledge about their functions remains relatively primitive; however, many interesting discoveries have taken place in the past few years. They have been found to take part in several cellular processes, such as immune response and stem cell proliferation. Adversely, their deregulation has pathologic effects on several different tissues, which strongly suggests an integral role for non-canonical miRNAs in disease pathogenesis. In this review, we discuss the recently-discovered functional characteristics of non-canonical miRNAs and illustrate their principal maturation pathways as well as debating their potential role in multiple cellular processes.

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Year:  2014        PMID: 25372759      PMCID: PMC4343302          DOI: 10.1515/bmc-2014-0012

Source DB:  PubMed          Journal:  Biomol Concepts        ISSN: 1868-5021


  100 in total

1.  Small RNAs derived from snoRNAs.

Authors:  Ryan J Taft; Evgeny A Glazov; Timo Lassmann; Yoshihide Hayashizaki; Piero Carninci; John S Mattick
Journal:  RNA       Date:  2009-05-27       Impact factor: 4.942

2.  A novel class of small RNAs: tRNA-derived RNA fragments (tRFs).

Authors:  Yong Sun Lee; Yoshiyuki Shibata; Ankit Malhotra; Anindya Dutta
Journal:  Genes Dev       Date:  2009-11-15       Impact factor: 11.361

3.  Filtering of deep sequencing data reveals the existence of abundant Dicer-dependent small RNAs derived from tRNAs.

Authors:  Christian Cole; Andrew Sobala; Cheng Lu; Shawn R Thatcher; Andrew Bowman; John W S Brown; Pamela J Green; Geoffrey J Barton; Gyorgy Hutvagner
Journal:  RNA       Date:  2009-10-22       Impact factor: 4.942

4.  A mammalian herpesvirus uses noncanonical expression and processing mechanisms to generate viral MicroRNAs.

Authors:  Hal P Bogerd; Heather W Karnowski; Xuezhong Cai; Jinwook Shin; Michael Pohlers; Bryan R Cullen
Journal:  Mol Cell       Date:  2010-01-15       Impact factor: 17.970

5.  A high-resolution structure of the pre-microRNA nuclear export machinery.

Authors:  Chimari Okada; Eiki Yamashita; Soo Jae Lee; Satoshi Shibata; Jun Katahira; Atsushi Nakagawa; Yoshihiro Yoneda; Tomitake Tsukihara
Journal:  Science       Date:  2009-11-27       Impact factor: 47.728

Review 6.  Causes and consequences of microRNA dysregulation in cancer.

Authors:  Carlo M Croce
Journal:  Nat Rev Genet       Date:  2009-10       Impact factor: 53.242

7.  The DLEU2/miR-15a/16-1 cluster controls B cell proliferation and its deletion leads to chronic lymphocytic leukemia.

Authors:  Ulf Klein; Marie Lia; Marta Crespo; Rachael Siegel; Qiong Shen; Tongwei Mo; Alberto Ambesi-Impiombato; Andrea Califano; Anna Migliazza; Govind Bhagat; Riccardo Dalla-Favera
Journal:  Cancer Cell       Date:  2010-01-07       Impact factor: 31.743

8.  Evidence for X-chromosomal schizophrenia associated with microRNA alterations.

Authors:  Jinong Feng; Guihua Sun; Jin Yan; Katie Noltner; Wenyan Li; Carolyn H Buzin; Jeff Longmate; Leonard L Heston; John Rossi; Steve S Sommer
Journal:  PLoS One       Date:  2009-07-01       Impact factor: 3.240

9.  Pyrosequencing of small non-coding RNAs in HIV-1 infected cells: evidence for the processing of a viral-cellular double-stranded RNA hybrid.

Authors:  Man Lung Yeung; Yamina Bennasser; Koichi Watashi; Shu-Yun Le; Laurent Houzet; Kuan-Teh Jeang
Journal:  Nucleic Acids Res       Date:  2009-09-03       Impact factor: 16.971

10.  An endogenous positively selecting peptide enhances mature T cell responses and becomes an autoantigen in the absence of microRNA miR-181a.

Authors:  Peter J R Ebert; Shan Jiang; Jianming Xie; Qi-Jing Li; Mark M Davis
Journal:  Nat Immunol       Date:  2009-10-04       Impact factor: 25.606

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  31 in total

Review 1.  MicroRNA therapeutic targets in neonatal hypoxic-ischemic brain injury: a narrative review.

Authors:  Eric S Peeples
Journal:  Pediatr Res       Date:  2022-07-19       Impact factor: 3.953

Review 2.  The Emerging Role of Non-Coding RNAs in Osteogenic Differentiation of Human Bone Marrow Mesenchymal Stem Cells.

Authors:  Xiaoying Chen; Wei Xie; Ming Zhang; Yuhan Shi; Shaofen Xu; Haoyu Cheng; Lihong Wu; Janak L Pathak; Zhichao Zheng
Journal:  Front Cell Dev Biol       Date:  2022-05-16

Review 3.  The Tsetse Metabolic Gambit: Living on Blood by Relying on Symbionts Demands Synchronization.

Authors:  Mason H Lee; Miguel Medina Munoz; Rita V M Rio
Journal:  Front Microbiol       Date:  2022-06-09       Impact factor: 6.064

4.  Expression of microRNAs in human post-mortem amyotrophic lateral sclerosis spinal cords provides insight into disease mechanisms.

Authors:  Claudia Figueroa-Romero; Junguk Hur; J Simon Lunn; Ximena Paez-Colasante; Diane E Bender; Raymond Yung; Stacey A Sakowski; Eva L Feldman
Journal:  Mol Cell Neurosci       Date:  2015-12-17       Impact factor: 4.314

5.  Protocols for the Analysis of microRNA Expression, Biogenesis, and Function in Immune Cells.

Authors:  Nannan Zhang; Guowu Hu; Timothy G Myers; Peter R Williamson
Journal:  Curr Protoc Immunol       Date:  2019-09

Review 6.  Genetic variants in microRNA genes: impact on microRNA expression, function, and disease.

Authors:  Sophia Cammaerts; Mojca Strazisar; Peter De Rijk; Jurgen Del Favero
Journal:  Front Genet       Date:  2015-05-21       Impact factor: 4.599

Review 7.  A glance at subgenomic flavivirus RNAs and microRNAs in flavivirus infections.

Authors:  Lorena Bavia; Ana Luiza Pamplona Mosimann; Mateus Nóbrega Aoki; Claudia Nunes Duarte Dos Santos
Journal:  Virol J       Date:  2016-05-28       Impact factor: 4.099

Review 8.  tRNA-Derived Fragments (tRFs): Emerging New Roles for an Ancient RNA in the Regulation of Gene Expression.

Authors:  Simon P Keam; Gyorgy Hutvagner
Journal:  Life (Basel)       Date:  2015-11-27

Review 9.  Small RNAs in Circulating Exosomes of Cancer Patients: A Minireview.

Authors:  Stefania Bortoluzzi; Federica Lovisa; Enrico Gaffo; Lara Mussolin
Journal:  High Throughput       Date:  2017-10-06

Review 10.  Targeting microRNA to improve diagnostic and therapeutic approaches for malignant mesothelioma.

Authors:  Kimberly A Birnie; Cecilia M Prêle; Philip J Thompson; Bahareh Badrian; Steven E Mutsaers
Journal:  Oncotarget       Date:  2017-08-24
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